Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is nudH [C]

Identifier: 113968811

GI number: 113968811

Start: 529716

End: 530123

Strand: Direct

Name: nudH [C]

Synonym: Shewmr4_0467

Alternate gene names: 113968811

Gene position: 529716-530123 (Clockwise)

Preceding gene: 113968810

Following gene: 113968812

Centisome position: 11.26

GC content: 50.25

Gene sequence:

>408_bases
ATGGCATTTGAAGATAGGTTTCGGCTCAGTAGCCATGGGGTGATCACTAACGATGCAGGCCAAGTGTTACTCCTTAAGGC
AAATTACGGCAATTGCGCCTGGGGCTTACCCGGCGGCGCCTTAGAGCCCGGTGAAACGATTCACGAAGCCCTGCTGCGCG
AATGCCAAGAGGAACTGGGGCTGGCGGTGAACGTCCACTACCTAAGCGGCGTGTATTATCACAGCACCTATCAATCCCAA
GCTTTTATCTTTCGTTGTGAGTTTGCATCTGCCGACGCCGTGATTCGCTTAAGCCATGAACACTCAGAGTTTGCCTTCCA
TGATATCGACACACTTAGCGCGGTCCAGCAGCAAAGAGTTAAAGATTGTCTTAATTTCAACGGTGTTGTCGTGAGTGCAA
AGTTTTAA

Upstream 100 bases:

>100_bases
GTAAAATGGTTTAAGACGGGTTTTGCCTCAGGCAAGCTTGCCAGCTGCAATACCTTTAATCACAACTCGTGATAACACTG
CCTTAGCGTGGGATTGAAAC

Downstream 100 bases:

>100_bases
GGCTTTGTCAGTAAGTATCTACAACAATAAAAAGAGACAGCAATGAAACTCGGTCGTAACGATCCTTGCCATTGTGGCAG
TGGTAAAAAGTTTAAACGTT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: MutT/Nudix Family Protein; MutT-Like Protein; NUDIX Family Hydrolase

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAFEDRFRLSSHGVITNDAGQVLLLKANYGNCAWGLPGGALEPGETIHEALLRECQEELGLAVNVHYLSGVYYHSTYQSQ
AFIFRCEFASADAVIRLSHEHSEFAFHDIDTLSAVQQQRVKDCLNFNGVVVSAKF

Sequences:

>Translated_135_residues
MAFEDRFRLSSHGVITNDAGQVLLLKANYGNCAWGLPGGALEPGETIHEALLRECQEELGLAVNVHYLSGVYYHSTYQSQ
AFIFRCEFASADAVIRLSHEHSEFAFHDIDTLSAVQQQRVKDCLNFNGVVVSAKF
>Mature_134_residues
AFEDRFRLSSHGVITNDAGQVLLLKANYGNCAWGLPGGALEPGETIHEALLRECQEELGLAVNVHYLSGVYYHSTYQSQA
FIFRCEFASADAVIRLSHEHSEFAFHDIDTLSAVQQQRVKDCLNFNGVVVSAKF

Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 15009; Mature: 14878

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEDRFRLSSHGVITNDAGQVLLLKANYGNCAWGLPGGALEPGETIHEALLRECQEELG
CCCCCCEEECCCCEEECCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCC
LAVNVHYLSGVYYHSTYQSQAFIFRCEFASADAVIRLSHEHSEFAFHDIDTLSAVQQQRV
CEEEEEECCEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHH
KDCLNFNGVVVSAKF
HHHHCCCCEEEEECC
>Mature Secondary Structure 
AFEDRFRLSSHGVITNDAGQVLLLKANYGNCAWGLPGGALEPGETIHEALLRECQEELG
CCCCCEEECCCCEEECCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCC
LAVNVHYLSGVYYHSTYQSQAFIFRCEFASADAVIRLSHEHSEFAFHDIDTLSAVQQQRV
CEEEEEECCEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHH
KDCLNFNGVVVSAKF
HHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA