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The map label for this gene is recJ [H]

Identifier: 113969141

GI number: 113969141

Start: 931740

End: 933464

Strand: Direct

Name: recJ [H]

Synonym: Shewmr4_0797

Alternate gene names: 113969141

Gene position: 931740-933464 (Clockwise)

Preceding gene: 113969140

Following gene: 113969142

Centisome position: 19.8

GC content: 52.29

Gene sequence:

>1725_bases
TTGATCCATAAGATAGTCCGTCGTCCAACCGTTGATGATAGCCATTTACCCGCTCACCTTCCGCCGTTATTAAGACAGCT
TTACGCCCGCCGTGGTGTTATGCCCAACGAATGCGAACTGGTGCTCAAAGGCCTGTTAAGACCCGATACAATGAAGGGCT
TAGAACAAGCAGCTAAGCTAATTGCCGATGCGATGCAGCAGGATAAGTCGATACTGATCGTCGGCGATTTTGATGCCGAC
GGTGCTACCTCGACCAGTGTGTGTTTGTTAGCGCTGAGGATGATGGGCGCGAGCAAGGTCGATTATCTGATCCCCAATCG
TTTCGACTACGGTTATGGTCTGAGTCCTGAGATTGTCGCCGTGGCGGCATCCAAACAGGCAGAATTACTTATTACTGTAG
ATAACGGCATTTCCTCAATTGAGGGCGTGGCCGCCGCCAAAGCCTTTGGCATGCAGGTGGTGATCACCGACCATCACTTA
CCCGGCCATGAGTTACCGGCGGCCGATGCCATAGTGAATCCCAATCAGCCCGGTTGTCAGTTTGCCAGTAAATCCATTGC
TGGCGTCGGGGTCGCCTTTTATCTGATGACGGCGCTTAGGGCAGAGCTGCGCGCTCGTCATTGGTATCAAGCCCGCGGCA
TTGCTGAGCCTAATCTCGGTACTCTGCTGGATATTGTTGCCCTTGGCACTGTGGCCGACGTGGTGTCGCTCGATGCCAAC
AATCGTATTCTGGTCGAGGCGGGATTGCAGCGGGTACGCAGTGGTCGATGCCGTGTGGGCATTACCGCCTTACTCGAAGT
GGCCAAACGTAATCCTGCTCGCATTGTTGCCTCGGACTTTGGCTTTGCCGTGGGGCCTAGGCTTAATGCCGCTGGCAGAC
TGGATGAAATGGCGCTTGGCGTTGAAACCCTGCTGTGCGAAGACATCATGTATGCAAGGCGGATGGCGGCAGAACTCGAT
AGTCTCAACCAAGAGCGACGTGAGCTTGAGGTCGGGATGCAGCAAGAGGCGCTGAAAAGTCTTGAATATCTAAAGCTTAA
TGAAGAGCAACTTCCGTGGGGTATTGCCCTCTTTCAAGAGGATTGGCACCAAGGGGTTATCGGTATTCTTGCTTCGCGGA
TTAAAGATAAATACCACAGACCCGTTATCGCCTTTGCCGATGCGGGTAATGGTGAAATTAAAGGCTCGGCGCGCTCCATC
AAAGGCTTGCATATGCGCGATCTACTGGAGTTGGTTAACTCGCGCCATCCTGGGCTTATCAGCAAATTTGGCGGCCATGC
AATGGCGGCGGGCTTGACTTTAAAGTCCGGTGGCTTCGCAACCTTTGCTAAAGCCTATGATGATGCGGTACGTGAACTGT
TAAAGCCTGAGCAGCTCACGGGTGAGCTTTGGTCCGATGGTGAATTAACACCGACGGAACTTACCCTCGAAATCGCCCAG
TTACTGCGTAATGCCGGACCTTGGGGTCAGTCTTTCGAGGAGCCATTATTCGATGGTTATTTTAAGATTATCCAGCAGCG
GATCGTGGGGGAGCGCCACCTTAAATTAGTGCTTGAAACCCCATGCAGTACCGTGATGTTAGACGCGATTGCTTTTAATG
TGGATTTACACACTTGGCCCGATGCGACGATTCAACATGCGTGCATCGTCTATAAGCTGGATGTGAACGAATATCGCGGT
AATTTCACCCTGCAGTTGATGGTCGAGCAAATCGAGCCAATGTAG

Upstream 100 bases:

>100_bases
GCAAATAATCCTGTTTCGGATAAATTTATCCCATTAAAGGTGAGCTTAAGGCTCACCTTTTTGTTATCTTAGCCCCATGA
TTGCTTAAGAGTTTGCTCCC

Downstream 100 bases:

>100_bases
TCAGTGATTGCGTGGAAGTAAGATGAAAAGGAGTTCAGTTGAAGCCGTTATCGGATAAAAAAATTCGTCAGTTACTCAAG
CGTTTTGCCTGGATATATGC

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MIHKIVRRPTVDDSHLPAHLPPLLRQLYARRGVMPNECELVLKGLLRPDTMKGLEQAAKLIADAMQQDKSILIVGDFDAD
GATSTSVCLLALRMMGASKVDYLIPNRFDYGYGLSPEIVAVAASKQAELLITVDNGISSIEGVAAAKAFGMQVVITDHHL
PGHELPAADAIVNPNQPGCQFASKSIAGVGVAFYLMTALRAELRARHWYQARGIAEPNLGTLLDIVALGTVADVVSLDAN
NRILVEAGLQRVRSGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALGVETLLCEDIMYARRMAAELD
SLNQERRELEVGMQQEALKSLEYLKLNEEQLPWGIALFQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGEIKGSARSI
KGLHMRDLLELVNSRHPGLISKFGGHAMAAGLTLKSGGFATFAKAYDDAVRELLKPEQLTGELWSDGELTPTELTLEIAQ
LLRNAGPWGQSFEEPLFDGYFKIIQQRIVGERHLKLVLETPCSTVMLDAIAFNVDLHTWPDATIQHACIVYKLDVNEYRG
NFTLQLMVEQIEPM

Sequences:

>Translated_574_residues
MIHKIVRRPTVDDSHLPAHLPPLLRQLYARRGVMPNECELVLKGLLRPDTMKGLEQAAKLIADAMQQDKSILIVGDFDAD
GATSTSVCLLALRMMGASKVDYLIPNRFDYGYGLSPEIVAVAASKQAELLITVDNGISSIEGVAAAKAFGMQVVITDHHL
PGHELPAADAIVNPNQPGCQFASKSIAGVGVAFYLMTALRAELRARHWYQARGIAEPNLGTLLDIVALGTVADVVSLDAN
NRILVEAGLQRVRSGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALGVETLLCEDIMYARRMAAELD
SLNQERRELEVGMQQEALKSLEYLKLNEEQLPWGIALFQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGEIKGSARSI
KGLHMRDLLELVNSRHPGLISKFGGHAMAAGLTLKSGGFATFAKAYDDAVRELLKPEQLTGELWSDGELTPTELTLEIAQ
LLRNAGPWGQSFEEPLFDGYFKIIQQRIVGERHLKLVLETPCSTVMLDAIAFNVDLHTWPDATIQHACIVYKLDVNEYRG
NFTLQLMVEQIEPM
>Mature_574_residues
MIHKIVRRPTVDDSHLPAHLPPLLRQLYARRGVMPNECELVLKGLLRPDTMKGLEQAAKLIADAMQQDKSILIVGDFDAD
GATSTSVCLLALRMMGASKVDYLIPNRFDYGYGLSPEIVAVAASKQAELLITVDNGISSIEGVAAAKAFGMQVVITDHHL
PGHELPAADAIVNPNQPGCQFASKSIAGVGVAFYLMTALRAELRARHWYQARGIAEPNLGTLLDIVALGTVADVVSLDAN
NRILVEAGLQRVRSGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALGVETLLCEDIMYARRMAAELD
SLNQERRELEVGMQQEALKSLEYLKLNEEQLPWGIALFQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGEIKGSARSI
KGLHMRDLLELVNSRHPGLISKFGGHAMAAGLTLKSGGFATFAKAYDDAVRELLKPEQLTGELWSDGELTPTELTLEIAQ
LLRNAGPWGQSFEEPLFDGYFKIIQQRIVGERHLKLVLETPCSTVMLDAIAFNVDLHTWPDATIQHACIVYKLDVNEYRG
NFTLQLMVEQIEPM

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=571, Percent_Identity=57.2679509632224, Blast_Score=675, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62992; Mature: 62992

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHKIVRRPTVDDSHLPAHLPPLLRQLYARRGVMPNECELVLKGLLRPDTMKGLEQAAKL
CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
IADAMQQDKSILIVGDFDADGATSTSVCLLALRMMGASKVDYLIPNRFDYGYGLSPEIVA
HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEE
VAASKQAELLITVDNGISSIEGVAAAKAFGMQVVITDHHLPGHELPAADAIVNPNQPGCQ
EEECCCCEEEEEECCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
FASKSIAGVGVAFYLMTALRAELRARHWYQARGIAEPNLGTLLDIVALGTVADVVSLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVEAGLQRVRSGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALG
CEEEHHHHHHHHHCCCCEEHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCCHHHHHHH
VETLLCEDIMYARRMAAELDSLNQERRELEVGMQQEALKSLEYLKLNEEQLPWGIALFQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
DWHQGVIGILASRIKDKYHRPVIAFADAGNGEIKGSARSIKGLHMRDLLELVNSRHPGLI
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCHH
SKFGGHAMAAGLTLKSGGFATFAKAYDDAVRELLKPEQLTGELWSDGELTPTELTLEIAQ
HHHCCCHHEECEEECCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHH
LLRNAGPWGQSFEEPLFDGYFKIIQQRIVGERHLKLVLETPCSTVMLDAIAFNVDLHTWP
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHEEEEEECCC
DATIQHACIVYKLDVNEYRGNFTLQLMVEQIEPM
CCHHCCEEEEEEEEHHHHCCCEEEEEEEHHHCCC
>Mature Secondary Structure
MIHKIVRRPTVDDSHLPAHLPPLLRQLYARRGVMPNECELVLKGLLRPDTMKGLEQAAKL
CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
IADAMQQDKSILIVGDFDADGATSTSVCLLALRMMGASKVDYLIPNRFDYGYGLSPEIVA
HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEE
VAASKQAELLITVDNGISSIEGVAAAKAFGMQVVITDHHLPGHELPAADAIVNPNQPGCQ
EEECCCCEEEEEECCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
FASKSIAGVGVAFYLMTALRAELRARHWYQARGIAEPNLGTLLDIVALGTVADVVSLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVEAGLQRVRSGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALG
CEEEHHHHHHHHHCCCCEEHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCCHHHHHHH
VETLLCEDIMYARRMAAELDSLNQERRELEVGMQQEALKSLEYLKLNEEQLPWGIALFQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
DWHQGVIGILASRIKDKYHRPVIAFADAGNGEIKGSARSIKGLHMRDLLELVNSRHPGLI
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCHH
SKFGGHAMAAGLTLKSGGFATFAKAYDDAVRELLKPEQLTGELWSDGELTPTELTLEIAQ
HHHCCCHHEECEEECCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHH
LLRNAGPWGQSFEEPLFDGYFKIIQQRIVGERHLKLVLETPCSTVMLDAIAFNVDLHTWP
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHEEEEEECCC
DATIQHACIVYKLDVNEYRGNFTLQLMVEQIEPM
CCHHCCEEEEEEEEHHHHCCCEEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]