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The map label for this gene is tauC1 [H]

Identifier: 116696160

GI number: 116696160

Start: 2522773

End: 2523609

Strand: Direct

Name: tauC1 [H]

Synonym: H16_B2224

Alternate gene names: 116696160

Gene position: 2522773-2523609 (Clockwise)

Preceding gene: 116696159

Following gene: 116696161

Centisome position: 86.62

GC content: 70.85

Gene sequence:

>837_bases
ATGTCCGTCGCCGAATCGCTTTCACTGCCCGCCGCAGCAGCACCGCGCGCGCCTTCCTCACGCAAGCCACTGCGCTGGCA
GGATGCCACACGCTGGCTGCTGGCCTGGCCGGTGCCGCTGGCGCTGCTGCTGGTTTGGTACGTGGCCGCCCGCAATGCCT
GGATTCCGCCGCAGGTGCTGCCCGCACCCGAAGACGTCGCACGCACGCTGGCCGACCTCTGGCAAAGCGGGGAACTGCAG
GCCAACCTGGCCATCAGCGCGCTGCGCGTGGCCGGCGGCTTCGCCGTGGGGCTGGCCGGCGGCCTGGCGCTGGGCGCGGC
CATGGGCCTGTCGCCGACGTTGCGCGACTACGTCTACCCGACCTTCAAGGCGTTCAGCCAGGTGCCGGTGCTGGGCTGGC
TGCCGCTGCTGATGCTGCTGGTCGGCATCGACGAAGCGCTCAAGGTGATCCTGATCGCCAAGGCCGCCTTCGTGCCGGTG
GCGCTGAACACGTACAAGGGCATCGGCAGCGTGCCGACCCGCTACCTGGAAGTGGCGCGGGTGCTGCAGCTCACGCGCTG
GCAGACGCTGTCGCGCGTGGTGCTGCCCGCCGCGGCCGCGCCGGTGTGGAACGGCGTGCGCTACGGCCTTACGCACGCAT
GGCTGGCGCTGGTGGTGGTGGAGCTGCTGGCCTCGTCCGAGGGGCTGGGCTACATGATCGTCTACGGGCGCCAGCTGTTC
CAGCTCGACATGGTGCTGGCCGCCGTGGTGGTGGTGGGCGTGGTGGGCTTTGCGCTGGACAAGACGCTGGCGCTGGCCGA
AGGCGCGGTGCTGCGCTGGCGCAAGCCGGGCTTCTGA

Upstream 100 bases:

>100_bases
ATCGACCAGCGCTTCCTGAAGGCCGCACTCAACGACCTGAGCCTGCAGAGCTACTGGCCCGTCTACCAGCCCAACGGCAA
GATCCTGGGAGCCTGACACC

Downstream 100 bases:

>100_bases
GGCGAGGCCGCGATGACCACGTCCGCTATCCGCCCCCGTATTCGCCTGCACCGCGCCTTGCGCGGCTGGGTGCTGCCGCT
CGCGCTGCTCGCGCTGTGGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSVAESLSLPAAAAPRAPSSRKPLRWQDATRWLLAWPVPLALLLVWYVAARNAWIPPQVLPAPEDVARTLADLWQSGELQ
ANLAISALRVAGGFAVGLAGGLALGAAMGLSPTLRDYVYPTFKAFSQVPVLGWLPLLMLLVGIDEALKVILIAKAAFVPV
ALNTYKGIGSVPTRYLEVARVLQLTRWQTLSRVVLPAAAAPVWNGVRYGLTHAWLALVVVELLASSEGLGYMIVYGRQLF
QLDMVLAAVVVVGVVGFALDKTLALAEGAVLRWRKPGF

Sequences:

>Translated_278_residues
MSVAESLSLPAAAAPRAPSSRKPLRWQDATRWLLAWPVPLALLLVWYVAARNAWIPPQVLPAPEDVARTLADLWQSGELQ
ANLAISALRVAGGFAVGLAGGLALGAAMGLSPTLRDYVYPTFKAFSQVPVLGWLPLLMLLVGIDEALKVILIAKAAFVPV
ALNTYKGIGSVPTRYLEVARVLQLTRWQTLSRVVLPAAAAPVWNGVRYGLTHAWLALVVVELLASSEGLGYMIVYGRQLF
QLDMVLAAVVVVGVVGFALDKTLALAEGAVLRWRKPGF
>Mature_277_residues
SVAESLSLPAAAAPRAPSSRKPLRWQDATRWLLAWPVPLALLLVWYVAARNAWIPPQVLPAPEDVARTLADLWQSGELQA
NLAISALRVAGGFAVGLAGGLALGAAMGLSPTLRDYVYPTFKAFSQVPVLGWLPLLMLLVGIDEALKVILIAKAAFVPVA
LNTYKGIGSVPTRYLEVARVLQLTRWQTLSRVVLPAAAAPVWNGVRYGLTHAWLALVVVELLASSEGLGYMIVYGRQLFQ
LDMVLAAVVVVGVVGFALDKTLALAEGAVLRWRKPGF

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=34.0080971659919, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1786564, Length=253, Percent_Identity=34.3873517786561, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29835; Mature: 29704

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAESLSLPAAAAPRAPSSRKPLRWQDATRWLLAWPVPLALLLVWYVAARNAWIPPQVL
CCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PAPEDVARTLADLWQSGELQANLAISALRVAGGFAVGLAGGLALGAAMGLSPTLRDYVYP
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TFKAFSQVPVLGWLPLLMLLVGIDEALKVILIAKAAFVPVALNTYKGIGSVPTRYLEVAR
HHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLQLTRWQTLSRVVLPAAAAPVWNGVRYGLTHAWLALVVVELLASSEGLGYMIVYGRQLF
HHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
QLDMVLAAVVVVGVVGFALDKTLALAEGAVLRWRKPGF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCC
>Mature Secondary Structure 
SVAESLSLPAAAAPRAPSSRKPLRWQDATRWLLAWPVPLALLLVWYVAARNAWIPPQVL
CCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PAPEDVARTLADLWQSGELQANLAISALRVAGGFAVGLAGGLALGAAMGLSPTLRDYVYP
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TFKAFSQVPVLGWLPLLMLLVGIDEALKVILIAKAAFVPVALNTYKGIGSVPTRYLEVAR
HHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLQLTRWQTLSRVVLPAAAAPVWNGVRYGLTHAWLALVVVELLASSEGLGYMIVYGRQLF
HHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
QLDMVLAAVVVVGVVGFALDKTLALAEGAVLRWRKPGF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]