Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113968975

Identifier: 113968975

GI number: 113968975

Start: 730125

End: 730826

Strand: Direct

Name: 113968975

Synonym: Shewmr4_0631

Alternate gene names: NA

Gene position: 730125-730826 (Clockwise)

Preceding gene: 113968973

Following gene: 113968980

Centisome position: 15.51

GC content: 46.72

Gene sequence:

>702_bases
ATGTTCCTATCGCCGTATTTTTCTAAGCAAAATCAATCAATTTCTGTTTCTGCACAACAAGCCAGTGACTTCGCCAAGAA
AATTGCCCAAGACTTCAACCCTATCCACGATGTGGGTGCTAAGCGTTTCTGTGTGCCAGGGGACTTGCTATTTGCCTTAG
TCTTAACTCAATACGGCTTAAGCCAGAATATGAAGTTTACCTTTGCGGGTATGGTCGGCGATGGCGTCGAGCTGCAATTC
CCCGAACAGGTGAGCGACAGTTTTGCAATCTGCGATAACCGCGAGAAAACCTATTTGCAGGTGAGTCGTCAGGGCGAGGT
GAGTCGCTGCGACGCGCAAACCGAATCTTTTATTCGCAATTATGTGGCGTTCTCGGGTCACAATTTTATCGACATTCTGA
TGCCTTTAATGAAACAGCATCAAGTGATGATTAATCCTGATCGTCCCTTAGTGATTTACGAGAGCATGTCATTCGATTTG
ACCAGCCTCGACTTTGTAGAAGTGAGTTTATCGCTTGTACAACAAGAGCTTAAGATTGACGGTAAGCGTGGCGATGTGAC
GCTGCACTTTGAGCTGCACAGCGGTGAAACCTTAGTCGGTACAGGAATTAAGACCTTAGTCATGAGTGGACTACGTGCCT
ATGATGAGGTGCAAGCCCAGCAAATGTGCGCGGCTTATGAAGGGCGTAAAACCGAGTTTTGA

Upstream 100 bases:

>100_bases
GGGGGATAAGTCATCGGGTGAGTAAAATACCGAAACTAGGATAGACTCGTTGCACTTTTTATTTTTCGCCCAATATTGAG
CCACTAAAGATCGAGTTTAT

Downstream 100 bases:

>100_bases
TTGGCTGATGCCCGTTAGTAAGTGAGTGTCACCTCAGGCAAAGAGGAAGTTAGAAGGCGCTCATTATCACTTAGCTCGAG
TCAAATCAGTTGGGATAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MFLSPYFSKQNQSISVSAQQASDFAKKIAQDFNPIHDVGAKRFCVPGDLLFALVLTQYGLSQNMKFTFAGMVGDGVELQF
PEQVSDSFAICDNREKTYLQVSRQGEVSRCDAQTESFIRNYVAFSGHNFIDILMPLMKQHQVMINPDRPLVIYESMSFDL
TSLDFVEVSLSLVQQELKIDGKRGDVTLHFELHSGETLVGTGIKTLVMSGLRAYDEVQAQQMCAAYEGRKTEF

Sequences:

>Translated_233_residues
MFLSPYFSKQNQSISVSAQQASDFAKKIAQDFNPIHDVGAKRFCVPGDLLFALVLTQYGLSQNMKFTFAGMVGDGVELQF
PEQVSDSFAICDNREKTYLQVSRQGEVSRCDAQTESFIRNYVAFSGHNFIDILMPLMKQHQVMINPDRPLVIYESMSFDL
TSLDFVEVSLSLVQQELKIDGKRGDVTLHFELHSGETLVGTGIKTLVMSGLRAYDEVQAQQMCAAYEGRKTEF
>Mature_233_residues
MFLSPYFSKQNQSISVSAQQASDFAKKIAQDFNPIHDVGAKRFCVPGDLLFALVLTQYGLSQNMKFTFAGMVGDGVELQF
PEQVSDSFAICDNREKTYLQVSRQGEVSRCDAQTESFIRNYVAFSGHNFIDILMPLMKQHQVMINPDRPLVIYESMSFDL
TSLDFVEVSLSLVQQELKIDGKRGDVTLHFELHSGETLVGTGIKTLVMSGLRAYDEVQAQQMCAAYEGRKTEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26183; Mature: 26183

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSPYFSKQNQSISVSAQQASDFAKKIAQDFNPIHDVGAKRFCVPGDLLFALVLTQYGL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCC
SQNMKFTFAGMVGDGVELQFPEQVSDSFAICDNREKTYLQVSRQGEVSRCDAQTESFIRN
CCCCEEEEEEECCCCCEEECCHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHH
YVAFSGHNFIDILMPLMKQHQVMINPDRPLVIYESMSFDLTSLDFVEVSLSLVQQELKID
HHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
GKRGDVTLHFELHSGETLVGTGIKTLVMSGLRAYDEVQAQQMCAAYEGRKTEF
CCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFLSPYFSKQNQSISVSAQQASDFAKKIAQDFNPIHDVGAKRFCVPGDLLFALVLTQYGL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCC
SQNMKFTFAGMVGDGVELQFPEQVSDSFAICDNREKTYLQVSRQGEVSRCDAQTESFIRN
CCCCEEEEEEECCCCCEEECCHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHH
YVAFSGHNFIDILMPLMKQHQVMINPDRPLVIYESMSFDLTSLDFVEVSLSLVQQELKID
HHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
GKRGDVTLHFELHSGETLVGTGIKTLVMSGLRAYDEVQAQQMCAAYEGRKTEF
CCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA