| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969099
Identifier: 113969099
GI number: 113969099
Start: 878445
End: 878762
Strand: Direct
Name: 113969099
Synonym: Shewmr4_0755
Alternate gene names: NA
Gene position: 878445-878762 (Clockwise)
Preceding gene: 113969097
Following gene: 113969100
Centisome position: 18.67
GC content: 40.57
Gene sequence:
>318_bases TTGAAAAGGCTAGCCATAGCATTACTTATCAGTTTCTCCCTTAGTGCATGTTCTTCACTCAATGAAATTAAATTAGACGC TCAATCGGCACCCAGTTATATCGGCGAAAAAGTCAAAGTCACCACTGTATCGGGTAAACAGGTGGAATTTACCGTCGAAA GAGTGACTGATCAGCAGATTGAGGGAGAAGGAAAAGAAGTCAAAATTGAAGAGATACAAACATTGGAGGTTGAAGAGTTT AGCCCGCTAAAATCGATATCACTCACAGCGGGTTTATATATGTTGGGTGCGGTAATTATTGCCGTTGTGGTGTTATAA
Upstream 100 bases:
>100_bases ACGAGCGGAATTTCGTAAGTTGAATCGTCTTATCTAAGTACTTATGCCTATAGGTATTATTTAATCATGGATTCAACCGT TTGTAGGATAGGAGGTTCGT
Downstream 100 bases:
>100_bases CGAATTATCAATTGCTTCCTAACTGGCACTCCAAACCTCAAGTCACACTTAAGGTGTGCCTGTGATAAGCTGCCGCTTTC TAATCAGGCTGTATTTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MKRLAIALLISFSLSACSSLNEIKLDAQSAPSYIGEKVKVTTVSGKQVEFTVERVTDQQIEGEGKEVKIEEIQTLEVEEF SPLKSISLTAGLYMLGAVIIAVVVL
Sequences:
>Translated_105_residues MKRLAIALLISFSLSACSSLNEIKLDAQSAPSYIGEKVKVTTVSGKQVEFTVERVTDQQIEGEGKEVKIEEIQTLEVEEF SPLKSISLTAGLYMLGAVIIAVVVL >Mature_105_residues MKRLAIALLISFSLSACSSLNEIKLDAQSAPSYIGEKVKVTTVSGKQVEFTVERVTDQQIEGEGKEVKIEEIQTLEVEEF SPLKSISLTAGLYMLGAVIIAVVVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11372; Mature: 11372
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLAIALLISFSLSACSSLNEIKLDAQSAPSYIGEKVKVTTVSGKQVEFTVERVTDQQI CCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCEEEEEEECCCEEEEEHHHHCCHHC EGEGKEVKIEEIQTLEVEEFSPLKSISLTAGLYMLGAVIIAVVVL CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRLAIALLISFSLSACSSLNEIKLDAQSAPSYIGEKVKVTTVSGKQVEFTVERVTDQQI CCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCEEEEEEECCCEEEEEHHHHCCHHC EGEGKEVKIEEIQTLEVEEFSPLKSISLTAGLYMLGAVIIAVVVL CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA