Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is yecA [C]

Identifier: 113968812

GI number: 113968812

Start: 530166

End: 531170

Strand: Direct

Name: yecA [C]

Synonym: Shewmr4_0468

Alternate gene names: 113968812

Gene position: 530166-531170 (Clockwise)

Preceding gene: 113968811

Following gene: 113968813

Centisome position: 11.27

GC content: 43.58

Gene sequence:

>1005_bases
ATGAAACTCGGTCGTAACGATCCTTGCCATTGTGGCAGTGGTAAAAAGTTTAAACGTTGTTGTATGAGCAGCGTTTTCCA
GCAACATGCCCAAGTGTTCGATGATGTTGAGGCTATGTTGGCAATGAACCCAAATTTGAGCCTTGATGAACTTAACGCCG
TTTTACAACACAAAGTTCAGGATCGCAATAATCAACCTCATCCCGATTTTTGTGGCGTAACACCAACACAAATGGCCAAT
TGGCTATATGCGCCTTTTGAGCAATTACAGTGGGTGAAAATCAGCACACCAGACGATCTTTCAACCAGTCCGGTGATGCG
TTATCTAGCGCTAATTCTTGATGAGGCCATGGCGCAAGAAGGCTCCTTCAAAGCCACAAGTAAAGGCAGCTTACCGGCTA
AGTTGGTTAAACAGGCCTGTGAGTTATTACCTGAGTTTGCCGTTGCTCAGTTCGAACGTGATCTCAGTATCAGCGAGTTT
GCGGGCAGTAACGAAGACAAATTTAATGCCTTGCACTACACCCGAGTGCTTGCCGAAATTAGTGGTATTATTTACCTTCG
TAGTGGCCGTTATCACGTTAAAAAGTCAGCGCAAAAGCAGTATCAAGCTCTAGGCATACAGGCATTTTTTAAACCTATGT
TAGAGGCTGCCATCGGCAAATATAACTGGGGCTATCTGGATGGTTTTGAGTTTGATGTCGACTTACGAACCTTTTGGTTA
TTTATGTTGTGGCGCCTACAAGGTCATCACAGTGTAGAAAAGCTGGTGAAAGAGGTGATGACGGCTTTCCCCGATTTACT
GCTTGCATTCGCTTTGGATGATTACTTCTCGCTAGAAAGAAACTTAAGCATGCTCATCGAATCTCGATTTATTGAGCGAT
TTTTACAGTTTTGGGGATTTTTGATCATTGAGCCAAGGCGTTACAAAGACGCTGAACCGATCGGCAGAGTTGTTAAGGTA
CAGCCTTTGTTAAAACAAACTTTTCAATTCACCATTAACGCATAG

Upstream 100 bases:

>100_bases
GCAAAGAGTTAAAGATTGTCTTAATTTCAACGGTGTTGTCGTGAGTGCAAAGTTTTAAGGCTTTGTCAGTAAGTATCTAC
AACAATAAAAAGAGACAGCA

Downstream 100 bases:

>100_bases
CAAGGTCATCGTGAGCGAATATCAATACTATAAATTCGAGCGTCTGGATGGGTACTTAGATGCTAAGGCGCGTCAAGCAC
TCAGAACCATTTCAAGCCGT

Product: SecC motif-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKLGRNDPCHCGSGKKFKRCCMSSVFQQHAQVFDDVEAMLAMNPNLSLDELNAVLQHKVQDRNNQPHPDFCGVTPTQMAN
WLYAPFEQLQWVKISTPDDLSTSPVMRYLALILDEAMAQEGSFKATSKGSLPAKLVKQACELLPEFAVAQFERDLSISEF
AGSNEDKFNALHYTRVLAEISGIIYLRSGRYHVKKSAQKQYQALGIQAFFKPMLEAAIGKYNWGYLDGFEFDVDLRTFWL
FMLWRLQGHHSVEKLVKEVMTAFPDLLLAFALDDYFSLERNLSMLIESRFIERFLQFWGFLIIEPRRYKDAEPIGRVVKV
QPLLKQTFQFTINA

Sequences:

>Translated_334_residues
MKLGRNDPCHCGSGKKFKRCCMSSVFQQHAQVFDDVEAMLAMNPNLSLDELNAVLQHKVQDRNNQPHPDFCGVTPTQMAN
WLYAPFEQLQWVKISTPDDLSTSPVMRYLALILDEAMAQEGSFKATSKGSLPAKLVKQACELLPEFAVAQFERDLSISEF
AGSNEDKFNALHYTRVLAEISGIIYLRSGRYHVKKSAQKQYQALGIQAFFKPMLEAAIGKYNWGYLDGFEFDVDLRTFWL
FMLWRLQGHHSVEKLVKEVMTAFPDLLLAFALDDYFSLERNLSMLIESRFIERFLQFWGFLIIEPRRYKDAEPIGRVVKV
QPLLKQTFQFTINA
>Mature_334_residues
MKLGRNDPCHCGSGKKFKRCCMSSVFQQHAQVFDDVEAMLAMNPNLSLDELNAVLQHKVQDRNNQPHPDFCGVTPTQMAN
WLYAPFEQLQWVKISTPDDLSTSPVMRYLALILDEAMAQEGSFKATSKGSLPAKLVKQACELLPEFAVAQFERDLSISEF
AGSNEDKFNALHYTRVLAEISGIIYLRSGRYHVKKSAQKQYQALGIQAFFKPMLEAAIGKYNWGYLDGFEFDVDLRTFWL
FMLWRLQGHHSVEKLVKEVMTAFPDLLLAFALDDYFSLERNLSMLIESRFIERFLQFWGFLIIEPRRYKDAEPIGRVVKV
QPLLKQTFQFTINA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38433; Mature: 38433

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGRNDPCHCGSGKKFKRCCMSSVFQQHAQVFDDVEAMLAMNPNLSLDELNAVLQHKVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DRNNQPHPDFCGVTPTQMANWLYAPFEQLQWVKISTPDDLSTSPVMRYLALILDEAMAQE
HCCCCCCCCCCCCCHHHHHHHHHCCHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
GSFKATSKGSLPAKLVKQACELLPEFAVAQFERDLSISEFAGSNEDKFNALHYTRVLAEI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHH
SGIIYLRSGRYHVKKSAQKQYQALGIQAFFKPMLEAAIGKYNWGYLDGFEFDVDLRTFWL
HCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHH
FMLWRLQGHHSVEKLVKEVMTAFPDLLLAFALDDYFSLERNLSMLIESRFIERFLQFWGF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
LIIEPRRYKDAEPIGRVVKVQPLLKQTFQFTINA
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLGRNDPCHCGSGKKFKRCCMSSVFQQHAQVFDDVEAMLAMNPNLSLDELNAVLQHKVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DRNNQPHPDFCGVTPTQMANWLYAPFEQLQWVKISTPDDLSTSPVMRYLALILDEAMAQE
HCCCCCCCCCCCCCHHHHHHHHHCCHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
GSFKATSKGSLPAKLVKQACELLPEFAVAQFERDLSISEFAGSNEDKFNALHYTRVLAEI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHH
SGIIYLRSGRYHVKKSAQKQYQALGIQAFFKPMLEAAIGKYNWGYLDGFEFDVDLRTFWL
HCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHH
FMLWRLQGHHSVEKLVKEVMTAFPDLLLAFALDDYFSLERNLSMLIESRFIERFLQFWGF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
LIIEPRRYKDAEPIGRVVKVQPLLKQTFQFTINA
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA