Click here to switch to the map view.

The map label for this gene is fct [H]

Identifier: 116695912

GI number: 116695912

Start: 2232799

End: 2234733

Strand: Direct

Name: fct [H]

Synonym: H16_B1976

Alternate gene names: 116695912

Gene position: 2232799-2234733 (Clockwise)

Preceding gene: 116695908

Following gene: 116695914

Centisome position: 76.66

GC content: 64.81

Gene sequence:

>1935_bases
GTGACCAAGTCGGATCAATCAGCGGCCGACGCCGCGCAGTCGATCACCGTCATTACGCGTGACCTGCTCGACAGCCAGCA
GGCACAGAACCTCAGCGACGCGCTGCAGAACTCAGCCGGCGTGGTCACCAACGTCTATGGCAGGCGCGGCTGGGACGACT
TCATCATCCGCGGCCAGCGTGCATCGGAATCGATCTTTGCCGACGGATTGCTCGTCGACAGCAACAACCGCGTGGCGCAG
GAGCTGTTCGGCGTGGAACGCGTGGAAGTGCTCAAGGGACCGGCCTCGATCCTGTTCGGCGCGGTGCAGCCGGGCGGCCT
GGTCAACATGGTCAGCAAGCGCCCGCGTGCCGAACTGTTCGGTGAACTGGGCCTGACCGTCGGCAACTACGGCTTCCGGC
AGACGACGGTCGACGTCGGCACGCCGCTGGCCAAGGACAGCAAGGCCGCGTTCCGCCTGAACGCGCTGATGATGAACAGC
GACGATCCGACCGACTACGTCTGGTATCGCAACCGCTGGATCGCGCCATCGCTGACGCTCGACCTTGGCACGCGCACGGA
CTTCACGATCCTGGCCAGCCACAGCCAACGCAACTACGTGCGCCAGCAGGGCCTGCCAGTGAATGGCACCCTGGTGCCGA
ACCGCAATGGCGTGGTGCCGAGCAACCGCTTCATCGGCGAGCCGAATGCGCCGTCTTATGACGGCGAGCAGAACCGCATC
GGCTACGCGCTGACGCACCGCTTCGACTCCGGCTGGACCTTGAACCAGAACCTGCGCTACCAGACGTCGTCGCTGACCGG
CACGCTGGTGTCGGCCGGCACCATGGCCGTCAACAGCCAGGCGATGAACCGCAGTGGCACGCAGCAGAGCTTCTCGGGGG
ACTCGTTCGGTGTTGACACTAACGTGCAGCGGACTTTCGCGTTCACGGGGCATGCCCACAGCGTGACCTTTGGCATCGAC
TACCGCCATACGAAGGAAGACCGCCTGCAGAAGACGTGCCGCGTGGCAGCGCTGAACGTCTACAACCCGGTCTATGGCGC
CAGCATCAACTGCCCGTCCGCCTATAGCCTGGACGCGACCGATACGCTAAACGCGGTTGGCCTCTACCTGCGCGACCAGA
TCCGTATCGCCGAGCGCTGGACCGTGACCGGCGGCGTGCGCTACGAATCCGCGCAGACGAGCACGACGGACCGGCTGGCG
CGGTCGCGTACCGGCAACGACGACAACGCCGTCACCGGCAGCGCGGGCGTGATGTACGACCTGACGCACTGGGCACGTCC
GTACCTGAGCTTCGCCACTTCGTTCCTGCCGAACGCCGGCACCGACGTCAACGGCGCCACGTTCAAGCCCGAGAAGGGCC
GCCAGTACGAAGTGGGCATCAAGTTCGACATGCCGGACAAGACCGGCCTGCTGACCCTGGCCGCGTTCGACCTGACCCGC
ACCAATGTGCTCAGTACCGATCCGGTTAACACAGGCTTCAGCGTGGCCGTGGGCGAACAGCGTTCGCGCGGGCTGGAAAT
GGAGCTGACGCAGGATCTCGGCAATGGCCTCAGCGTTTCGGGCGCCTATGCCTATATCGCAAGCGAAGTCACCGAAGACA
CCACGGCTGCGAACGTCGGCAAGCCGCTCAACAGCGTGCCCCGGCACAGCTTCTCGGTGTGGAGCCAGTACCGCTTCCGC
GGCGCGCTGGCTGGCTGGTACGTCGGTGCCGGCGTGCGCGGCGAGAGCGCCAAGCGCGGCTACAGCTTTAACTACACCGT
GCCGGGCTACACGGTGGCCGATCTTGCCGTCGGCTACGTGGCATCGCACTGGCGCGCGGCGTTCAACGTCAAGAACGTGT
TCGACAAGATGTACTACGCGGGCGGCCTGAACAACAACGTGCTACCAGTGGGCAATCCGCGGGTGGCCATGCTCAACGTG
ACGATGAACTATTGA

Upstream 100 bases:

>100_bases
CCACGCCGCCGAAGATCTCAGCACGCTGCCATCCGTGACGGTCAGCGCCGCCGCCGACGGGCAAACTGACGTAGGCTTCA
GCACGCGGCGGCCGGCCGGA

Downstream 100 bases:

>100_bases
TGCGGCCCCCGCCTGGAGCCTCCTGACCAGTAGTCAGGCGGCCATCAAGCTGATGTGGCTGGCCTTGCGCCCGCCCCATC
GCCGCAATCACCGCCCCTAA

Product: outer membrane receptor, TonB dependent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MTKSDQSAADAAQSITVITRDLLDSQQAQNLSDALQNSAGVVTNVYGRRGWDDFIIRGQRASESIFADGLLVDSNNRVAQ
ELFGVERVEVLKGPASILFGAVQPGGLVNMVSKRPRAELFGELGLTVGNYGFRQTTVDVGTPLAKDSKAAFRLNALMMNS
DDPTDYVWYRNRWIAPSLTLDLGTRTDFTILASHSQRNYVRQQGLPVNGTLVPNRNGVVPSNRFIGEPNAPSYDGEQNRI
GYALTHRFDSGWTLNQNLRYQTSSLTGTLVSAGTMAVNSQAMNRSGTQQSFSGDSFGVDTNVQRTFAFTGHAHSVTFGID
YRHTKEDRLQKTCRVAALNVYNPVYGASINCPSAYSLDATDTLNAVGLYLRDQIRIAERWTVTGGVRYESAQTSTTDRLA
RSRTGNDDNAVTGSAGVMYDLTHWARPYLSFATSFLPNAGTDVNGATFKPEKGRQYEVGIKFDMPDKTGLLTLAAFDLTR
TNVLSTDPVNTGFSVAVGEQRSRGLEMELTQDLGNGLSVSGAYAYIASEVTEDTTAANVGKPLNSVPRHSFSVWSQYRFR
GALAGWYVGAGVRGESAKRGYSFNYTVPGYTVADLAVGYVASHWRAAFNVKNVFDKMYYAGGLNNNVLPVGNPRVAMLNV
TMNY

Sequences:

>Translated_644_residues
MTKSDQSAADAAQSITVITRDLLDSQQAQNLSDALQNSAGVVTNVYGRRGWDDFIIRGQRASESIFADGLLVDSNNRVAQ
ELFGVERVEVLKGPASILFGAVQPGGLVNMVSKRPRAELFGELGLTVGNYGFRQTTVDVGTPLAKDSKAAFRLNALMMNS
DDPTDYVWYRNRWIAPSLTLDLGTRTDFTILASHSQRNYVRQQGLPVNGTLVPNRNGVVPSNRFIGEPNAPSYDGEQNRI
GYALTHRFDSGWTLNQNLRYQTSSLTGTLVSAGTMAVNSQAMNRSGTQQSFSGDSFGVDTNVQRTFAFTGHAHSVTFGID
YRHTKEDRLQKTCRVAALNVYNPVYGASINCPSAYSLDATDTLNAVGLYLRDQIRIAERWTVTGGVRYESAQTSTTDRLA
RSRTGNDDNAVTGSAGVMYDLTHWARPYLSFATSFLPNAGTDVNGATFKPEKGRQYEVGIKFDMPDKTGLLTLAAFDLTR
TNVLSTDPVNTGFSVAVGEQRSRGLEMELTQDLGNGLSVSGAYAYIASEVTEDTTAANVGKPLNSVPRHSFSVWSQYRFR
GALAGWYVGAGVRGESAKRGYSFNYTVPGYTVADLAVGYVASHWRAAFNVKNVFDKMYYAGGLNNNVLPVGNPRVAMLNV
TMNY
>Mature_643_residues
TKSDQSAADAAQSITVITRDLLDSQQAQNLSDALQNSAGVVTNVYGRRGWDDFIIRGQRASESIFADGLLVDSNNRVAQE
LFGVERVEVLKGPASILFGAVQPGGLVNMVSKRPRAELFGELGLTVGNYGFRQTTVDVGTPLAKDSKAAFRLNALMMNSD
DPTDYVWYRNRWIAPSLTLDLGTRTDFTILASHSQRNYVRQQGLPVNGTLVPNRNGVVPSNRFIGEPNAPSYDGEQNRIG
YALTHRFDSGWTLNQNLRYQTSSLTGTLVSAGTMAVNSQAMNRSGTQQSFSGDSFGVDTNVQRTFAFTGHAHSVTFGIDY
RHTKEDRLQKTCRVAALNVYNPVYGASINCPSAYSLDATDTLNAVGLYLRDQIRIAERWTVTGGVRYESAQTSTTDRLAR
SRTGNDDNAVTGSAGVMYDLTHWARPYLSFATSFLPNAGTDVNGATFKPEKGRQYEVGIKFDMPDKTGLLTLAAFDLTRT
NVLSTDPVNTGFSVAVGEQRSRGLEMELTQDLGNGLSVSGAYAYIASEVTEDTTAANVGKPLNSVPRHSFSVWSQYRFRG
ALAGWYVGAGVRGESAKRGYSFNYTVPGYTVADLAVGYVASHWRAAFNVKNVFDKMYYAGGLNNNVLPVGNPRVAMLNVT
MNY

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=672, Percent_Identity=31.1011904761905, Blast_Score=250, Evalue=2e-67,
Organism=Escherichia coli, GI1787024, Length=711, Percent_Identity=26.3009845288326, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1787344, Length=669, Percent_Identity=23.4678624813154, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1790743, Length=376, Percent_Identity=23.936170212766, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 70205; Mature: 70074

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSDQSAADAAQSITVITRDLLDSQQAQNLSDALQNSAGVVTNVYGRRGWDDFIIRGQR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHEEECCC
ASESIFADGLLVDSNNRVAQELFGVERVEVLKGPASILFGAVQPGGLVNMVSKRPRAELF
CCCCCEECCEEEECCCHHHHHHHCCHHHHHHCCCHHHEEECCCCCCHHHHHHCCCHHHHH
GELGLTVGNYGFRQTTVDVGTPLAKDSKAAFRLNALMMNSDDPTDYVWYRNRWIAPSLTL
HHHCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCEEECCEEEE
DLGTRTDFTILASHSQRNYVRQQGLPVNGTLVPNRNGVVPSNRFIGEPNAPSYDGEQNRI
ECCCCCCEEEEECCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
GYALTHRFDSGWTLNQNLRYQTSSLTGTLVSAGTMAVNSQAMNRSGTQQSFSGDSFGVDT
EEEEEEECCCCCEECCCCEEEECCCCEEEEECCEEEECHHHHCCCCCCCCCCCCCCCCCC
NVQRTFAFTGHAHSVTFGIDYRHTKEDRLQKTCRVAALNVYNPVYGASINCPSAYSLDAT
CCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCC
DTLNAVGLYLRDQIRIAERWTVTGGVRYESAQTSTTDRLARSRTGNDDNAVTGSAGVMYD
HHHHHHHHHHHCEEEEEEEEEEECCEEECCCCCCHHHHHHHHCCCCCCCCEECCCCEEEE
LTHWARPYLSFATSFLPNAGTDVNGATFKPEKGRQYEVGIKFDMPDKTGLLTLAAFDLTR
HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEEEECHH
TNVLSTDPVNTGFSVAVGEQRSRGLEMELTQDLGNGLSVSGAYAYIASEVTEDTTAANVG
CCEEECCCCCCCEEEEECCHHHCCCCEEEHHHHCCCCCCCCHHEEHHHHHCCCHHHHHCC
KPLNSVPRHSFSVWSQYRFRGALAGWYVGAGVRGESAKRGYSFNYTVPGYTVADLAVGYV
CCHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
ASHWRAAFNVKNVFDKMYYAGGLNNNVLPVGNPRVAMLNVTMNY
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECC
>Mature Secondary Structure 
TKSDQSAADAAQSITVITRDLLDSQQAQNLSDALQNSAGVVTNVYGRRGWDDFIIRGQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHEEECCC
ASESIFADGLLVDSNNRVAQELFGVERVEVLKGPASILFGAVQPGGLVNMVSKRPRAELF
CCCCCEECCEEEECCCHHHHHHHCCHHHHHHCCCHHHEEECCCCCCHHHHHHCCCHHHHH
GELGLTVGNYGFRQTTVDVGTPLAKDSKAAFRLNALMMNSDDPTDYVWYRNRWIAPSLTL
HHHCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCEEECCEEEE
DLGTRTDFTILASHSQRNYVRQQGLPVNGTLVPNRNGVVPSNRFIGEPNAPSYDGEQNRI
ECCCCCCEEEEECCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
GYALTHRFDSGWTLNQNLRYQTSSLTGTLVSAGTMAVNSQAMNRSGTQQSFSGDSFGVDT
EEEEEEECCCCCEECCCCEEEECCCCEEEEECCEEEECHHHHCCCCCCCCCCCCCCCCCC
NVQRTFAFTGHAHSVTFGIDYRHTKEDRLQKTCRVAALNVYNPVYGASINCPSAYSLDAT
CCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCC
DTLNAVGLYLRDQIRIAERWTVTGGVRYESAQTSTTDRLARSRTGNDDNAVTGSAGVMYD
HHHHHHHHHHHCEEEEEEEEEEECCEEECCCCCCHHHHHHHHCCCCCCCCEECCCCEEEE
LTHWARPYLSFATSFLPNAGTDVNGATFKPEKGRQYEVGIKFDMPDKTGLLTLAAFDLTR
HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEEEECHH
TNVLSTDPVNTGFSVAVGEQRSRGLEMELTQDLGNGLSVSGAYAYIASEVTEDTTAANVG
CCEEECCCCCCCEEEEECCHHHCCCCEEEHHHHCCCCCCCCHHEEHHHHHCCCHHHHHCC
KPLNSVPRHSFSVWSQYRFRGALAGWYVGAGVRGESAKRGYSFNYTVPGYTVADLAVGYV
CCHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
ASHWRAAFNVKNVFDKMYYAGGLNNNVLPVGNPRVAMLNVTMNY
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]