| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is bcsP31 [H]
Identifier: 116696079
GI number: 116696079
Start: 2423868
End: 2425430
Strand: Direct
Name: bcsP31 [H]
Synonym: H16_B2143
Alternate gene names: 116696079
Gene position: 2423868-2425430 (Clockwise)
Preceding gene: 116696078
Following gene: 116696082
Centisome position: 83.22
GC content: 73.19
Gene sequence:
>1563_bases ATGCGCCGCGCCCTCTTCACCCTCCTCATTGCCTTGGTGGCCAGCGCCTGGCTGGCAGGCTGCGGCGGCGGCCCGCCCGC CGACGGCATCCGCGCCGGCATCAACGAGCGGCTGGCGCAGGCGCTGCCGCCGGGCACGGTGGAACTGGCCGGCCTGGACC GGCGCGGCTCGCAGGCAGACACCAAGGCCCCGGCCGGTGAAACCCGCCGCGTGGTGTACTTCGATGCGGAACTGAAACTG CTGCGCGACTACGACTTCGGCGCCTGGGACTCGCCCGGCGTGGCCGGGCTGGTGTCGGCGCTGGGCGCGGGCCCGCGCGG CATCACCGGCATCACCAGCGGCGGCAACAAGGCCGGCGACATCATCCGCGCGCATGGCACGGCGCTGTACCGGCGCGACG GCGAGCGCTGGGTCGGCGTGCTGCCGGCCGGCTACCGCCCCGCTGAAGCCCCGACCGTCGCCACCGATGCGCAAAGGGGC CCGGCGGCGATCCTGGACGCGATGCGCAAGGTGATCGAGTCCGTGCAGAAGGATGCCTCGCCGGCGCAGCGCGCCGTGAT CGAGCAGGAGCTGACCACCGCGCACGCCAACATCCGCGCGCGGCTGGCACGGGTCAACGAGGGCTATGCCATTGCCGCCG GCGCCGAACACGGCCAGTACCTGCGCTTCGCGAAGGCGCTGGTGGACGGGGCACGCGTGCGCGCGATGCCGCTGGTCACG CACGGCGGAGAAGAGAACCTGCGGCTGCTGCGCGCCGGCAAGGTCTCGGTGGCGCTGGCGCAGGGCGATGCGGCGCTGGA AGCCTACGAGGGCAAGGGCGTGTTTGCCGCCGACGGCCCGCAAGCCTCGCTGCGCGCCATCGGCAGCCTCTACCCCGAGC CCGTGCACGTGCTGGTGCGCGACGCCGATCCCGCCCGCTCGGTGTCAGAGCTGCGCGGCAAGCGCATCGCCGTGGGCGAG CGCGGCTCAGCCTCGCGCGTGACCGCGCTGCGTGTGCTGGCTGCGCATGGCCTGACCGACAAGGACTTCAAGGCCGAGGA AGTTGGGCTGGGCACCGGGCTGGTGGCGCTGCGCCAGAAGCAGGTCGACGCGGTGATCCAGGTGATCGGCGTGCCGGCCG ACAGCATCCGCGACGCGCTCGGCGAAATGCCGCTGCGGCTGCTGCCGCTGGACGAACGGGTCATCACCGCGATGGTCGGG CAGAAGGCGGGCTATTTCCGCGCCACCATCGCGCCGGGCACCTATCCCGGCCTGCACACGCCGGTGCGCACCATCGCCAC GGCGGCGATCCTGGTGACCGGGCCGGACCTGTCCGATACCGAAGTGGCCGAGCTGACGCGGCTGGTCTACCGCCACGGGC GCGACTTTGTCGCCCGCGGCAGCGCCCAGGGCGCGCAGATTGCCGTGGCAACGGCGCGTGAAGGGCTGATGATCCCGCAG CATCTGGCGGCGGCCAAGGCGCTGGACGCGCTGGCGACACCCGGCATTCCGCCCGCCAAGCCCGGCGGAACGCCCGCGAA GCCCGTTGCAACGCCTGCGGCTTCGGGCGCCCGTGCGCAGTAA
Upstream 100 bases:
>100_bases AGCTATTTGATCACGCCGCTGGCCGGCGCGTTCTTCGTCGACCTGATGAACGCCTTCGTGCTGACCATGCTGCTGGCGTT GCCGCTGATCGGAGGCTGAC
Downstream 100 bases:
>100_bases GGCCCGGCGGGCGGGCCGCCGATCAGCCCGCCGCGCTCGCCAGGCCTTCAGCCAGCCGGCAGCGCCGGTCCAGGAAATCG CTGGCGTGGCCGTTGCTGCC
Product: TRAP-type transporter, periplasmic component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MRRALFTLLIALVASAWLAGCGGGPPADGIRAGINERLAQALPPGTVELAGLDRRGSQADTKAPAGETRRVVYFDAELKL LRDYDFGAWDSPGVAGLVSALGAGPRGITGITSGGNKAGDIIRAHGTALYRRDGERWVGVLPAGYRPAEAPTVATDAQRG PAAILDAMRKVIESVQKDASPAQRAVIEQELTTAHANIRARLARVNEGYAIAAGAEHGQYLRFAKALVDGARVRAMPLVT HGGEENLRLLRAGKVSVALAQGDAALEAYEGKGVFAADGPQASLRAIGSLYPEPVHVLVRDADPARSVSELRGKRIAVGE RGSASRVTALRVLAAHGLTDKDFKAEEVGLGTGLVALRQKQVDAVIQVIGVPADSIRDALGEMPLRLLPLDERVITAMVG QKAGYFRATIAPGTYPGLHTPVRTIATAAILVTGPDLSDTEVAELTRLVYRHGRDFVARGSAQGAQIAVATAREGLMIPQ HLAAAKALDALATPGIPPAKPGGTPAKPVATPAASGARAQ
Sequences:
>Translated_520_residues MRRALFTLLIALVASAWLAGCGGGPPADGIRAGINERLAQALPPGTVELAGLDRRGSQADTKAPAGETRRVVYFDAELKL LRDYDFGAWDSPGVAGLVSALGAGPRGITGITSGGNKAGDIIRAHGTALYRRDGERWVGVLPAGYRPAEAPTVATDAQRG PAAILDAMRKVIESVQKDASPAQRAVIEQELTTAHANIRARLARVNEGYAIAAGAEHGQYLRFAKALVDGARVRAMPLVT HGGEENLRLLRAGKVSVALAQGDAALEAYEGKGVFAADGPQASLRAIGSLYPEPVHVLVRDADPARSVSELRGKRIAVGE RGSASRVTALRVLAAHGLTDKDFKAEEVGLGTGLVALRQKQVDAVIQVIGVPADSIRDALGEMPLRLLPLDERVITAMVG QKAGYFRATIAPGTYPGLHTPVRTIATAAILVTGPDLSDTEVAELTRLVYRHGRDFVARGSAQGAQIAVATAREGLMIPQ HLAAAKALDALATPGIPPAKPGGTPAKPVATPAASGARAQ >Mature_520_residues MRRALFTLLIALVASAWLAGCGGGPPADGIRAGINERLAQALPPGTVELAGLDRRGSQADTKAPAGETRRVVYFDAELKL LRDYDFGAWDSPGVAGLVSALGAGPRGITGITSGGNKAGDIIRAHGTALYRRDGERWVGVLPAGYRPAEAPTVATDAQRG PAAILDAMRKVIESVQKDASPAQRAVIEQELTTAHANIRARLARVNEGYAIAAGAEHGQYLRFAKALVDGARVRAMPLVT HGGEENLRLLRAGKVSVALAQGDAALEAYEGKGVFAADGPQASLRAIGSLYPEPVHVLVRDADPARSVSELRGKRIAVGE RGSASRVTALRVLAAHGLTDKDFKAEEVGLGTGLVALRQKQVDAVIQVIGVPADSIRDALGEMPLRLLPLDERVITAMVG QKAGYFRATIAPGTYPGLHTPVRTIATAAILVTGPDLSDTEVAELTRLVYRHGRDFVARGSAQGAQIAVATAREGLMIPQ HLAAAKALDALATPGIPPAKPGGTPAKPVATPAASGARAQ
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 54027; Mature: 54027
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRALFTLLIALVASAWLAGCGGGPPADGIRAGINERLAQALPPGTVELAGLDRRGSQAD CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC TKAPAGETRRVVYFDAELKLLRDYDFGAWDSPGVAGLVSALGAGPRGITGITSGGNKAGD CCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCC IIRAHGTALYRRDGERWVGVLPAGYRPAEAPTVATDAQRGPAAILDAMRKVIESVQKDAS EEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC PAQRAVIEQELTTAHANIRARLARVNEGYAIAAGAEHGQYLRFAKALVDGARVRAMPLVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEE HGGEENLRLLRAGKVSVALAQGDAALEAYEGKGVFAADGPQASLRAIGSLYPEPVHVLVR CCCCCCEEEEECCCEEEEEECCCCHHEEECCCEEEECCCCHHHHHHHHCCCCCCEEEEEE DADPARSVSELRGKRIAVGERGSASRVTALRVLAAHGLTDKDFKAEEVGLGTGLVALRQK CCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHH QVDAVIQVIGVPADSIRDALGEMPLRLLPLDERVITAMVGQKAGYFRATIAPGTYPGLHT HHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCCCH PVRTIATAAILVTGPDLSDTEVAELTRLVYRHGRDFVARGSAQGAQIAVATAREGLMIPQ HHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCCCHH HLAAAKALDALATPGIPPAKPGGTPAKPVATPAASGARAQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRALFTLLIALVASAWLAGCGGGPPADGIRAGINERLAQALPPGTVELAGLDRRGSQAD CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC TKAPAGETRRVVYFDAELKLLRDYDFGAWDSPGVAGLVSALGAGPRGITGITSGGNKAGD CCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCC IIRAHGTALYRRDGERWVGVLPAGYRPAEAPTVATDAQRGPAAILDAMRKVIESVQKDAS EEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC PAQRAVIEQELTTAHANIRARLARVNEGYAIAAGAEHGQYLRFAKALVDGARVRAMPLVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEE HGGEENLRLLRAGKVSVALAQGDAALEAYEGKGVFAADGPQASLRAIGSLYPEPVHVLVR CCCCCCEEEEECCCEEEEEECCCCHHEEECCCEEEECCCCHHHHHHHHCCCCCCEEEEEE DADPARSVSELRGKRIAVGERGSASRVTALRVLAAHGLTDKDFKAEEVGLGTGLVALRQK CCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHH QVDAVIQVIGVPADSIRDALGEMPLRLLPLDERVITAMVGQKAGYFRATIAPGTYPGLHT HHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCCCH PVRTIATAAILVTGPDLSDTEVAELTRLVYRHGRDFVARGSAQGAQIAVATAREGLMIPQ HHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCCCHH HLAAAKALDALATPGIPPAKPGGTPAKPVATPAASGARAQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]