Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113969206

Identifier: 113969206

GI number: 113969206

Start: 1014579

End: 1014950

Strand: Direct

Name: 113969206

Synonym: Shewmr4_0862

Alternate gene names: NA

Gene position: 1014579-1014950 (Clockwise)

Preceding gene: 113969205

Following gene: 113969207

Centisome position: 21.56

GC content: 46.51

Gene sequence:

>372_bases
ATGACCGATAGTCAAAAATTACTTATTAATCAAATTGATGTAATTAACGCCGCTCTGGCTAAAAAGTATGCGGCTAAGGT
GTACAAGGAGTTCATTATGCGTACTAAAAACGTCGATCTTGGTCTGCTGATGTCATCCAAATTGTTTGGTGTTCTGGCCT
TGGCCCTACTGGTCGTGGCGGTTGAGCTGGGCATAGGTGAGGCCAATAGCTGGTTTTTCCTCGGTTTAAATATTTTGGAA
TGGACGAATCCCCTAGAAGAGGCGCGCCAGGTGGGTGATGTCTCGATGGAAAGTGTGAGCTTTATATTCGCCTGTCTCAA
TGGGTTGTTCGATGCCTTGAGTGGGTTGGTGATGGGCCGTTTTGCGGGGTAA

Upstream 100 bases:

>100_bases
TGAGTCAGGTGGAAGTGATCGAAGGCGGTAAAGCGGGTGACGAATGGGTGATCTCCAGTGTTGAGCCCTTTAACCATGCC
GAACAGGTCAAAATGCATTG

Downstream 100 bases:

>100_bases
TGGCTTTGTGTTAGCCGTTACCGCTTAAAGATAAAGAAAATACTGGCGCGTTTTATAAGCCGTTTGCGCGCAAAGATAAA
AATTAATCAAGGAAATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTDSQKLLINQIDVINAALAKKYAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVAVELGIGEANSWFFLGLNILE
WTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGLVMGRFAG

Sequences:

>Translated_123_residues
MTDSQKLLINQIDVINAALAKKYAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVAVELGIGEANSWFFLGLNILE
WTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGLVMGRFAG
>Mature_122_residues
TDSQKLLINQIDVINAALAKKYAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVAVELGIGEANSWFFLGLNILEW
TNPLEEARQVGDVSMESVSFIFACLNGLFDALSGLVMGRFAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13419; Mature: 13288

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSQKLLINQIDVINAALAKKYAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VELGIGEANSWFFLGLNILEWTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGLVMGR
HHHCCCCCCCEEEEECHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAG
CCC
>Mature Secondary Structure 
TDSQKLLINQIDVINAALAKKYAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VELGIGEANSWFFLGLNILEWTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGLVMGR
HHHCCCCCCCEEEEECHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA