| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is katG1 [H]
Identifier: 113968655
GI number: 113968655
Start: 336349
End: 338535
Strand: Direct
Name: katG1 [H]
Synonym: Shewmr4_0311
Alternate gene names: 113968655
Gene position: 336349-338535 (Clockwise)
Preceding gene: 113968654
Following gene: 113968660
Centisome position: 7.15
GC content: 53.22
Gene sequence:
>2187_bases ATGGACAAGACTCAAAGCTCCCAAGGTAAATGCCCCGTGATGCATGGGGCAAATTCAGCGGTCGCCAGCAACAATATGGA TTGGTGGCCTAAGGCACTTAACCTCGATATATTGCACCAGCACGATAAGAAGACGGATCCTATGGATCCTAAGTTTAACT ATCGCGAAGCCTTCAACAGCTTAGATCTCGCCGCTGTGAAGCGCGACCTCAATGCCTTAATGACCGACAGCCAAGATTGG TGGCCCGCCGACTGGGGACACTATGGCGGTCTGATGATCCGTATGGCATGGCACTCGGCCGGGACCTATAGAGTCGCCGA TGGCCGTGGCGGCGCGGGAACGGGCAATCAACGCTTTGCCCCACTCAATAGCTGGCCCGATAACGCCAACTTAGACAAGG CGCGCCGTTTACTCTGGCCGATTAAGAAAAAATACGGCAACAAACTCTCATGGGCGGATTTGATGATCCTCGCGGGCAAT GTGGCCTACGAGTCTATGGGCTTAAAAACCTATGGCTTTGCTGGTGGTCGAGAGGATATTTGGCACCCAGAGAAGGACAT TTATTGGGGCTCTGAAAAACAATGGTTAGCGCCGACGGAAAATCCCAACAGCCGTTACTCGGGCGAGCGTGACCTTGAAA ACCCCTTGGCCGCGGTGATGATGGGGCTGATCTATGTGAATCCAGAAGGGGTTGATGGCAAACCCGATCCCCTGCGAACC GCCCAAGATGTGCGTGTCACCTTTGCGCGAATGGCGATGAATGATGAAGAGACAGTGGCTCTAACCGCAGGAGGCCACAC CGTGGGTAAGTGCCACGGTAATGGCAAGGCGCAGGATCTTGGCCCCGAGCCTGAGGGCGAAGATCTTGAGGCCCAAGGTT TGGGCTGGCTCAACAAAAAAGGCCCAGGCATTGGCGCAAATGCCGTGACCAGTGGCCTCGAAGGTGCTTGGACGACTTAT CCCACTCAATGGGATAACGGTTATTTTCACCTACTGTTAAATTACGATTGGGAATTGAAAAAAAGCCCAGCGGGCGCCTC GCAGTGGGAACCTATTAATATCAAAGAGGAAGATAAAGTCGTCTCAGTGGGCGATCCCAATCGCAAGTTTAATCCCATCA TGACGGATGCGGATATGGCGATGAAGATGGACCCCGAGTATCGCAAAATCTCCGAGAAGTTTTATCAAGACCCCGCCTAT TTCTCCGAGGTTTTTGCCCGCGCTTGGTTTAAGTTAACCCATCGCGATCTGGGTCCGAAGAGCCGCTACTTGGGGCCAGA AGTGCCGAATGAGGATTTGCTTTGGCAAGACCCGATCCCAAGCGTCGATTATCGCTTAGATGCCAGTGAGATTGTCGACC TGAAGGCGAAATTATTAGCCTCGGGACTCAGCGTATCCGAGTTAGTGGCAACGGCGTGGGACAGTGCCCGCACCTTCCGT GGCTCGGATTTCCGTGGTGGCGCCAATGGCGCGCGGATCCGCTTAGCACCGCAAAAGGATTGGCAGGCTAACGAACCCGA GCGGCTGCAAAAGGTGCTTAAAGTATTGACCGAGTTGCAGGCAAGCCTAAGCAAAAAAGTCAGCATCGCCGACTTAATCG TGTTGGGCGGCGCTGCTGCGATTGAAAAGGCCGCCCACGAGGCGGGAGTGAAGGTGACAGTGCCCTTTATCCCCGGCCGT GGCGATGCGACGCAGGAAATGACCGATGTGGAATCTTTTGCCGTGCTTGAGCCCTTGCACGATGCGTATCGTAACTGGCA GAAAAAGGATTATGTGGTTCAGCCCGAGGAGATGATGCTCGATCGTACTCAATTGATGGGGTTAACCGCCCATGAGATGA CAGTGCTGGTTGGGGGAATGCGGGTGTTAGGCACTAACTATGGCGGCACGCGTCATGGTGTGTTTACCGACAAAGTAGGT GTGTTAACTAATGATTTCTTTGTGAATCTGACCGACATGGCCTACAACTGGAAGCCTGCGGGCAGCAATCTTTATCAGAT AGTCGAGCGCAAAACTGGCGCAGTGAAGTGGACCGCTAGCCGTGTCGATCTGGTGTTTGGTTCTAACTCTATTTTGCGTG CCTATGCCGAGATGTATGCGCAGGATGATGCCAAAGAGAAGTTTGTGCATGATTTTGTGGCCGCTTGGACTAAGGTGATG AATGCCGATAGGTTCGATTTGGCTTAG
Upstream 100 bases:
>100_bases TTGGCAAACTGTGAAGGCTCTCGTTTCGACCGTAGTGTGTCTAGCAAGAGTTTTAGGGCGCGCTACTCCCGTTAGTGCAA GCTAAATAAAGGAATATTCA
Downstream 100 bases:
>100_bases TCACTAGCGCGTAAGCTTATCGTGAATAAAAAGGTGCAGCTTGGGCTGCACCTTTTTATGTCTACTTATCAATAAATCAG AGAATTAATGGCCCACTCGG
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP 1; Peroxidase/catalase 1 [H]
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYREAFNSLDLAAVKRDLNALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGN VAYESMGLKTYGFAGGREDIWHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEDLEAQGLGWLNKKGPGIGANAVTSGLEGAWTTY PTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKVVSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVDLKAKLLASGLSVSELVATAWDSARTFR GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLTELQASLSKKVSIADLIVLGGAAAIEKAAHEAGVKVTVPFIPGR GDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMMLDRTQLMGLTAHEMTVLVGGMRVLGTNYGGTRHGVFTDKVG VLTNDFFVNLTDMAYNWKPAGSNLYQIVERKTGAVKWTASRVDLVFGSNSILRAYAEMYAQDDAKEKFVHDFVAAWTKVM NADRFDLA
Sequences:
>Translated_728_residues MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYREAFNSLDLAAVKRDLNALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGN VAYESMGLKTYGFAGGREDIWHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEDLEAQGLGWLNKKGPGIGANAVTSGLEGAWTTY PTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKVVSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVDLKAKLLASGLSVSELVATAWDSARTFR GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLTELQASLSKKVSIADLIVLGGAAAIEKAAHEAGVKVTVPFIPGR GDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMMLDRTQLMGLTAHEMTVLVGGMRVLGTNYGGTRHGVFTDKVG VLTNDFFVNLTDMAYNWKPAGSNLYQIVERKTGAVKWTASRVDLVFGSNSILRAYAEMYAQDDAKEKFVHDFVAAWTKVM NADRFDLA >Mature_728_residues MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYREAFNSLDLAAVKRDLNALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGN VAYESMGLKTYGFAGGREDIWHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEDLEAQGLGWLNKKGPGIGANAVTSGLEGAWTTY PTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKVVSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVDLKAKLLASGLSVSELVATAWDSARTFR GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLTELQASLSKKVSIADLIVLGGAAAIEKAAHEAGVKVTVPFIPGR GDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMMLDRTQLMGLTAHEMTVLVGGMRVLGTNYGGTRHGVFTDKVG VLTNDFFVNLTDMAYNWKPAGSNLYQIVERKTGAVKWTASRVDLVFGSNSILRAYAEMYAQDDAKEKFVHDFVAAWTKVM NADRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=727, Percent_Identity=56.121045392022, Blast_Score=813, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 81170; Mature: 81170
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYREAFNS CCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCC LDLAAVKRDLNALMTDSQDWWPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC PLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGNVAYESMGLKTYGFAGGREDI CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCEEECCCCCCCCC WHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT CCCCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCC AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEDLEAQGLGWLNKK HHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPGIGANAVTSGLEGAWTTYPTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKV CCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE VSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAYFSEVFARAWFKLTHRDLGPK EECCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC SRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVDLKAKLLASGLSVSELVATAWDSARTFR CCCCCCCCCCCCCEECCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLTELQASLSKKVSIADLIVLGGAAA CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCHHH IEKAAHEAGVKVTVPFIPGRGDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMML HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH DRTQLMGLTAHEMTVLVGGMRVLGTNYGGTRHGVFTDKVGVLTNDFFVNLTDMAYNWKPA HHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCEECCCCEEECCEEEEEECCEEECCCC GSNLYQIVERKTGAVKWTASRVDLVFGSNSILRAYAEMYAQDDAKEKFVHDFVAAWTKVM CCHHHHHHHHCCCCEEEECCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NADRFDLA CCCCCCCC >Mature Secondary Structure MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYREAFNS CCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCC LDLAAVKRDLNALMTDSQDWWPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC PLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGNVAYESMGLKTYGFAGGREDI CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCEEECCCCCCCCC WHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT CCCCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCC AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEDLEAQGLGWLNKK HHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPGIGANAVTSGLEGAWTTYPTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKV CCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE VSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAYFSEVFARAWFKLTHRDLGPK EECCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC SRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVDLKAKLLASGLSVSELVATAWDSARTFR CCCCCCCCCCCCCEECCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLTELQASLSKKVSIADLIVLGGAAA CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCHHH IEKAAHEAGVKVTVPFIPGRGDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMML HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH DRTQLMGLTAHEMTVLVGGMRVLGTNYGGTRHGVFTDKVGVLTNDFFVNLTDMAYNWKPA HHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCEECCCCEEECCEEEEEECCEEECCCC GSNLYQIVERKTGAVKWTASRVDLVFGSNSILRAYAEMYAQDDAKEKFVHDFVAAWTKVM CCHHHHHHHHCCCCEEEECCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NADRFDLA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]