| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is livM3 [H]
Identifier: 116695946
GI number: 116695946
Start: 2267930
End: 2269141
Strand: Direct
Name: livM3 [H]
Synonym: H16_B2010
Alternate gene names: 116695946
Gene position: 2267930-2269141 (Clockwise)
Preceding gene: 116695945
Following gene: 116695947
Centisome position: 77.87
GC content: 67.0
Gene sequence:
>1212_bases GTGAACGTGTCTGACAACGTCTCGAAGCCGCTGCCGGCGGCCTCCGCCGCCACGGCCGAGGGCCCGCAGCGGCGCCCGGC CATGGTGCTGGCCATCTCGGCCATCGCCCTGGTGGCCTATCTCTACTTCTTCCTGCATGCGGAATCGCAACTGGCGGTAG CCGTGCTGCTGGCGCTGGCCGGGGCCGCGGTGTTCGCGGCGGGCCGGCTGGGCCTGACGCAGGCCGTGGAGCAGGCAGCA TCGCGGCGGCCAGGGCAGTCCAGGCTATGGACGCTGGCCGGCACGCTGGCGCTGGTCGCGCTGTTCCACGAGAGCCATTT CGTCCTGCTGATGCTGTGTGCCGTGCTGCTTTACACCACCGCCTGCCTGGGGCTGACAGTCCAGTTCGGGTTTTCCGGCG TGTCCAATTTCGCGGGCGCGGCGTTCTTTGGCATCGGCGCCTACACCACGGCCGTGCTGGCCACGCACACGGGCATTCCT CACGTGCTGGTGATCGTGCTGTCTGGCCTGGCAGCGGCCGTGATCGGCTCGGTGCTGGTTGCGCCCGTGCTGCGCACGCG CGGCCACTATGCGGCGCTGGTGACCATCGCGTTCGGCATCCTGTTCAAGACCTTCCTTGAGGTCAACGACGTGCTGGGCG GGCCGCAGGGCCTGCAGGTGCCCGGGATGACGCTGTTCGGCTTCGCGTTCAATGAGAGCGTGACACTGTTCGGCGTGGAC GTGTCGTTCTACGCCAGCTATGCGCTGCTGAGCCTGCTGATCTGTGCGGGCACGTTTGCCGTGGTCAAGGCGCTGGAGCG CTCGTGGGTAGGCCTGGCGATGGACGTGGTGCGCACCGACGAGACCGCCGCCGCCGCGTTCGGCCTGCACATCGCCCGGT GGAAGGTGATTGCGTTCATGCTCGGCAACTTCTTTGCCGGCATCGCCGGCAGTGTCTACGGCATGGTCACTGCGTTCGTG GCGCCCAACAACTTCACCTTCGCCGACTCGCTGCTGATGCTGTCGATCGTGATCCTGGGCGGCCTCGGCAACGTGGTGGG CCTGGTGCCGGCGGCCATTATCGTGCTGGTGCTGCCCGAAAAGCTGCAGTTCATCCAGGAATACCGCTTCCTGTTCTACG CGGCGCTGGTGATCGCCATCCTGCTGTTCCGCCCGGACGGCCTGATGCCGCGCAAGACCCGCCTGTTCTTTCCCCGGGAG GATGCGCAATGA
Upstream 100 bases:
>100_bases GTGCCCGACATCCCGAGCGCCTACAAGGACGTATTCGCCTTTGCCGTGGTCATCGTGCTGATGGCCTGGAAGCCGACCGG ACTCATCGCGGAGAAAGCCA
Downstream 100 bases:
>100_bases GCGACGCAATGATCCAGGTGCGCGACCTGACCATGCGCTTTGGCGGCCTGACCGCGCTGGACAACCTCCAGCTCGAGATC CGCCGTGGCGAGATCCTGGG
Product: ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNVSDNVSKPLPAASAATAEGPQRRPAMVLAISAIALVAYLYFFLHAESQLAVAVLLALAGAAVFAAGRLGLTQAVEQAA SRRPGQSRLWTLAGTLALVALFHESHFVLLMLCAVLLYTTACLGLTVQFGFSGVSNFAGAAFFGIGAYTTAVLATHTGIP HVLVIVLSGLAAAVIGSVLVAPVLRTRGHYAALVTIAFGILFKTFLEVNDVLGGPQGLQVPGMTLFGFAFNESVTLFGVD VSFYASYALLSLLICAGTFAVVKALERSWVGLAMDVVRTDETAAAAFGLHIARWKVIAFMLGNFFAGIAGSVYGMVTAFV APNNFTFADSLLMLSIVILGGLGNVVGLVPAAIIVLVLPEKLQFIQEYRFLFYAALVIAILLFRPDGLMPRKTRLFFPRE DAQ
Sequences:
>Translated_403_residues MNVSDNVSKPLPAASAATAEGPQRRPAMVLAISAIALVAYLYFFLHAESQLAVAVLLALAGAAVFAAGRLGLTQAVEQAA SRRPGQSRLWTLAGTLALVALFHESHFVLLMLCAVLLYTTACLGLTVQFGFSGVSNFAGAAFFGIGAYTTAVLATHTGIP HVLVIVLSGLAAAVIGSVLVAPVLRTRGHYAALVTIAFGILFKTFLEVNDVLGGPQGLQVPGMTLFGFAFNESVTLFGVD VSFYASYALLSLLICAGTFAVVKALERSWVGLAMDVVRTDETAAAAFGLHIARWKVIAFMLGNFFAGIAGSVYGMVTAFV APNNFTFADSLLMLSIVILGGLGNVVGLVPAAIIVLVLPEKLQFIQEYRFLFYAALVIAILLFRPDGLMPRKTRLFFPRE DAQ >Mature_403_residues MNVSDNVSKPLPAASAATAEGPQRRPAMVLAISAIALVAYLYFFLHAESQLAVAVLLALAGAAVFAAGRLGLTQAVEQAA SRRPGQSRLWTLAGTLALVALFHESHFVLLMLCAVLLYTTACLGLTVQFGFSGVSNFAGAAFFGIGAYTTAVLATHTGIP HVLVIVLSGLAAAVIGSVLVAPVLRTRGHYAALVTIAFGILFKTFLEVNDVLGGPQGLQVPGMTLFGFAFNESVTLFGVD VSFYASYALLSLLICAGTFAVVKALERSWVGLAMDVVRTDETAAAAFGLHIARWKVIAFMLGNFFAGIAGSVYGMVTAFV APNNFTFADSLLMLSIVILGGLGNVVGLVPAAIIVLVLPEKLQFIQEYRFLFYAALVIAILLFRPDGLMPRKTRLFFPRE DAQ
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=289, Percent_Identity=35.2941176470588, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 42571; Mature: 42571
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSDNVSKPLPAASAATAEGPQRRPAMVLAISAIALVAYLYFFLHAESQLAVAVLLALA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GAAVFAAGRLGLTQAVEQAASRRPGQSRLWTLAGTLALVALFHESHFVLLMLCAVLLYTT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ACLGLTVQFGFSGVSNFAGAAFFGIGAYTTAVLATHTGIPHVLVIVLSGLAAAVIGSVLV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH APVLRTRGHYAALVTIAFGILFKTFLEVNDVLGGPQGLQVPGMTLFGFAFNESVTLFGVD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEECH VSFYASYALLSLLICAGTFAVVKALERSWVGLAMDVVRTDETAAAAFGLHIARWKVIAFM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGNFFAGIAGSVYGMVTAFVAPNNFTFADSLLMLSIVILGGLGNVVGLVPAAIIVLVLPE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCH KLQFIQEYRFLFYAALVIAILLFRPDGLMPRKTRLFFPREDAQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MNVSDNVSKPLPAASAATAEGPQRRPAMVLAISAIALVAYLYFFLHAESQLAVAVLLALA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GAAVFAAGRLGLTQAVEQAASRRPGQSRLWTLAGTLALVALFHESHFVLLMLCAVLLYTT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ACLGLTVQFGFSGVSNFAGAAFFGIGAYTTAVLATHTGIPHVLVIVLSGLAAAVIGSVLV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH APVLRTRGHYAALVTIAFGILFKTFLEVNDVLGGPQGLQVPGMTLFGFAFNESVTLFGVD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEECH VSFYASYALLSLLICAGTFAVVKALERSWVGLAMDVVRTDETAAAAFGLHIARWKVIAFM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGNFFAGIAGSVYGMVTAFVAPNNFTFADSLLMLSIVILGGLGNVVGLVPAAIIVLVLPE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCH KLQFIQEYRFLFYAALVIAILLFRPDGLMPRKTRLFFPREDAQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]