| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969142
Identifier: 113969142
GI number: 113969142
Start: 933503
End: 933832
Strand: Direct
Name: 113969142
Synonym: Shewmr4_0798
Alternate gene names: NA
Gene position: 933503-933832 (Clockwise)
Preceding gene: 113969141
Following gene: 113969143
Centisome position: 19.84
GC content: 42.73
Gene sequence:
>330_bases TTGAAGCCGTTATCGGATAAAAAAATTCGTCAGTTACTCAAGCGTTTTGCCTGGATATATGCGGCGTTTTTGAGTATTCC CTTTCTGTCAGCACTTTTGACGACCAAGGAACAGGGCCAAATGCTGATTATCGGCATTTGGCCTGCGGCTTCACTGCTTT ACTTTTTGGCTTATCGTCATCTCGCCCATTTATTTAAATATGAAATCAATCGCCACTTGGCATTTACTAACCATGGCGGC GGCACTCTGGCAGGAGCCTTGTATTCATTAGCTAAATTAGTGTTATTTGCCATGGCTTTCATGTTATTGGTAAGCGTCAA CAACAGCTAA
Upstream 100 bases:
>100_bases TGAACGAATATCGCGGTAATTTCACCCTGCAGTTGATGGTCGAGCAAATCGAGCCAATGTAGTCAGTGATTGCGTGGAAG TAAGATGAAAAGGAGTTCAG
Downstream 100 bases:
>100_bases ATCGAGGCGAGTGATGGAATACCGGGTCAGCACAGCGCAAACGGAAATGGATTTTGAGCTTATCCATGGTTTTATTTACA ACAGTTATTGGGCGCAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKPLSDKKIRQLLKRFAWIYAAFLSIPFLSALLTTKEQGQMLIIGIWPAASLLYFLAYRHLAHLFKYEINRHLAFTNHGG GTLAGALYSLAKLVLFAMAFMLLVSVNNS
Sequences:
>Translated_109_residues MKPLSDKKIRQLLKRFAWIYAAFLSIPFLSALLTTKEQGQMLIIGIWPAASLLYFLAYRHLAHLFKYEINRHLAFTNHGG GTLAGALYSLAKLVLFAMAFMLLVSVNNS >Mature_109_residues MKPLSDKKIRQLLKRFAWIYAAFLSIPFLSALLTTKEQGQMLIIGIWPAASLLYFLAYRHLAHLFKYEINRHLAFTNHGG GTLAGALYSLAKLVLFAMAFMLLVSVNNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12302; Mature: 12302
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLSDKKIRQLLKRFAWIYAAFLSIPFLSALLTTKEQGQMLIIGIWPAASLLYFLAYRH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH LAHLFKYEINRHLAFTNHGGGTLAGALYSLAKLVLFAMAFMLLVSVNNS HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPLSDKKIRQLLKRFAWIYAAFLSIPFLSALLTTKEQGQMLIIGIWPAASLLYFLAYRH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH LAHLFKYEINRHLAFTNHGGGTLAGALYSLAKLVLFAMAFMLLVSVNNS HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA