Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is yusP [H]

Identifier: 113968407

GI number: 113968407

Start: 71544

End: 72992

Strand: Direct

Name: yusP [H]

Synonym: Shewmr4_0062

Alternate gene names: 113968407

Gene position: 71544-72992 (Clockwise)

Preceding gene: 113968406

Following gene: 113968408

Centisome position: 1.52

GC content: 54.52

Gene sequence:

>1449_bases
ATGACCCCAGCGTCTGCTTCGTCCCCTCATGAGCCTCTGCCCACCTCGGTTTTTCTGGCGATTTTCTCCGCCGTATTCTT
ACCCATGTTTCTGGCGGCGGTCGATCAAACCTTACTCGCTACCGCCACCCCAGCGATAGTGGAAGATCTTGGCGGCCTCA
GGCAAGCCTCGTGGATCACTATCGGTTATATGCTGGCGATGGCGGCCAGTGTGCCTATTTACGGCTGGCTAGGGGATAAC
TATGGCCGCGCTAAAATTCTGATGATCGCCTTAGTGGTGTTTGCGTTGGGTTCAATTGTTTCCGCCAGTGCTGGGACTAT
GGACCATATGATTGCTGGCCGGATCCTCCAAGGCCTCGGTGGTGGCGGGCTGATGAGTCTGTCCCAATCCCTTGTGGGGG
AATTGGTGCCTATACGGCAAAGGGCACGTTTTCAGGGCTATTTTGCCGCTATGTTTACCCTCGCCAGTGTTGGCGGCCCT
GTGATTGGTGGCTTTGTGGTGCATGCCTATTCTTGGCACTGGTTATTTTGGGCGAATATTCCTTTGGTCATGCTGGCGGT
TTGGCGGCTTAATCGCCTGCATAAACAGAGTGTTAAACCGGTGCGGCAAGGGCGGTTTGACTTACTCGGCGTACTGTTAT
TTCCCACGATCATCACAGCGCTGCTGTATTGGTTGTCCGTGGCGGGGCAAGACTTTGCTTGGCTATCGGCCACAAGCTTA
GGCTTTATGGGATTTATCTGTGTGGGTGCCCTTGTGCTGTTGTGGTGGGAACGTCGGCGTGAGAGTCCTTTCTTACCGCT
GGATTTACTCGCCAATAAAGCCATTTATATGCCGCTCTTCACGGCCGCGCTGTTTGCCGCCTGCCTGTTTGCGATGATCT
TCTTTTTACCCATTTACTTGCAGGTCGGTCTGCACACCAATCCGGCCAAAACGGGCTTGCTGCTGATGCCAATGACCTTT
GGCATTGTGACGGGCTCCACCATCGCTGGCAGGCTGTTGAGTCGGGATGTGGCGCCTAAATGGTTGCCGACCTTCGGCAT
GGGCTTGGCCTTTATCGGTTTGCTCTTAATCGGTTTAGTGCCGCCGAATGCGAATCTTATCGGTGCTTTAGGTGTGCTGG
TGGGCATTGGTTTAGGGACTGTGATGCCCAGCGTGCAGCTAGTGGTGCAGAGCGTGTCGGGCAAGGCGCGTTTAAGCCAA
ATCACCGCTATGGTGTCCTTGAGTCGTTCCATGGGCGCGGCAATTGGTACGGCTTTATTCAGTCTGTTGCTATATGGCTT
ATTGCCGCTCGACGGGGCACAGGTGGGAATTGCGGCAATAAAGCAGTTACCCATAGAGGTTGTGCATCACGCTTTCCAAT
GGGGTTTTATCGCGGCGGCACTGGTGGCGCTCAGCTCGGCGATTGTGGGTTATTTGTCGCCTGCGACTGCGCTTAGGGAT
CATGAGTAG

Upstream 100 bases:

>100_bases
GAGCCAAGGGGTGAAAATTTCGAGCCTGCTAAACAGTTATTGGGCATCAAAGTATTGGAATGCAAGGCGAATTTAAGCCT
TAATCACAGGTGGAGACTCT

Downstream 100 bases:

>100_bases
ATTTGTTGGTGCACGACGGATTTAAGCTGTGTAGTATTTGCGGTAGGTTAGCTTCCGCTGTGACCCCATTCTTTGCCAGG
AATTCTGCATGACAACTAAA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MTPASASSPHEPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWITIGYMLAMAASVPIYGWLGDN
YGRAKILMIALVVFALGSIVSASAGTMDHMIAGRILQGLGGGGLMSLSQSLVGELVPIRQRARFQGYFAAMFTLASVGGP
VIGGFVVHAYSWHWLFWANIPLVMLAVWRLNRLHKQSVKPVRQGRFDLLGVLLFPTIITALLYWLSVAGQDFAWLSATSL
GFMGFICVGALVLLWWERRRESPFLPLDLLANKAIYMPLFTAALFAACLFAMIFFLPIYLQVGLHTNPAKTGLLLMPMTF
GIVTGSTIAGRLLSRDVAPKWLPTFGMGLAFIGLLLIGLVPPNANLIGALGVLVGIGLGTVMPSVQLVVQSVSGKARLSQ
ITAMVSLSRSMGAAIGTALFSLLLYGLLPLDGAQVGIAAIKQLPIEVVHHAFQWGFIAAALVALSSAIVGYLSPATALRD
HE

Sequences:

>Translated_482_residues
MTPASASSPHEPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWITIGYMLAMAASVPIYGWLGDN
YGRAKILMIALVVFALGSIVSASAGTMDHMIAGRILQGLGGGGLMSLSQSLVGELVPIRQRARFQGYFAAMFTLASVGGP
VIGGFVVHAYSWHWLFWANIPLVMLAVWRLNRLHKQSVKPVRQGRFDLLGVLLFPTIITALLYWLSVAGQDFAWLSATSL
GFMGFICVGALVLLWWERRRESPFLPLDLLANKAIYMPLFTAALFAACLFAMIFFLPIYLQVGLHTNPAKTGLLLMPMTF
GIVTGSTIAGRLLSRDVAPKWLPTFGMGLAFIGLLLIGLVPPNANLIGALGVLVGIGLGTVMPSVQLVVQSVSGKARLSQ
ITAMVSLSRSMGAAIGTALFSLLLYGLLPLDGAQVGIAAIKQLPIEVVHHAFQWGFIAAALVALSSAIVGYLSPATALRD
HE
>Mature_481_residues
TPASASSPHEPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWITIGYMLAMAASVPIYGWLGDNY
GRAKILMIALVVFALGSIVSASAGTMDHMIAGRILQGLGGGGLMSLSQSLVGELVPIRQRARFQGYFAAMFTLASVGGPV
IGGFVVHAYSWHWLFWANIPLVMLAVWRLNRLHKQSVKPVRQGRFDLLGVLLFPTIITALLYWLSVAGQDFAWLSATSLG
FMGFICVGALVLLWWERRRESPFLPLDLLANKAIYMPLFTAALFAACLFAMIFFLPIYLQVGLHTNPAKTGLLLMPMTFG
IVTGSTIAGRLLSRDVAPKWLPTFGMGLAFIGLLLIGLVPPNANLIGALGVLVGIGLGTVMPSVQLVVQSVSGKARLSQI
TAMVSLSRSMGAAIGTALFSLLLYGLLPLDGAQVGIAAIKQLPIEVVHHAFQWGFIAAALVALSSAIVGYLSPATALRDH
E

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. EmrB family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=410, Percent_Identity=29.2682926829268, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790195, Length=317, Percent_Identity=27.7602523659306, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1789042, Length=328, Percent_Identity=25.9146341463415, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1788392, Length=339, Percent_Identity=29.7935103244838, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1788710, Length=319, Percent_Identity=25.3918495297806, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1788509, Length=168, Percent_Identity=27.3809523809524, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323735, Length=323, Percent_Identity=25.3869969040248, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6322958, Length=463, Percent_Identity=23.5421166306695, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6325455, Length=426, Percent_Identity=23.7089201877934, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321663, Length=152, Percent_Identity=32.2368421052632, Blast_Score=90, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6319770, Length=383, Percent_Identity=25.065274151436, Blast_Score=81, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6324415, Length=445, Percent_Identity=23.3707865168539, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004638
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51359; Mature: 51228

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPASASSPHEPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWIT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH
IGYMLAMAASVPIYGWLGDNYGRAKILMIALVVFALGSIVSASAGTMDHMIAGRILQGLG
HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GGGLMSLSQSLVGELVPIRQRARFQGYFAAMFTLASVGGPVIGGFVVHAYSWHWLFWANI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PLVMLAVWRLNRLHKQSVKPVRQGRFDLLGVLLFPTIITALLYWLSVAGQDFAWLSATSL
HHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GFMGFICVGALVLLWWERRRESPFLPLDLLANKAIYMPLFTAALFAACLFAMIFFLPIYL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVGLHTNPAKTGLLLMPMTFGIVTGSTIAGRLLSRDVAPKWLPTFGMGLAFIGLLLIGLV
HHCCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PPNANLIGALGVLVGIGLGTVMPSVQLVVQSVSGKARLSQITAMVSLSRSMGAAIGTALF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLLYGLLPLDGAQVGIAAIKQLPIEVVHHAFQWGFIAAALVALSSAIVGYLSPATALRD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
HE
CC
>Mature Secondary Structure 
TPASASSPHEPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWIT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]