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The map label for this gene is yhbQ [C]

Identifier: 113968482

GI number: 113968482

Start: 155593

End: 156012

Strand: Direct

Name: yhbQ [C]

Synonym: Shewmr4_0137

Alternate gene names: 113968482

Gene position: 155593-156012 (Clockwise)

Preceding gene: 113968481

Following gene: 113968485

Centisome position: 3.31

GC content: 51.43

Gene sequence:

>420_bases
GTGATTGAAGCCGCTAATTCAACTCCCTCGGCTAGCCCCCAAAAAGGGGCTAGCCAAGCGCCAGCTGTTAACCAAACTCA
GCTTTCGAGCAAGCCTGAAGCGCAAGTAACTGAGCAAGCTGTGACTTCGGAGCAAGACGCGACATCAGAGATAGAACAAG
TCTCGACGTGGTATTTGTACCTTATCCGTTGCGCCAATGGCCACTTATACACAGGCATCACCACAGATGTCGCCCGCCGC
TTTAACGAACATCAATCAAGCAGCCCCAAGGCAGCAAAGTACCTGCGCGGCAAAGGGCCATTAACCCTGATGTATCAAGA
GCAAGTCGGCACCCGCAGTGATGCACTCAAGCGTGAGATTGCGGTTAAAAAGTTAAGCCGCAGTCAAAAGCTGGCGTTGA
TTGAATCTGTACTCAGATGA

Upstream 100 bases:

>100_bases
AGTGGCCGTTACCGCCAGTATCAAGACACAGCGCAGGAATATGCCTTCTTCTTAAGCCTGCTCGGCATGACTAAGTAGGC
GCCAACGGGTGACCGATTTA

Downstream 100 bases:

>100_bases
CACTGAACACTGACATCATTCAGATCTTATTGTTTTAGGTAAAAGCTAAATCAACGTCGTGGGGCTTCACCCCACACCCG
ACCAAGGAGGACTGCTCGTC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIEAANSTPSASPQKGASQAPAVNQTQLSSKPEAQVTEQAVTSEQDATSEIEQVSTWYLYLIRCANGHLYTGITTDVARR
FNEHQSSSPKAAKYLRGKGPLTLMYQEQVGTRSDALKREIAVKKLSRSQKLALIESVLR

Sequences:

>Translated_139_residues
MIEAANSTPSASPQKGASQAPAVNQTQLSSKPEAQVTEQAVTSEQDATSEIEQVSTWYLYLIRCANGHLYTGITTDVARR
FNEHQSSSPKAAKYLRGKGPLTLMYQEQVGTRSDALKREIAVKKLSRSQKLALIESVLR
>Mature_139_residues
MIEAANSTPSASPQKGASQAPAVNQTQLSSKPEAQVTEQAVTSEQDATSEIEQVSTWYLYLIRCANGHLYTGITTDVARR
FNEHQSSSPKAAKYLRGKGPLTLMYQEQVGTRSDALKREIAVKKLSRSQKLALIESVLR

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=81, Percent_Identity=55.5555555555556, Blast_Score=89, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022992
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 15238; Mature: 15238

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAANSTPSASPQKGASQAPAVNQTQLSSKPEAQVTEQAVTSEQDATSEIEQVSTWYLY
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMYQEQVGTRSDALKREI
HHHHCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHH
AVKKLSRSQKLALIESVLR
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIEAANSTPSASPQKGASQAPAVNQTQLSSKPEAQVTEQAVTSEQDATSEIEQVSTWYLY
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMYQEQVGTRSDALKREI
HHHHCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHH
AVKKLSRSQKLALIESVLR
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA