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The map label for this gene is ybjY [C]

Identifier: 113969205

GI number: 113969205

Start: 1013317

End: 1014579

Strand: Direct

Name: ybjY [C]

Synonym: Shewmr4_0861

Alternate gene names: 113969205

Gene position: 1013317-1014579 (Clockwise)

Preceding gene: 113969200

Following gene: 113969206

Centisome position: 21.53

GC content: 52.57

Gene sequence:

>1263_bases
ATGATTAAAGATACCAGCGGCCAAGATAAAGTCCTTGTGCCATCGACCGCCAAACGCCTCAAGTTGCCTCTAATGATTGG
CGGCTGCACCTTACTGGTTAGCGCCTTAGTGTGGGCCAGTTTTGGTAGCGATAAAGTCAGCCAGTCCATCAGCCGTAGCG
AGCTCACGACCGCAACTTTGTACGTTGGCACGCTCACTCGAGATGTGGCCACCACGGGCAAAATTGTTGCCGCCAATGCG
CCAATCCTCTACAGCACCGAAGAAGGCACAGTGACGCTACTGAGCAACCCAGGTGATAGCGTCAGCAAAGGTGATGTGGT
CGCAAAGCTGGACAGTCCAAGATTAACCAATCAATTAGAGCAGGCGAAATCGCTATTGGCGGGATTAGAGAGCGCCCTTG
AGCGTGCCAAGCTAGATGCCAGACGTAACCAATTACAAGTCAATCAAACCTTAGACATGGCCTCGGTCGATTTGGAAGCG
GCCGATCGGGAGAGCCGCCGTGGGGATTTATTGATCCAATCTAAACTGATCAGCCAAATCGACTATGAGAAGGGCAAGGA
CGATCTGCACAAGGCAAAACTCAAGTTTAAGCATGCGGAGCAGGAAGTGGCCTTAACCAAGGATACCTTAACCTTTGAGG
TGAAAAACAAGGCCTTGGAAGTGGAGCGTCAGAGTTTGGCGGTAAATGAGCTTGAGCGTCAGGTCGACGCCTTAAATATC
AAGGCGCCGGTGAGCGGCATTATTGGTAACTGGTTGACCGAGCAAAAAACGCGTCTGAGCGCCAATCAGCCCATCCTGAC
TGTGGTCGATTTAAGTGCCTATGAGGCCGAGTTGGCGGTGCCTGAATCCTACGCCGACGAGTTAGGGCTCGGAATGGAGG
TCGAACTGAGCTTCGGTGAAGTCAAACTCATGGGCAAGTTATCCTCGATTTCCCCCGAAGTGCGTAACCGTGAAGTGACC
GCCAGAGTGCAGTTTGTCCAGAGCGAAAGCTTGAAGCTGCGCCAAAACCAACGGATCTCCGCCAGAGTCTTACTCGAACA
CAGGGCGAATGTGTTGATGGTTAAACGCGGTGCCTTTATGACCAGCGGTGGCGGTGATGAGGTGTACCAAGTCGAAGGCG
ATATCGCTACCCGCCGCGAGATTAAGCTTGGCAGCACCAGCATGAGTCAGGTGGAAGTGATCGAAGGCGGTAAAGCGGGT
GACGAATGGGTGATCTCCAGTGTTGAGCCCTTTAACCATGCCGAACAGGTCAAAATGCATTGA

Upstream 100 bases:

>100_bases
ACGAAATTGGCATAGGCGTTGCTATTACTGGATATCGATTTTTAATAGTGTCCGTAGCGATGGGCCTATCCAGCCCTCCG
ACAGGGAAGCGAGAAACGCC

Downstream 100 bases:

>100_bases
TGACCGATAGTCAAAAATTACTTATTAATCAAATTGATGTAATTAACGCCGCTCTGGCTAAAAAGTATGCGGCTAAGGTG
TACAAGGAGTTCATTATGCG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; ABC Transporter Permease; HlyD Family Secretion Protein; Efflux Transporter Rnd Family Mfp Subunit; Efflux Transporter MFP Component RND Family; Secretion Protein HlyD; Efflux Transporter MFP Component RND Family Protein; ABC Transporter Component Protein; Efflux Transporter MFP Subunit; Membrane-Fusion Protein; Membrane Fusion Protein; ABC Transporter Permease Protein; Efflux Transporter; Hlyd Family Secretion Protein; HlyD Family Transporter Protein; HlyD Family Transporter; Efflux System

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MIKDTSGQDKVLVPSTAKRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATLYVGTLTRDVATTGKIVAANA
PILYSTEEGTVTLLSNPGDSVSKGDVVAKLDSPRLTNQLEQAKSLLAGLESALERAKLDARRNQLQVNQTLDMASVDLEA
ADRESRRGDLLIQSKLISQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQSLAVNELERQVDALNI
KAPVSGIIGNWLTEQKTRLSANQPILTVVDLSAYEAELAVPESYADELGLGMEVELSFGEVKLMGKLSSISPEVRNREVT
ARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFMTSGGGDEVYQVEGDIATRREIKLGSTSMSQVEVIEGGKAG
DEWVISSVEPFNHAEQVKMH

Sequences:

>Translated_420_residues
MIKDTSGQDKVLVPSTAKRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATLYVGTLTRDVATTGKIVAANA
PILYSTEEGTVTLLSNPGDSVSKGDVVAKLDSPRLTNQLEQAKSLLAGLESALERAKLDARRNQLQVNQTLDMASVDLEA
ADRESRRGDLLIQSKLISQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQSLAVNELERQVDALNI
KAPVSGIIGNWLTEQKTRLSANQPILTVVDLSAYEAELAVPESYADELGLGMEVELSFGEVKLMGKLSSISPEVRNREVT
ARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFMTSGGGDEVYQVEGDIATRREIKLGSTSMSQVEVIEGGKAG
DEWVISSVEPFNHAEQVKMH
>Mature_420_residues
MIKDTSGQDKVLVPSTAKRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATLYVGTLTRDVATTGKIVAANA
PILYSTEEGTVTLLSNPGDSVSKGDVVAKLDSPRLTNQLEQAKSLLAGLESALERAKLDARRNQLQVNQTLDMASVDLEA
ADRESRRGDLLIQSKLISQIDYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQSLAVNELERQVDALNI
KAPVSGIIGNWLTEQKTRLSANQPILTVVDLSAYEAELAVPESYADELGLGMEVELSFGEVKLMGKLSSISPEVRNREVT
ARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFMTSGGGDEVYQVEGDIATRREIKLGSTSMSQVEVIEGGKAG
DEWVISSVEPFNHAEQVKMH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45915; Mature: 45915

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDTSGQDKVLVPSTAKRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATL
CCCCCCCCCEEECCCCHHHEECCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEE
YVGTLTRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDSVSKGDVVAKLDSPRLTNQLE
EEEHHHHHHHCCCCEEEECCCEEEECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHH
QAKSLLAGLESALERAKLDARRNQLQVNQTLDMASVDLEAADRESRRGDLLIQSKLISQI
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCHHCCCCCCCCCEEEHHHHHHHH
DYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQSLAVNELERQVDALNI
CCCCCHHHHHHHHHHHHHCCHHHEEEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEE
KAPVSGIIGNWLTEQKTRLSANQPILTVVDLSAYEAELAVPESYADELGLGMEVELSFGE
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCEECCCHHHHHHHCCCEEEEEECCC
VKLMGKLSSISPEVRNREVTARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFM
EEEEEEHHHCCCHHHCCEEEEEEEEECCCCHHHHCCCCCHHHHEECCCCCEEEEECCCEE
TSGGGDEVYQVEGDIATRREIKLGSTSMSQVEVIEGGKAGDEWVISSVEPFNHAEQVKMH
ECCCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEECCCCCCCCHHCCCC
>Mature Secondary Structure
MIKDTSGQDKVLVPSTAKRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATL
CCCCCCCCCEEECCCCHHHEECCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEE
YVGTLTRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDSVSKGDVVAKLDSPRLTNQLE
EEEHHHHHHHCCCCEEEECCCEEEECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHH
QAKSLLAGLESALERAKLDARRNQLQVNQTLDMASVDLEAADRESRRGDLLIQSKLISQI
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCHHCCCCCCCCCEEEHHHHHHHH
DYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEVERQSLAVNELERQVDALNI
CCCCCHHHHHHHHHHHHHCCHHHEEEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEE
KAPVSGIIGNWLTEQKTRLSANQPILTVVDLSAYEAELAVPESYADELGLGMEVELSFGE
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCEECCCHHHHHHHCCCEEEEEECCC
VKLMGKLSSISPEVRNREVTARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFM
EEEEEEHHHCCCHHHCCEEEEEEEEECCCCHHHHCCCCCHHHHEECCCCCEEEEECCCEE
TSGGGDEVYQVEGDIATRREIKLGSTSMSQVEVIEGGKAGDEWVISSVEPFNHAEQVKMH
ECCCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEECCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA