| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969005
Identifier: 113969005
GI number: 113969005
Start: 771521
End: 772291
Strand: Direct
Name: 113969005
Synonym: Shewmr4_0661
Alternate gene names: NA
Gene position: 771521-772291 (Clockwise)
Preceding gene: 113969003
Following gene: 113969007
Centisome position: 16.39
GC content: 48.25
Gene sequence:
>771_bases ATGAAAAGTAATGTTAGGACGACATTTTTCAGCTTCGCAAAGGGACATTTGCTTGCACCTTGGCTCGTGTTTGCGGTGAT TATTTTTTGGCTCGAATTGACCCATGCCGATATGCGATTCGCCAGCATGTTATTTCACTGGCAGGGTGGTGTCGATTCTT GGCCACTGCGTGGCCATTGGTTGACTGAGAATTTGCTGCATGTCACTGGGCGAAACCTGGTTATTTTGCTTGCCGTTGTC GTGGTTAGCTGTATTGGTTTAAGCTTTCGCGTCAACAGACTTCGCCCTTACCGTAAAGGCTTTATCTATTTATTCTGCAG TGTGCTGGCCAGCGTGGTGTTAGTGCGCCTTGGCAAAAATTTCACCCATATGACTTGCCCTTGGGATGTGATTGAGTTTG GTGGTCGTATGCTGCACTCATCCCTGTTTGCTCGCTTGCCTGATGGCGCCGCGTTTGGTCAGTGTTTCCCCGGTGGACAT TCGAGTGGTGGTTTTGCTTGGGTAGCAAGCTATTATGTGTTGAAGGAATACCGCCCAGCTTATGCCAAAGCGGGACTCAT CTTTGGGATAGTATTAGGCGCGGTGTTTGGTTTTGCGCAGGAGCTGCGTGGTGCCCACTTTTTGAGCCATGATCTCTGGA GTTTGGCAATTGCCTGGACATCCGCCAGCTTGCTCTACTATGGCTTCTTCCTTCGTGTGCCCAAGGTTAAAAAGATTAAA GTCGCCAACCAAATCAGTATTATCAATACTAAAGAAGCCATCTCTAAGTGA
Upstream 100 bases:
>100_bases TTAATTGCGGTGTTTTGTGTTTCTTAAGCTTTTGATAAGAATTCGCCCGTAGTCTGGTGCTGGGTATTTTTGGCTAGTGG ATAATTAAGTGCATCACAAT
Downstream 100 bases:
>100_bases TGGCTTATTCCTCAAGTCACTCTTATCCCTCAAGCTAGTCTGAGGCGAAAGCTTAGAAGCGAAACTCAAAGCGGATATCG CCTTGACGCAATCTGAGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: PAP2 Superfamily Protein-Like Protein; PAP2 Family Protein; Phosphoesterase PA-Phosphatase ; Phosphoesterase; Transmembrane Protein; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Superfamily; Pap2 Superfamily Protein-Like Protein; Phosphoesterase PA-Phosphatase-Like; Phosphoesterase Pa-Phosphatase-Like Protein; Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Protein-Like; PAP2 Superfamily Membrane Protein
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKSNVRTTFFSFAKGHLLAPWLVFAVIIFWLELTHADMRFASMLFHWQGGVDSWPLRGHWLTENLLHVTGRNLVILLAVV VVSCIGLSFRVNRLRPYRKGFIYLFCSVLASVVLVRLGKNFTHMTCPWDVIEFGGRMLHSSLFARLPDGAAFGQCFPGGH SSGGFAWVASYYVLKEYRPAYAKAGLIFGIVLGAVFGFAQELRGAHFLSHDLWSLAIAWTSASLLYYGFFLRVPKVKKIK VANQISIINTKEAISK
Sequences:
>Translated_256_residues MKSNVRTTFFSFAKGHLLAPWLVFAVIIFWLELTHADMRFASMLFHWQGGVDSWPLRGHWLTENLLHVTGRNLVILLAVV VVSCIGLSFRVNRLRPYRKGFIYLFCSVLASVVLVRLGKNFTHMTCPWDVIEFGGRMLHSSLFARLPDGAAFGQCFPGGH SSGGFAWVASYYVLKEYRPAYAKAGLIFGIVLGAVFGFAQELRGAHFLSHDLWSLAIAWTSASLLYYGFFLRVPKVKKIK VANQISIINTKEAISK >Mature_256_residues MKSNVRTTFFSFAKGHLLAPWLVFAVIIFWLELTHADMRFASMLFHWQGGVDSWPLRGHWLTENLLHVTGRNLVILLAVV VVSCIGLSFRVNRLRPYRKGFIYLFCSVLASVVLVRLGKNFTHMTCPWDVIEFGGRMLHSSLFARLPDGAAFGQCFPGGH SSGGFAWVASYYVLKEYRPAYAKAGLIFGIVLGAVFGFAQELRGAHFLSHDLWSLAIAWTSASLLYYGFFLRVPKVKKIK VANQISIINTKEAISK
Specific function: Unknown
COG id: COG3907
COG function: function code R; PAP2 (acid phosphatase) superfamily protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28780; Mature: 28780
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNVRTTFFSFAKGHLLAPWLVFAVIIFWLELTHADMRFASMLFHWQGGVDSWPLRGHW CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LTENLLHVTGRNLVILLAVVVVSCIGLSFRVNRLRPYRKGFIYLFCSVLASVVLVRLGKN HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC FTHMTCPWDVIEFGGRMLHSSLFARLPDGAAFGQCFPGGHSSGGFAWVASYYVLKEYRPA CCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHH YAKAGLIFGIVLGAVFGFAQELRGAHFLSHDLWSLAIAWTSASLLYYGFFLRVPKVKKIK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VANQISIINTKEAISK EHHHEEEEECHHHHCC >Mature Secondary Structure MKSNVRTTFFSFAKGHLLAPWLVFAVIIFWLELTHADMRFASMLFHWQGGVDSWPLRGHW CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LTENLLHVTGRNLVILLAVVVVSCIGLSFRVNRLRPYRKGFIYLFCSVLASVVLVRLGKN HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC FTHMTCPWDVIEFGGRMLHSSLFARLPDGAAFGQCFPGGHSSGGFAWVASYYVLKEYRPA CCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHH YAKAGLIFGIVLGAVFGFAQELRGAHFLSHDLWSLAIAWTSASLLYYGFFLRVPKVKKIK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VANQISIINTKEAISK EHHHEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA