| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is tauA [H]
Identifier: 116696159
GI number: 116696159
Start: 2521639
End: 2522643
Strand: Direct
Name: tauA [H]
Synonym: H16_B2223
Alternate gene names: 116696159
Gene position: 2521639-2522643 (Clockwise)
Preceding gene: 116696151
Following gene: 116696160
Centisome position: 86.58
GC content: 70.25
Gene sequence:
>1005_bases ATGACGACCCCGCGCCCAGATGCCACCGCTGCACCCACGCTGACCCGCCGCGAGCTGCTGCGCTGCGCGGCCTGGTCCGG GCTGGGCATGGCCGCGTCGCTGTCGCCGCTGTCCGCGTTCAGCGCCAGCCCGGCCGCGCGGCCCGACGTGATCCGCGTCG GCGTGGCCCAGCCCGCCACCGGCACCCCGCCCGGCTTTGCCGGCAGTTCGCTGGCGATTGCCCATGCGCGCGGCTGGCTC GAGGAATCGTTCAAGCCGACCGGCACGCGCGTGGAGTGGTTTTTCTTCAAGGGCGCCGGCCCCGCCGTCAACGAGGCGCT GGCCAACCGCCAGCTCGACTTCGCGCTGCAGGGCGACCTGCCGTCCATCGTGGCGCGCTCCGCGGGCCTGAAGACGCGGC TGGTGCTGGCCACTGGAGTGCGCGCCAACATCTACGTGGGGGTGCCGCCCGATTCGCCGCTGAAGACGGTCAGCGACCTG CGCGGCAAGCGCGTGTCGCTGTTCAAGGGCACCAACATGCATCTGCCGGCGCTGCGCCTGCTGGAAGCGAACGGGCTGTC GGACAAGGACCTGCGCCTGCTCAACCTGGACACGGCCGGCTACCTGGCGGCGCTGTCCACGCGCGACATCGACGCCGCCA TCGGCGCCATGGACATCCTGCGCCTGCGCGACAAGGGCGCGGTGCGCATCCTGTACTCCAGCAAGAACCAGTCGCCGATC TACACACGGCAAAGCCACGTACTGGTGAGCGACGATTTCGCCGGGCGCTATCCGGAAGCCACGCAGCACCTGGTGAAGGC CGCGGTCGAGGCGGCGCGGTGGGCCTCGGACGAGAGCCATCGCGAGGAGGTGCTGCGCACCTGGGCGCGCGCGGGTACGC CTTATGACCACTGGAAGGAGGACTTCGACGGCGAGCCGCTGCGGGTGCGGCTGAACCCGAATTTCGATCCCTTCCTGGTC AGCCGCCCAAGGATGCGGTCGAGCAGGCCTATCGCTTCAAACTGA
Upstream 100 bases:
>100_bases TATGCGCGGGGCCGATAACCAAAGCCGGAATCATTCGTTCAGGTCCGCGCGCCGCGCCGCTTATCGTGGAGCCGTCCTCC ACTTCAAGAAGGTCTGCACG
Downstream 100 bases:
>100_bases GCCGTACGCGCTTTGACGTGGACCAGTGGATCGACCAGCGCTTCCTGAAGGCCGCACTCAACGACCTGAGCCTGCAGAGC TACTGGCCCGTCTACCAGCC
Product: ABC transporter periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTTPRPDATAAPTLTRRELLRCAAWSGLGMAASLSPLSAFSASPAARPDVIRVGVAQPATGTPPGFAGSSLAIAHARGWL EESFKPTGTRVEWFFFKGAGPAVNEALANRQLDFALQGDLPSIVARSAGLKTRLVLATGVRANIYVGVPPDSPLKTVSDL RGKRVSLFKGTNMHLPALRLLEANGLSDKDLRLLNLDTAGYLAALSTRDIDAAIGAMDILRLRDKGAVRILYSSKNQSPI YTRQSHVLVSDDFAGRYPEATQHLVKAAVEAARWASDESHREEVLRTWARAGTPYDHWKEDFDGEPLRVRLNPNFDPFLV SRPRMRSSRPIASN
Sequences:
>Translated_334_residues MTTPRPDATAAPTLTRRELLRCAAWSGLGMAASLSPLSAFSASPAARPDVIRVGVAQPATGTPPGFAGSSLAIAHARGWL EESFKPTGTRVEWFFFKGAGPAVNEALANRQLDFALQGDLPSIVARSAGLKTRLVLATGVRANIYVGVPPDSPLKTVSDL RGKRVSLFKGTNMHLPALRLLEANGLSDKDLRLLNLDTAGYLAALSTRDIDAAIGAMDILRLRDKGAVRILYSSKNQSPI YTRQSHVLVSDDFAGRYPEATQHLVKAAVEAARWASDESHREEVLRTWARAGTPYDHWKEDFDGEPLRVRLNPNFDPFLV SRPRMRSSRPIASN >Mature_333_residues TTPRPDATAAPTLTRRELLRCAAWSGLGMAASLSPLSAFSASPAARPDVIRVGVAQPATGTPPGFAGSSLAIAHARGWLE ESFKPTGTRVEWFFFKGAGPAVNEALANRQLDFALQGDLPSIVARSAGLKTRLVLATGVRANIYVGVPPDSPLKTVSDLR GKRVSLFKGTNMHLPALRLLEANGLSDKDLRLLNLDTAGYLAALSTRDIDAAIGAMDILRLRDKGAVRILYSSKNQSPIY TRQSHVLVSDDFAGRYPEATQHLVKAAVEAARWASDESHREEVLRTWARAGTPYDHWKEDFDGEPLRVRLNPNFDPFLVS RPRMRSSRPIASN
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=197, Percent_Identity=29.4416243654822, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 36289; Mature: 36157
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRPDATAAPTLTRRELLRCAAWSGLGMAASLSPLSAFSASPAARPDVIRVGVAQPAT CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCCCCEEEEECCCCCC GTPPGFAGSSLAIAHARGWLEESFKPTGTRVEWFFFKGAGPAVNEALANRQLDFALQGDL CCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCC PSIVARSAGLKTRLVLATGVRANIYVGVPPDSPLKTVSDLRGKRVSLFKGTNMHLPALRL HHHHHHHCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHEE LEANGLSDKDLRLLNLDTAGYLAALSTRDIDAAIGAMDILRLRDKGAVRILYSSKNQSPI EECCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC YTRQSHVLVSDDFAGRYPEATQHLVKAAVEAARWASDESHREEVLRTWARAGTPYDHWKE EECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHH DFDGEPLRVRLNPNFDPFLVSRPRMRSSRPIASN CCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure TTPRPDATAAPTLTRRELLRCAAWSGLGMAASLSPLSAFSASPAARPDVIRVGVAQPAT CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCCCCEEEEECCCCCC GTPPGFAGSSLAIAHARGWLEESFKPTGTRVEWFFFKGAGPAVNEALANRQLDFALQGDL CCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCC PSIVARSAGLKTRLVLATGVRANIYVGVPPDSPLKTVSDLRGKRVSLFKGTNMHLPALRL HHHHHHHCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHEE LEANGLSDKDLRLLNLDTAGYLAALSTRDIDAAIGAMDILRLRDKGAVRILYSSKNQSPI EECCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC YTRQSHVLVSDDFAGRYPEATQHLVKAAVEAARWASDESHREEVLRTWARAGTPYDHWKE EECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHH DFDGEPLRVRLNPNFDPFLVSRPRMRSSRPIASN CCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]