| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is fcuA [H]
Identifier: 116696412
GI number: 116696412
Start: 2799536
End: 2801698
Strand: Direct
Name: fcuA [H]
Synonym: H16_B2476
Alternate gene names: 116696412
Gene position: 2799536-2801698 (Clockwise)
Preceding gene: 116696409
Following gene: 116696417
Centisome position: 96.12
GC content: 66.07
Gene sequence:
>2163_bases ATGAATCGTCAAGTCATTCGCGCCGCGCGCCTGCGCGCACCCATGCCCCGCCATCTCGCCGTGCTGGCACAACTGGCTGT CGTGGTCGGCTTTCCGGCAACCGCCGCGCTGGCACAGCAAGCCGCGGCGCCGGCGGATGCGCAGTCGCTGCCCGCGGTGA CCGTCAGCGCCTCGGCGGTCGACGATTCCGGCCTGCAGCTTGAGAAAAAGGCCAGCACCGGCGCGCTGGGCTCGCGCACG CAGCTCGACACCCCGTACTCCACCACCATCGTCACCGGCGAAGACCTTGCTGAGCGCCAGGTGGCCAAGCTGGGCGATGT GTTTGCGATGGATGCGTCGGTCAGCGACAACGGCAACGGCTACAACAGCTGGTCCAGCTACCTGAGCGTGCGCGGCCTGC AGATCGACTGGCAGAACGGCTTCAAGATCAACGGGCTGCCGTTCGTGGCCTACGGCATCACGCTGCCCTACGAGCACATG GAGCAAGTGGAACTGCTCAAGGGGCTGCCGGGCTTCATGTACGGCTTCGCCACCCCGGGCGGCATCGTCAACTACGTCAC CAAGAAGCCGACCGACACCTTCTCCGCCTCGTTCGAACTGGGCTACCGCGCCGCCAATGTCTGGAGCGAGCACGTCGACC TGGGCGGGCGCGCCGGCCCGAACAATATGTTCGGCTACCGCCTGAACGTGACGCACGAGGAAGGCACGCCCTACAACGCG CGCAATATCAAGCGCGACAGCGCCTCGCTGGGCCTGGATGCGCGCCTGACCAGGGACCTGACCTGGACCTTCGACTCGAT CTACCAGGACCGTCGCGCCACTGGCCAGATGCCGTCGTTCAGTCTGTGGAGCTACGGCGACACGGCCCTGCCGGCCGCGG TGTCCGGCCGCATCCGCAACTTCGCCGGTGCCGACCAGCACCTGAACACCAACCTGCAGCTGTACAGCACCGGCCTGCGC TACCAGATCAATCCGGACTGGGCGGTGAGCACAAACTACAGCTTCACCAAGGTCAACCGCAGCCGCAACGAAAGCACCTA CAACCTGCTGAACCAGGCCGGCGACTACAGCGACCAGCGCTACGACACCGCGCAGAACCAGCAGGTGGGCCAATGGCAGG CGATGCTGGAAGGCAAGTTCCGCACCGGGCCGTTCGGGCACCAGCTGGTGGCGGGCCTGTCGTGGCAGAAGCAGATCGAC CGCTATGACAACAACGGCTTCGGCGCCGTCATCGGCGCCGGCAATATCTTCGAGCCCAACACCAACACGTACTTCAGCTC GACCGCCTTCAACAAGGTGCGCAACAGCGACATCACGCAGAAGTCGGTGTTCGCCAGCGACACCGTCCAGCTGAGCGAGC GCTGGTCGGTGCTGGCCGGCCTGCGCGTGACCAACTTCGAGCAGAACGGCTACGTGCCGGTGAGCTCCAGCTACAGCAAG AACGGCGTGGTCACGCCCACGCTGGCGCTGATGTTCAAGCCCGTGCCCACGGCCACGGTCTACGCCAGCTACGTGGAAGC GCTGGAGCCCGGCTCGATCGTGCCGGATGGCTACACCAACGCTCGCCAGCTGCTCAGCCCGATCCGCAGCAAGCAGTATG AAGTCGGCGTCAAGGCCGACCAGGCCGCCTGGAGCGCCACCGCCGCCGCCTTCCGCATCGAGCGCGGCGCCGAGTACGAC AGCATCAACGGCGGCGTGCCGACGCGCCAGCAGGACGGCACCTCGATCTACCAGGGGCTGGAACTGGCCGGCGTGTACCG GCTGGGCCCGCAGTGGGAATTCGGCGCGAGCGCGATGTACCTGGACTCGTACTACGACAAGGGCCTGGCCAACAACGGCA AGCGCGTCGCCGGTGCGCCTGACCTGGTGCTGGCCGGACGCATCAGCTACCGCGTGCCGTTCGTGCCCGGCCTGCGCCTT GGCGTCGATGGCAAGTACACCGGCAATACCAAGCTGAACGCGGGCAATACGCTGGAGGCCGGCGGCTACACGGTGTTCAA TCTCGGCGCGAGCTACAACACCCGCGTCGCCGGCAAGGACCTGACGCTGCGCGCCGCGCTGAATAACGTGACCAACAAGC GCTACTGGGGCTTCCAGTACGAGAACTACATCCAGCCCGCGGATCCGCGCAGCGTGAGCCTGACGGCGAAGATTGCGTAT TGA
Upstream 100 bases:
>100_bases ACGCTAGCATCATTCGGTCTTTTCATAAATGCGAATTATTCGCATTTGTACCTACATTTACATACAGGCTTGCCTGTCTC CTGCCCCGGCGGGTCCCCTC
Downstream 100 bases:
>100_bases GATTGGCCGGACTGCAAGGCCGCCCGCAGAAGCCCCGCTTCTGCGGACGCCTGCCTTCAGTCGACCTTGACGTCCAGGTC TTTCACGACGCCAGCCCATT
Product: outer membrane receptor, TonB dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MNRQVIRAARLRAPMPRHLAVLAQLAVVVGFPATAALAQQAAAPADAQSLPAVTVSASAVDDSGLQLEKKASTGALGSRT QLDTPYSTTIVTGEDLAERQVAKLGDVFAMDASVSDNGNGYNSWSSYLSVRGLQIDWQNGFKINGLPFVAYGITLPYEHM EQVELLKGLPGFMYGFATPGGIVNYVTKKPTDTFSASFELGYRAANVWSEHVDLGGRAGPNNMFGYRLNVTHEEGTPYNA RNIKRDSASLGLDARLTRDLTWTFDSIYQDRRATGQMPSFSLWSYGDTALPAAVSGRIRNFAGADQHLNTNLQLYSTGLR YQINPDWAVSTNYSFTKVNRSRNESTYNLLNQAGDYSDQRYDTAQNQQVGQWQAMLEGKFRTGPFGHQLVAGLSWQKQID RYDNNGFGAVIGAGNIFEPNTNTYFSSTAFNKVRNSDITQKSVFASDTVQLSERWSVLAGLRVTNFEQNGYVPVSSSYSK NGVVTPTLALMFKPVPTATVYASYVEALEPGSIVPDGYTNARQLLSPIRSKQYEVGVKADQAAWSATAAAFRIERGAEYD SINGGVPTRQQDGTSIYQGLELAGVYRLGPQWEFGASAMYLDSYYDKGLANNGKRVAGAPDLVLAGRISYRVPFVPGLRL GVDGKYTGNTKLNAGNTLEAGGYTVFNLGASYNTRVAGKDLTLRAALNNVTNKRYWGFQYENYIQPADPRSVSLTAKIAY
Sequences:
>Translated_720_residues MNRQVIRAARLRAPMPRHLAVLAQLAVVVGFPATAALAQQAAAPADAQSLPAVTVSASAVDDSGLQLEKKASTGALGSRT QLDTPYSTTIVTGEDLAERQVAKLGDVFAMDASVSDNGNGYNSWSSYLSVRGLQIDWQNGFKINGLPFVAYGITLPYEHM EQVELLKGLPGFMYGFATPGGIVNYVTKKPTDTFSASFELGYRAANVWSEHVDLGGRAGPNNMFGYRLNVTHEEGTPYNA RNIKRDSASLGLDARLTRDLTWTFDSIYQDRRATGQMPSFSLWSYGDTALPAAVSGRIRNFAGADQHLNTNLQLYSTGLR YQINPDWAVSTNYSFTKVNRSRNESTYNLLNQAGDYSDQRYDTAQNQQVGQWQAMLEGKFRTGPFGHQLVAGLSWQKQID RYDNNGFGAVIGAGNIFEPNTNTYFSSTAFNKVRNSDITQKSVFASDTVQLSERWSVLAGLRVTNFEQNGYVPVSSSYSK NGVVTPTLALMFKPVPTATVYASYVEALEPGSIVPDGYTNARQLLSPIRSKQYEVGVKADQAAWSATAAAFRIERGAEYD SINGGVPTRQQDGTSIYQGLELAGVYRLGPQWEFGASAMYLDSYYDKGLANNGKRVAGAPDLVLAGRISYRVPFVPGLRL GVDGKYTGNTKLNAGNTLEAGGYTVFNLGASYNTRVAGKDLTLRAALNNVTNKRYWGFQYENYIQPADPRSVSLTAKIAY >Mature_720_residues MNRQVIRAARLRAPMPRHLAVLAQLAVVVGFPATAALAQQAAAPADAQSLPAVTVSASAVDDSGLQLEKKASTGALGSRT QLDTPYSTTIVTGEDLAERQVAKLGDVFAMDASVSDNGNGYNSWSSYLSVRGLQIDWQNGFKINGLPFVAYGITLPYEHM EQVELLKGLPGFMYGFATPGGIVNYVTKKPTDTFSASFELGYRAANVWSEHVDLGGRAGPNNMFGYRLNVTHEEGTPYNA RNIKRDSASLGLDARLTRDLTWTFDSIYQDRRATGQMPSFSLWSYGDTALPAAVSGRIRNFAGADQHLNTNLQLYSTGLR YQINPDWAVSTNYSFTKVNRSRNESTYNLLNQAGDYSDQRYDTAQNQQVGQWQAMLEGKFRTGPFGHQLVAGLSWQKQID RYDNNGFGAVIGAGNIFEPNTNTYFSSTAFNKVRNSDITQKSVFASDTVQLSERWSVLAGLRVTNFEQNGYVPVSSSYSK NGVVTPTLALMFKPVPTATVYASYVEALEPGSIVPDGYTNARQLLSPIRSKQYEVGVKADQAAWSATAAAFRIERGAEYD SINGGVPTRQQDGTSIYQGLELAGVYRLGPQWEFGASAMYLDSYYDKGLANNGKRVAGAPDLVLAGRISYRVPFVPGLRL GVDGKYTGNTKLNAGNTLEAGGYTVFNLGASYNTRVAGKDLTLRAALNNVTNKRYWGFQYENYIQPADPRSVSLTAKIAY
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=750, Percent_Identity=22.9333333333333, Blast_Score=96, Evalue=9e-21, Organism=Escherichia coli, GI1787344, Length=751, Percent_Identity=25.0332889480692, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78562; Mature: 78562
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRQVIRAARLRAPMPRHLAVLAQLAVVVGFPATAALAQQAAAPADAQSLPAVTVSASAV CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCEEEEEECCC DDSGLQLEKKASTGALGSRTQLDTPYSTTIVTGEDLAERQVAKLGDVFAMDASVSDNGNG CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCC YNSWSSYLSVRGLQIDWQNGFKINGLPFVAYGITLPYEHMEQVELLKGLPGFMYGFATPG CCHHHHHHEEECEEEECCCCEEECCCEEEEEEEECCHHHHHHHHHHHCCCCHHHHCCCCC GIVNYVTKKPTDTFSASFELGYRAANVWSEHVDLGGRAGPNNMFGYRLNVTHEEGTPYNA CCEEHEECCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCC RNIKRDSASLGLDARLTRDLTWTFDSIYQDRRATGQMPSFSLWSYGDTALPAAVSGRIRN CCCCCCCHHCCCCEEEECCEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHH FAGADQHLNTNLQLYSTGLRYQINPDWAVSTNYSFTKVNRSRNESTYNLLNQAGDYSDQR CCCCCCCCCCCEEEEECCCEEEECCCEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCC YDTAQNQQVGQWQAMLEGKFRTGPFGHQLVAGLSWQKQIDRYDNNGFGAVIGAGNIFEPN CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEECCC TNTYFSSTAFNKVRNSDITQKSVFASDTVQLSERWSVLAGLRVTNFEQNGYVPVSSSYSK CCCEECHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCC NGVVTPTLALMFKPVPTATVYASYVEALEPGSIVPDGYTNARQLLSPIRSKQYEVGVKAD CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCC QAAWSATAAAFRIERGAEYDSINGGVPTRQQDGTSIYQGLELAGVYRLGPQWEFGASAMY HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHCHHEEEEEECCCCCCCCCCEEE LDSYYDKGLANNGKRVAGAPDLVLAGRISYRVPFVPGLRLGVDGKYTGNTKLNAGNTLEA EHHHHCCCCCCCCCEECCCCCEEEECCEEEECCCCCCEEECCCCEECCCCEECCCCEECC GGYTVFNLGASYNTRVAGKDLTLRAALNNVTNKRYWGFQYENYIQPADPRSVSLTAKIAY CCEEEEEECCCCCCEECCCCEEEEEHHHHCCCCEEECCCHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MNRQVIRAARLRAPMPRHLAVLAQLAVVVGFPATAALAQQAAAPADAQSLPAVTVSASAV CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCEEEEEECCC DDSGLQLEKKASTGALGSRTQLDTPYSTTIVTGEDLAERQVAKLGDVFAMDASVSDNGNG CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCC YNSWSSYLSVRGLQIDWQNGFKINGLPFVAYGITLPYEHMEQVELLKGLPGFMYGFATPG CCHHHHHHEEECEEEECCCCEEECCCEEEEEEEECCHHHHHHHHHHHCCCCHHHHCCCCC GIVNYVTKKPTDTFSASFELGYRAANVWSEHVDLGGRAGPNNMFGYRLNVTHEEGTPYNA CCEEHEECCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCC RNIKRDSASLGLDARLTRDLTWTFDSIYQDRRATGQMPSFSLWSYGDTALPAAVSGRIRN CCCCCCCHHCCCCEEEECCEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHH FAGADQHLNTNLQLYSTGLRYQINPDWAVSTNYSFTKVNRSRNESTYNLLNQAGDYSDQR CCCCCCCCCCCEEEEECCCEEEECCCEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCC YDTAQNQQVGQWQAMLEGKFRTGPFGHQLVAGLSWQKQIDRYDNNGFGAVIGAGNIFEPN CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEECCC TNTYFSSTAFNKVRNSDITQKSVFASDTVQLSERWSVLAGLRVTNFEQNGYVPVSSSYSK CCCEECHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCC NGVVTPTLALMFKPVPTATVYASYVEALEPGSIVPDGYTNARQLLSPIRSKQYEVGVKAD CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCC QAAWSATAAAFRIERGAEYDSINGGVPTRQQDGTSIYQGLELAGVYRLGPQWEFGASAMY HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHCHHEEEEEECCCCCCCCCCEEE LDSYYDKGLANNGKRVAGAPDLVLAGRISYRVPFVPGLRLGVDGKYTGNTKLNAGNTLEA EHHHHCCCCCCCCCEECCCCCEEEECCEEEECCCCCCEEECCCCEECCCCEECCCCEECC GGYTVFNLGASYNTRVAGKDLTLRAALNNVTNKRYWGFQYENYIQPADPRSVSLTAKIAY CCEEEEEECCCCCCEECCCCEEEEEHHHHCCCCEEECCCHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]