| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is yjeE [H]
Identifier: 113968938
GI number: 113968938
Start: 686797
End: 687255
Strand: Direct
Name: yjeE [H]
Synonym: Shewmr4_0594
Alternate gene names: 113968938
Gene position: 686797-687255 (Clockwise)
Preceding gene: 113968937
Following gene: 113968939
Centisome position: 14.59
GC content: 43.57
Gene sequence:
>459_bases ATGACAGAGTTAACCTTTCAATTAAATAACGAAGACGAGACTATTGCGGTAGGGCAAAAACTGGCCCGCCATATTCAAGC GCCTTTGACTCTGTATTTGACGGGGGATTTAGGGGCGGGTAAAACCACTCTGAGCCGCGGTTTAATCCAAGGATTAGGGC ATAAAGGAGCGGTAAAGAGCCCGACCTACACTTTAGTTGAACCTTATGAGCTAGACGGTGTCGAAGTTTATCATTTTGAT TTGTATCGTTTAAACGATCCTGAAGAACTCGAGTTCATGGGGATCCGTGATTACTTTACCGATAGCAGCCTGTGCATTGT GGAATGGCCTGACAAAGGTCATGGACTCTTGCCCGATGCCGATATTCACCTGCATTTAAATTATGTTAACCAAGGACGTG AAATCCAAATTCGAGCCTTAACAGAATCAGGTAAAAAGCTATTAGCCGCAATAAAATAA
Upstream 100 bases:
>100_bases GTAAATAGTGATTTACTCTAGGCGCTGTAAAACTTAAGCGCAGGACATTCCCGCGCTTAAGTTGCCTCCTCCATCCATAA CAGCAGTGATAAAAGCGGAA
Downstream 100 bases:
>100_bases AAACAAAGATGACTAAAAATAAGCATTACTTTCAGACTATTACTCTTTTTTTGTGCGCTTTTTTTGCTGTAGCAGCCCAC GCGGCTAACCAGCTTGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTELTFQLNNEDETIAVGQKLARHIQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKSPTYTLVEPYELDGVEVYHFD LYRLNDPEELEFMGIRDYFTDSSLCIVEWPDKGHGLLPDADIHLHLNYVNQGREIQIRALTESGKKLLAAIK
Sequences:
>Translated_152_residues MTELTFQLNNEDETIAVGQKLARHIQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKSPTYTLVEPYELDGVEVYHFD LYRLNDPEELEFMGIRDYFTDSSLCIVEWPDKGHGLLPDADIHLHLNYVNQGREIQIRALTESGKKLLAAIK >Mature_151_residues TELTFQLNNEDETIAVGQKLARHIQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKSPTYTLVEPYELDGVEVYHFDL YRLNDPEELEFMGIRDYFTDSSLCIVEWPDKGHGLLPDADIHLHLNYVNQGREIQIRALTESGKKLLAAIK
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=149, Percent_Identity=56.3758389261745, Blast_Score=188, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17010; Mature: 16878
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELTFQLNNEDETIAVGQKLARHIQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKS CCEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTLVEPYELDGVEVYHFDLYRLNDPEELEFMGIRDYFTDSSLCIVEWPDKGHGLLPDA CCEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DIHLHLNYVNQGREIQIRALTESGKKLLAAIK EEEEEEEEECCCCEEEEEEECCCCCEEEEECC >Mature Secondary Structure TELTFQLNNEDETIAVGQKLARHIQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKS CEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTLVEPYELDGVEVYHFDLYRLNDPEELEFMGIRDYFTDSSLCIVEWPDKGHGLLPDA CCEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DIHLHLNYVNQGREIQIRALTESGKKLLAAIK EEEEEEEEECCCCEEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]