| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969067
Identifier: 113969067
GI number: 113969067
Start: 842865
End: 845372
Strand: Direct
Name: 113969067
Synonym: Shewmr4_0723
Alternate gene names: NA
Gene position: 842865-845372 (Clockwise)
Preceding gene: 113969064
Following gene: 113969076
Centisome position: 17.91
GC content: 51.87
Gene sequence:
>2508_bases ATGTCGATAAAACTCTCACCACTGGCGTTAGCAATTGCAGGAGCGATGACACTGTCAGCCGTGCCCGCTATGGCAAAAGA TGCCCCTGTCTATGAAAAAGATGCCATTCTCGTGGTGTATAAAGACAATGCGACGAAGGCGGAGCGCTCGGCGGCTCAGC GTTTAATTCGTGGCACCTTAACCGATGCCAATGCGGACGGTGTCGATGATAAGTTCCAGCATTTACTCAATGGCAAATTG GCACGTTTAGCCCTGCGTAAGGGCGCCAATATTGAAGATGCGATTAAGGTGATTAGCCGTCATCCGGCGGTGAAATATGC CGAACCTAACTATATTCTTAAGGCGATAGGCACGCCTGACGATCCAAGCTTTGCTAGCCTGTGGGGCATGAATAACACGG GACAAAACGGTGGCACCGTCGATGCGGATATCGATGCACCAGAAGCGTGGGAAATCACTACCGGCAGTTCGGATGTGGTG ATTGGGGTGATTGACACTGGGGTGGATTACAATCATCCCGATCTACAGACCAACATGTGGGTGAATGGTGGCGAGATCCC GGGTAACGGTATCGACGATGACGGCAACGGCGTGATCGACGATGTTCATGGTTACAGCGCGGTCAACAATAACGGTAACC CAATGGACGGTAACGGCCACGGTACACATGTGTCTGGCACTATTGGCGCTAAAGGCAATAACGGCGTGGGTGTCGTTGGG GTGAACTGGGACGTTAAAATCGCCGCCTGTCAGTTCCTCGATGCCGATGGTTATGGTTCTACCGCAGGCGCGATTGCCTG TTTGGACTACTTTACCGATCTTAAGGTTAATCATGGCGTGGATATCAAAGCTACCAACAACTCTTGGGGCGGCGGCAGCT TTAGCCAAGCATTAAAAGATGCGATTGAAGCGGGTGGTGAAGCAGGCATTTTATTTGTTGCAGCAGCAGGTAACGATGCG GTCGATAACGATGCCAGCCCACATTATCCCTCAAGCTACGATTCGGATGTGGTGTTGTCTATTGCCAGTACCGACCGTAA TGACCGTATGTCAGATTTCTCCCAGTGGGGCTTAACCAGTGTTGATATGGGCGCGCCTGGCACGGCGATTCTGTCAACCA TCCCAGGCGGTGGCTATGCCACTTACTCTGGTACCTCAATGGCGACGCCCCACGTGACAGGTGCGGCGGCACTCGTGTGG TCATTAAATCCAGATCTCTCGCCAGTAGAAATGAAATCCTTACTGATGGCGTCGGGTGATGCGAATGCGGACCTCACTGC TAAAACCGTGGCAGGTACGCGCCTCAATGTGGCAAATGCCTTAGAGCAGGCAAACCCATCTCCTAGCTATAAGTTTACAG TATCGCCAGCATCGCAATCGGTGGAAGCGGGTAACACGGCAAGTTATAACTTTAGTGTCGGTAGTGTGGCAGGGTGGGAA GGTGATGTGGCTCTTAGCGTAGCCGTGTCTCCAGCGCTTGAAGGCGTATCCTTATCAGCCTCAACTGTTTCTGCGGGTGG TTCATTTACCTTAGATGTTGCGACAACGGCGCAAACTGCTTGGGGTGATTACAGCATCACAGTAACAGGTACCGATGGCA CCATTGAAAAGTCTAAAGTCGTTTCACTGAATGTGTTCCCTCAGGGATTAAATGACTTTAGCTATGGCAATGAAAACGCT GTTGCTATCCCTGATAACAACGCTAATGGCGTGGTGAGCACTATCGACGTGACCGACGATGTGCAGATTTTTGGTGTGAC CGCCGATGTGAATATCAGCCACACTTGGATTGGTGACTTACGTGTCGTGTTAACCTCTCCAGCGGGTACCGAAGTGGTTC TGCATAACCGTGAGGGCGGCAGCGCCGACAACATCGTTAAGAGCTGGGACTTAAGCGCGTTTGACGGTGAAAATGCCCAG GGTACTTGGTCATTATCTGTTGACGACAATGCGGGCGCGGACACGGGGACCCTGAATAACTGGGGCTTAGTGATCAGCGG TTTAGGTGAAGCCTCTCCTGCGGCACCTGTTGCAGGTTTCGAGTATGCGGTTGAAGGCTTAAGCGTTGCCTTTACTAACA CTAGTACCGATGCAAACGATGATATCGTGAGCTATAGCTGGGATTTTGGTGATGACACAAACTCTAGTGAAATGAACCCA AGCCATGTGTTTGCTGCCGCTGGTACCTACAGAGTGTCGCTTACCGTGACTGACGCCATGGAGCATAGCAACACTGTGAC CATGGAAGTGCAAGTGTATGAGCATAGCATCAGTGCTGCTGTGACTCGTGCGTTAGTCTCTCGCCGTGGCAGTGCTATGG TTGACCTCACATGGGATAGCGCTTTAGGTGAAAGCGTCGCCCTGTACCGTGATGGCGAGTTAGTGGCCACGACTGAAAAC GATGGTAACTACCGCGATCGCTTCACAACGACGGCATCGAGTGTGACGTACCAAGTGTGTGAAACCACAGGCTCACTCTG TTCTGCGGCGGTTGTCGCGCAGTTCTAA
Upstream 100 bases:
>100_bases ACATACTGGATGTTCGTCGCTATTATCCAATCAATTTTGAGCGGAGGCTGCGTAATTGCGGTTCCAGAATTTCAACGTAA AGGACTATAGGAAGCTCAAT
Downstream 100 bases:
>100_bases TGAAGCCATAAATTAACAAGGCGACCCTAGGGTCGCCTTTTTTGTTCTCTAGACTCGAAAGCTAAGGTTTTTCTTTCACT TCCTCAGGCTCGGTTTCGGC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MSIKLSPLALAIAGAMTLSAVPAMAKDAPVYEKDAILVVYKDNATKAERSAAQRLIRGTLTDANADGVDDKFQHLLNGKL ARLALRKGANIEDAIKVISRHPAVKYAEPNYILKAIGTPDDPSFASLWGMNNTGQNGGTVDADIDAPEAWEITTGSSDVV IGVIDTGVDYNHPDLQTNMWVNGGEIPGNGIDDDGNGVIDDVHGYSAVNNNGNPMDGNGHGTHVSGTIGAKGNNGVGVVG VNWDVKIAACQFLDADGYGSTAGAIACLDYFTDLKVNHGVDIKATNNSWGGGSFSQALKDAIEAGGEAGILFVAAAGNDA VDNDASPHYPSSYDSDVVLSIASTDRNDRMSDFSQWGLTSVDMGAPGTAILSTIPGGGYATYSGTSMATPHVTGAAALVW SLNPDLSPVEMKSLLMASGDANADLTAKTVAGTRLNVANALEQANPSPSYKFTVSPASQSVEAGNTASYNFSVGSVAGWE GDVALSVAVSPALEGVSLSASTVSAGGSFTLDVATTAQTAWGDYSITVTGTDGTIEKSKVVSLNVFPQGLNDFSYGNENA VAIPDNNANGVVSTIDVTDDVQIFGVTADVNISHTWIGDLRVVLTSPAGTEVVLHNREGGSADNIVKSWDLSAFDGENAQ GTWSLSVDDNAGADTGTLNNWGLVISGLGEASPAAPVAGFEYAVEGLSVAFTNTSTDANDDIVSYSWDFGDDTNSSEMNP SHVFAAAGTYRVSLTVTDAMEHSNTVTMEVQVYEHSISAAVTRALVSRRGSAMVDLTWDSALGESVALYRDGELVATTEN DGNYRDRFTTTASSVTYQVCETTGSLCSAAVVAQF
Sequences:
>Translated_835_residues MSIKLSPLALAIAGAMTLSAVPAMAKDAPVYEKDAILVVYKDNATKAERSAAQRLIRGTLTDANADGVDDKFQHLLNGKL ARLALRKGANIEDAIKVISRHPAVKYAEPNYILKAIGTPDDPSFASLWGMNNTGQNGGTVDADIDAPEAWEITTGSSDVV IGVIDTGVDYNHPDLQTNMWVNGGEIPGNGIDDDGNGVIDDVHGYSAVNNNGNPMDGNGHGTHVSGTIGAKGNNGVGVVG VNWDVKIAACQFLDADGYGSTAGAIACLDYFTDLKVNHGVDIKATNNSWGGGSFSQALKDAIEAGGEAGILFVAAAGNDA VDNDASPHYPSSYDSDVVLSIASTDRNDRMSDFSQWGLTSVDMGAPGTAILSTIPGGGYATYSGTSMATPHVTGAAALVW SLNPDLSPVEMKSLLMASGDANADLTAKTVAGTRLNVANALEQANPSPSYKFTVSPASQSVEAGNTASYNFSVGSVAGWE GDVALSVAVSPALEGVSLSASTVSAGGSFTLDVATTAQTAWGDYSITVTGTDGTIEKSKVVSLNVFPQGLNDFSYGNENA VAIPDNNANGVVSTIDVTDDVQIFGVTADVNISHTWIGDLRVVLTSPAGTEVVLHNREGGSADNIVKSWDLSAFDGENAQ GTWSLSVDDNAGADTGTLNNWGLVISGLGEASPAAPVAGFEYAVEGLSVAFTNTSTDANDDIVSYSWDFGDDTNSSEMNP SHVFAAAGTYRVSLTVTDAMEHSNTVTMEVQVYEHSISAAVTRALVSRRGSAMVDLTWDSALGESVALYRDGELVATTEN DGNYRDRFTTTASSVTYQVCETTGSLCSAAVVAQF >Mature_834_residues SIKLSPLALAIAGAMTLSAVPAMAKDAPVYEKDAILVVYKDNATKAERSAAQRLIRGTLTDANADGVDDKFQHLLNGKLA RLALRKGANIEDAIKVISRHPAVKYAEPNYILKAIGTPDDPSFASLWGMNNTGQNGGTVDADIDAPEAWEITTGSSDVVI GVIDTGVDYNHPDLQTNMWVNGGEIPGNGIDDDGNGVIDDVHGYSAVNNNGNPMDGNGHGTHVSGTIGAKGNNGVGVVGV NWDVKIAACQFLDADGYGSTAGAIACLDYFTDLKVNHGVDIKATNNSWGGGSFSQALKDAIEAGGEAGILFVAAAGNDAV DNDASPHYPSSYDSDVVLSIASTDRNDRMSDFSQWGLTSVDMGAPGTAILSTIPGGGYATYSGTSMATPHVTGAAALVWS LNPDLSPVEMKSLLMASGDANADLTAKTVAGTRLNVANALEQANPSPSYKFTVSPASQSVEAGNTASYNFSVGSVAGWEG DVALSVAVSPALEGVSLSASTVSAGGSFTLDVATTAQTAWGDYSITVTGTDGTIEKSKVVSLNVFPQGLNDFSYGNENAV AIPDNNANGVVSTIDVTDDVQIFGVTADVNISHTWIGDLRVVLTSPAGTEVVLHNREGGSADNIVKSWDLSAFDGENAQG TWSLSVDDNAGADTGTLNNWGLVISGLGEASPAAPVAGFEYAVEGLSVAFTNTSTDANDDIVSYSWDFGDDTNSSEMNPS HVFAAAGTYRVSLTVTDAMEHSNTVTMEVQVYEHSISAAVTRALVSRRGSAMVDLTWDSALGESVALYRDGELVATTEND GNYRDRFTTTASSVTYQVCETTGSLCSAAVVAQF
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI20336244, Length=454, Percent_Identity=25.9911894273128, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI76443679, Length=343, Percent_Identity=25.0728862973761, Blast_Score=73, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983555, Length=581, Percent_Identity=23.0636833046472, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25141268, Length=326, Percent_Identity=24.5398773006135, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320775, Length=443, Percent_Identity=29.1196388261851, Blast_Score=111, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6324576, Length=380, Percent_Identity=30.7894736842105, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=361, Percent_Identity=26.8698060941828, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI17136192, Length=334, Percent_Identity=27.2455089820359, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 86424; Mature: 86293
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS00018 EF_HAND_1 ; PS50093 PKD ; PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKLSPLALAIAGAMTLSAVPAMAKDAPVYEKDAILVVYKDNATKAERSAAQRLIRGTL CCEEECHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC TDANADGVDDKFQHLLNGKLARLALRKGANIEDAIKVISRHPAVKYAEPNYILKAIGTPD CCCCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCEEEEECCCCC DPSFASLWGMNNTGQNGGTVDADIDAPEAWEITTGSSDVVIGVIDTGVDYNHPDLQTNMW CCCHHEECCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCEEEE VNGGEIPGNGIDDDGNGVIDDVHGYSAVNNNGNPMDGNGHGTHVSGTIGAKGNNGVGVVG EECCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEE VNWDVKIAACQFLDADGYGSTAGAIACLDYFTDLKVNHGVDIKATNNSWGGGSFSQALKD ECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCEECCCEEEEECCCCCCCCHHHHHHHH AIEAGGEAGILFVAAAGNDAVDNDASPHYPSSYDSDVVLSIASTDRNDRMSDFSQWGLTS HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCE VDMGAPGTAILSTIPGGGYATYSGTSMATPHVTGAAALVWSLNPDLSPVEMKSLLMASGD ECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEECCC ANADLTAKTVAGTRLNVANALEQANPSPSYKFTVSPASQSVEAGNTASYNFSVGSVAGWE CCCCEEEEEECCCEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCC GDVALSVAVSPALEGVSLSASTVSAGGSFTLDVATTAQTAWGDYSITVTGTDGTIEKSKV CCEEEEEEECCCCCCCEEECEEECCCCEEEEEEEECCEECCCCEEEEEECCCCCCCCCEE VSLNVFPQGLNDFSYGNENAVAIPDNNANGVVSTIDVTDDVQIFGVTADVNISHTWIGDL EEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEEEECEEEEEEECCE RVVLTSPAGTEVVLHNREGGSADNIVKSWDLSAFDGENAQGTWSLSVDDNAGADTGTLNN EEEEECCCCCEEEEECCCCCCHHCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC WGLVISGLGEASPAAPVAGFEYAVEGLSVAFTNTSTDANDDIVSYSWDFGDDTNSSEMNP CCEEEEECCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC SHVFAAAGTYRVSLTVTDAMEHSNTVTMEVQVYEHSISAAVTRALVSRRGSAMVDLTWDS CEEEEECCEEEEEEEEEEHHCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEECC ALGESVALYRDGELVATTENDGNYRDRFTTTASSVTYQVCETTGSLCSAAVVAQF CCCCEEEEEECCEEEEEECCCCCCCCEEEECHHHEEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure SIKLSPLALAIAGAMTLSAVPAMAKDAPVYEKDAILVVYKDNATKAERSAAQRLIRGTL CEEECHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC TDANADGVDDKFQHLLNGKLARLALRKGANIEDAIKVISRHPAVKYAEPNYILKAIGTPD CCCCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCEEEEECCCCC DPSFASLWGMNNTGQNGGTVDADIDAPEAWEITTGSSDVVIGVIDTGVDYNHPDLQTNMW CCCHHEECCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCEEEE VNGGEIPGNGIDDDGNGVIDDVHGYSAVNNNGNPMDGNGHGTHVSGTIGAKGNNGVGVVG EECCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEE VNWDVKIAACQFLDADGYGSTAGAIACLDYFTDLKVNHGVDIKATNNSWGGGSFSQALKD ECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCEECCCEEEEECCCCCCCCHHHHHHHH AIEAGGEAGILFVAAAGNDAVDNDASPHYPSSYDSDVVLSIASTDRNDRMSDFSQWGLTS HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCE VDMGAPGTAILSTIPGGGYATYSGTSMATPHVTGAAALVWSLNPDLSPVEMKSLLMASGD ECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEECCC ANADLTAKTVAGTRLNVANALEQANPSPSYKFTVSPASQSVEAGNTASYNFSVGSVAGWE CCCCEEEEEECCCEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCC GDVALSVAVSPALEGVSLSASTVSAGGSFTLDVATTAQTAWGDYSITVTGTDGTIEKSKV CCEEEEEEECCCCCCCEEECEEECCCCEEEEEEEECCEECCCCEEEEEECCCCCCCCCEE VSLNVFPQGLNDFSYGNENAVAIPDNNANGVVSTIDVTDDVQIFGVTADVNISHTWIGDL EEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEEEECEEEEEEECCE RVVLTSPAGTEVVLHNREGGSADNIVKSWDLSAFDGENAQGTWSLSVDDNAGADTGTLNN EEEEECCCCCEEEEECCCCCCHHCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC WGLVISGLGEASPAAPVAGFEYAVEGLSVAFTNTSTDANDDIVSYSWDFGDDTNSSEMNP CCEEEEECCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC SHVFAAAGTYRVSLTVTDAMEHSNTVTMEVQVYEHSISAAVTRALVSRRGSAMVDLTWDS CEEEEECCEEEEEEEEEEHHCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEECC ALGESVALYRDGELVATTENDGNYRDRFTTTASSVTYQVCETTGSLCSAAVVAQF CCCCEEEEEECCEEEEEECCCCCCCCEEEECHHHEEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]