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The map label for this gene is btuF [H]

Identifier: 113969192

GI number: 113969192

Start: 1003380

End: 1004204

Strand: Direct

Name: btuF [H]

Synonym: Shewmr4_0848

Alternate gene names: 113969192

Gene position: 1003380-1004204 (Clockwise)

Preceding gene: 113969191

Following gene: 113969193

Centisome position: 21.32

GC content: 50.55

Gene sequence:

>825_bases
ATGTTCATGCGACGCTTTATTGCCCTCGGCCTGAGCTTGGCGCTGTTACCCATAGCGGCGATGGCCGAGCCTGCAAAACG
TATTATTGCGCTTTCGCCCCACGCGGTTGAAATGCTCTATGCCATTGGCGCGGGGGAGTCGATTGTGGCCGCGACAGATT
ATGCGGATTATCCCGAAGCGGCGAAAAAAATCCCCAGTATCGGGGGGTATTATGGGATCCAGATTGAGCGGGTATTAGAG
CTAAATCCCGATCTGATTGTGGTGTGGGACACGGGCAATAAAGCCGAGGATATCAACCAACTCAAAAGCTTAGGTTTTAA
ACTCTATAGCAGTTCCCCCAAGACCCTTGAGGATGTCGCCAAAGAAATTGAGGAGTTAGGAGCGCTCACGGGGCGCACAG
AGCAGGCGAGCCAAGTGGCGGCCGATTATCGCAATCAGCTGCTGCAATTACGCAGTGAGAATGCCGCGAAATCCGAGCCA
AAGGTGTTTTATCAGCTGTGGTCAACGCCGTTAATGACGGTCGCGAAAAACAGTTGGATCCAGCAAATCATCGGTGTGTG
TCACGGTAAAAATGTTTTTTACGATGCGGCGAGTGATTACCCGCAGGTGAGCTTGGAGAATGTGTTAATGACCTTGCCCG
AGGTGATTTTACAGAGCGAAGAGGAAGGCAATGTCAAAGGGGTTGATTGGAGCAAATGGACCGAAATTCCTGCGGTTAAA
AACCAGCATATTTATCAATTAAATGCCGACCTATTACACCGGGCAACGCCAAGGGCACTACTCGGTGTAAAGGCAGTCTG
TGATGCTTTGGATAAAGCGCGTTAA

Upstream 100 bases:

>100_bases
GCTGGGATCAAGACCCTAAATATCGGCCTAAAAACCTGCAGACCTACCTTGAGCAGTACGGCTGGCCAGAAGAATTCATC
GATTAAATATAAGGAATATC

Downstream 100 bases:

>100_bases
TCGCATATCACATATTATTCAATTTAATGCAATGTACTGTTTTATTGATATTTATCATCAAAATAATAAGGAAGTTCCAT
GCATACATTACTGACTTGTT

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MFMRRFIALGLSLALLPIAAMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYPEAAKKIPSIGGYYGIQIERVLE
LNPDLIVVWDTGNKAEDINQLKSLGFKLYSSSPKTLEDVAKEIEELGALTGRTEQASQVAADYRNQLLQLRSENAAKSEP
KVFYQLWSTPLMTVAKNSWIQQIIGVCHGKNVFYDAASDYPQVSLENVLMTLPEVILQSEEEGNVKGVDWSKWTEIPAVK
NQHIYQLNADLLHRATPRALLGVKAVCDALDKAR

Sequences:

>Translated_274_residues
MFMRRFIALGLSLALLPIAAMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYPEAAKKIPSIGGYYGIQIERVLE
LNPDLIVVWDTGNKAEDINQLKSLGFKLYSSSPKTLEDVAKEIEELGALTGRTEQASQVAADYRNQLLQLRSENAAKSEP
KVFYQLWSTPLMTVAKNSWIQQIIGVCHGKNVFYDAASDYPQVSLENVLMTLPEVILQSEEEGNVKGVDWSKWTEIPAVK
NQHIYQLNADLLHRATPRALLGVKAVCDALDKAR
>Mature_274_residues
MFMRRFIALGLSLALLPIAAMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYPEAAKKIPSIGGYYGIQIERVLE
LNPDLIVVWDTGNKAEDINQLKSLGFKLYSSSPKTLEDVAKEIEELGALTGRTEQASQVAADYRNQLLQLRSENAAKSEP
KVFYQLWSTPLMTVAKNSWIQQIIGVCHGKNVFYDAASDYPQVSLENVLMTLPEVILQSEEEGNVKGVDWSKWTEIPAVK
NQHIYQLNADLLHRATPRALLGVKAVCDALDKAR

Specific function: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=273, Percent_Identity=31.8681318681319, Blast_Score=150, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 30259; Mature: 30259

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMRRFIALGLSLALLPIAAMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYPEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCEEEECCCCCCCHH
AKKIPSIGGYYGIQIERVLELNPDLIVVWDTGNKAEDINQLKSLGFKLYSSSPKTLEDVA
HHHCCCCCCEECEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
KEIEELGALTGRTEQASQVAADYRNQLLQLRSENAAKSEPKVFYQLWSTPLMTVAKNSWI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHH
QQIIGVCHGKNVFYDAASDYPQVSLENVLMTLPEVILQSEEEGNVKGVDWSKWTEIPAVK
HHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC
NQHIYQLNADLLHRATPRALLGVKAVCDALDKAR
CCEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFMRRFIALGLSLALLPIAAMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYPEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCEEEECCCCCCCHH
AKKIPSIGGYYGIQIERVLELNPDLIVVWDTGNKAEDINQLKSLGFKLYSSSPKTLEDVA
HHHCCCCCCEECEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
KEIEELGALTGRTEQASQVAADYRNQLLQLRSENAAKSEPKVFYQLWSTPLMTVAKNSWI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHH
QQIIGVCHGKNVFYDAASDYPQVSLENVLMTLPEVILQSEEEGNVKGVDWSKWTEIPAVK
HHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC
NQHIYQLNADLLHRATPRALLGVKAVCDALDKAR
CCEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA