| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is yigA [C]
Identifier: 113968737
GI number: 113968737
Start: 441131
End: 441766
Strand: Direct
Name: yigA [C]
Synonym: Shewmr4_0393
Alternate gene names: 113968737
Gene position: 441131-441766 (Clockwise)
Preceding gene: 113968736
Following gene: 113968738
Centisome position: 9.37
GC content: 48.43
Gene sequence:
>636_bases ATGACCGAGCCTTTGATGCCGCAGACCGATCTTCCCTTCGATGAGTTGATTATTCGCGAGTACCTACTCGATAACCCAGA CTTTTTTAATCGTTATCCCGAGCTGTTACTTGCGATGCGCTTACCCCATTCGGAGCGCGGCGCGATTTCCTTGGTCGAGC GTCGTCAAGAGTTACTGCGCCAACGGGTTGGGCAACTCGAAGAAGAAATCACCAGTCTGCTGGCGATGGCAGCGCGCAAT GAAAAGATATTCCTCTTTAATACCGAGCTGTCTTTTAAATTACTCAATTGCGTTAATTTAGAAGCCCTTAAAGAAGTGCT GGCCGATAGTTTAAAGACGCAGTTTAATTTTACCCATGTGCGCCTGATCAGCGTGTTAGATGCTGATGTGGAGATGCAAG TGATTTGGGCTCAGCGTTTGCGCAAGGATTACTACTTTGGCCGGTTAACCCAGCAAGAAGCGAAACGCCTGTTTGGTAGC GAAGTGGGCTCTGTCGCGTTAGTGAAATTAGCCGATGAGATCCCGATGATTTTTGCCGTTGCTAGCCAAGATGCGGCGCA TTTCCATCCCGATATGGACAATATGTTGCTCGAACAATTGCGCCGATTACTCGCACATATGCTGGCCAAGCTTTAA
Upstream 100 bases:
>100_bases ACTTGCCCGGGGGCACCTTAACCATCAATTGGGAAGGCGAAGGCAAACCCCTGTGGATGACGGGGCCAGCGCAGCACGTT TACGATGGACAAATTCAGTT
Downstream 100 bases:
>100_bases GGTACATGGTTCGCCTTGCCTCAATTGCATAATGATGAGGAGATGGAGATGACCCCGCAGTGTCAGTCCTATTTGCAGCA GTTTGAAACCTATATGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTEPLMPQTDLPFDELIIREYLLDNPDFFNRYPELLLAMRLPHSERGAISLVERRQELLRQRVGQLEEEITSLLAMAARN EKIFLFNTELSFKLLNCVNLEALKEVLADSLKTQFNFTHVRLISVLDADVEMQVIWAQRLRKDYYFGRLTQQEAKRLFGS EVGSVALVKLADEIPMIFAVASQDAAHFHPDMDNMLLEQLRRLLAHMLAKL
Sequences:
>Translated_211_residues MTEPLMPQTDLPFDELIIREYLLDNPDFFNRYPELLLAMRLPHSERGAISLVERRQELLRQRVGQLEEEITSLLAMAARN EKIFLFNTELSFKLLNCVNLEALKEVLADSLKTQFNFTHVRLISVLDADVEMQVIWAQRLRKDYYFGRLTQQEAKRLFGS EVGSVALVKLADEIPMIFAVASQDAAHFHPDMDNMLLEQLRRLLAHMLAKL >Mature_210_residues TEPLMPQTDLPFDELIIREYLLDNPDFFNRYPELLLAMRLPHSERGAISLVERRQELLRQRVGQLEEEITSLLAMAARNE KIFLFNTELSFKLLNCVNLEALKEVLADSLKTQFNFTHVRLISVLDADVEMQVIWAQRLRKDYYFGRLTQQEAKRLFGSE VGSVALVKLADEIPMIFAVASQDAAHFHPDMDNMLLEQLRRLLAHMLAKL
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24502; Mature: 24371
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLMPQTDLPFDELIIREYLLDNPDFFNRYPELLLAMRLPHSERGAISLVERRQELLR CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QRVGQLEEEITSLLAMAARNEKIFLFNTELSFKLLNCVNLEALKEVLADSLKTQFNFTHV HHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH RLISVLDADVEMQVIWAQRLRKDYYFGRLTQQEAKRLFGSEVGSVALVKLADEIPMIFAV HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCEEEEE ASQDAAHFHPDMDNMLLEQLRRLLAHMLAKL CCCCCHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEPLMPQTDLPFDELIIREYLLDNPDFFNRYPELLLAMRLPHSERGAISLVERRQELLR CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QRVGQLEEEITSLLAMAARNEKIFLFNTELSFKLLNCVNLEALKEVLADSLKTQFNFTHV HHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH RLISVLDADVEMQVIWAQRLRKDYYFGRLTQQEAKRLFGSEVGSVALVKLADEIPMIFAV HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCEEEEE ASQDAAHFHPDMDNMLLEQLRRLLAHMLAKL CCCCCHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA