Click here to switch to the map view.

The map label for this gene is yebQ [H]

Identifier: 116695908

GI number: 116695908

Start: 2228129

End: 2229532

Strand: Direct

Name: yebQ [H]

Synonym: H16_B1972

Alternate gene names: 116695908

Gene position: 2228129-2229532 (Clockwise)

Preceding gene: 116695907

Following gene: 116695912

Centisome position: 76.5

GC content: 70.51

Gene sequence:

>1404_bases
ATGTCTCTCCCCATGCAGCCAGAACAAGGCCTTCCCCAGCCACAGCGGACCTGGGCGATCCTCACTGTTTTCTTCGGCCT
GATCATGGCCGTGCTCGATGGTTCGATCGCCAACATCGCCTTGCCCTCGATCTCACGCGAGCTGCAGGCCGATCCGTCCA
GCACGATCTGGGTGGTCAACGCTTATCAGCTGACGGTGACCGTGTGCCTGCTGCCGCTCTCGTCGCTGGGGGACATCCTT
GGCTACAAGCGCGTGTACCGGGCGGGGCTGGCCACCTTCCTGCTGGGCTCGCTGCTGTGCGCGCTGGCGGTCAACCTGCC
GATGCTGGTGGCCGCGCGCGTGCTGCAGGGCATCGGCGGCGCCGGCATCATGAGCGTCAACACGGCGCTGGTGCGCTTTA
TCTACCCGCCCACGCGCCTGGGCCGCGGCATCGGGCTGAACGCGCTGGTGGTCGGCGTGACCATCGCCGTGGGCCCGTCG
CTGGGCGCGCTGATCCTGGCGGTCGCCAGCTGGAAATGGCTGTTCGCGGTCAACGTGCCGGTGGCCATCGTCGCGCTGGT
GCTGAGCCGCACTTCGCTGCCCGCGACGCCGCCGCAGCCGCGCGAGTTCGACTACCACAGCGCGCTGCTGTCGGCGCTGG
TGTTCGGCATGTTCATCCTCGGCGTCGACGGCCTGGGCCACGCCCGCTGGCGCATCGCAGGCGCCGCGGGCATGGCCGCC
GCTGTGATGCTGGGTTGGCTGCTGGTGCGGCGCCAGCACGGGCGCCCCGCGCCGCTGGTGCCGGTGGACCTGTTTTCCAG
CCGCTCCTTCACGCTGGCGGTGGGCACCTCGTTCTGCTCTTTCATGACGCAGATGCTGGCCTTTATCGCGCTGCCGTTCT
ATCTCGAATACCAGCTCGGCCGCTCCCTGCAGGAAACCGGCCTGCTGATCACGCCCTGGCCGCTGATGGTGGCGGTGATG
GCCACGGTGTCGGGCCGGCTGTCGGACCGCTATCCGGCCAGCATCCTCGCCGGCATCGGCCTGGCCATGCTGGCGGGCGG
GCTGGTCGGGCTGGCCACGCTGGGCCCGGACGCCGGCAGCCTGGATATCGTCTGGCGCATGGCGATGTGCGGCACGGGCT
TCGGCTTCTTCCAGTCCCCCAACAACCGCGCCATGATCGGCGCCACGCCGCCCGAGCGCAGCGGCGGCGCCAGCGGCGCG
CAGGCGACCACGCGGCTGCTGGGGCAGACCAGCGGCACAGCGGTGGTGGCGCTGCTGTTCAGCCTGACGCCGACCGGCGC
GGCGCGCATTGCGCTGTATCTGGCGGCGGTGGTGGCGGCGCTGGGGGCCTTGATCAGCCTGAGCAGGTTGCGCGATGCCA
GCGGCGCGGAACCTGCGCGGGGGGCGGTGGAGCCGGACGCCTGA

Upstream 100 bases:

>100_bases
TAGCGGATTTGCGAGCATCGCCACGCGGGACGATAATGGCAACGCTGCGCCATGGCCGTCCTGGCCATGCCTGAGCAATG
CTGGCGCGGCATTGTCTTCA

Downstream 100 bases:

>100_bases
TCAGTGATTGCGTGCTCCCCTCTCCCGCAAGCGGGAGAGGGGAGCAAACCCTCTGGGTTTAAAGGCCTACTCCGCCTTCG
CCCCCGATTCCTTCACCACC

Product: major facilitator superfamily transporter DHA2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSLPMQPEQGLPQPQRTWAILTVFFGLIMAVLDGSIANIALPSISRELQADPSSTIWVVNAYQLTVTVCLLPLSSLGDIL
GYKRVYRAGLATFLLGSLLCALAVNLPMLVAARVLQGIGGAGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTIAVGPS
LGALILAVASWKWLFAVNVPVAIVALVLSRTSLPATPPQPREFDYHSALLSALVFGMFILGVDGLGHARWRIAGAAGMAA
AVMLGWLLVRRQHGRPAPLVPVDLFSSRSFTLAVGTSFCSFMTQMLAFIALPFYLEYQLGRSLQETGLLITPWPLMVAVM
ATVSGRLSDRYPASILAGIGLAMLAGGLVGLATLGPDAGSLDIVWRMAMCGTGFGFFQSPNNRAMIGATPPERSGGASGA
QATTRLLGQTSGTAVVALLFSLTPTGAARIALYLAAVVAALGALISLSRLRDASGAEPARGAVEPDA

Sequences:

>Translated_467_residues
MSLPMQPEQGLPQPQRTWAILTVFFGLIMAVLDGSIANIALPSISRELQADPSSTIWVVNAYQLTVTVCLLPLSSLGDIL
GYKRVYRAGLATFLLGSLLCALAVNLPMLVAARVLQGIGGAGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTIAVGPS
LGALILAVASWKWLFAVNVPVAIVALVLSRTSLPATPPQPREFDYHSALLSALVFGMFILGVDGLGHARWRIAGAAGMAA
AVMLGWLLVRRQHGRPAPLVPVDLFSSRSFTLAVGTSFCSFMTQMLAFIALPFYLEYQLGRSLQETGLLITPWPLMVAVM
ATVSGRLSDRYPASILAGIGLAMLAGGLVGLATLGPDAGSLDIVWRMAMCGTGFGFFQSPNNRAMIGATPPERSGGASGA
QATTRLLGQTSGTAVVALLFSLTPTGAARIALYLAAVVAALGALISLSRLRDASGAEPARGAVEPDA
>Mature_466_residues
SLPMQPEQGLPQPQRTWAILTVFFGLIMAVLDGSIANIALPSISRELQADPSSTIWVVNAYQLTVTVCLLPLSSLGDILG
YKRVYRAGLATFLLGSLLCALAVNLPMLVAARVLQGIGGAGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTIAVGPSL
GALILAVASWKWLFAVNVPVAIVALVLSRTSLPATPPQPREFDYHSALLSALVFGMFILGVDGLGHARWRIAGAAGMAAA
VMLGWLLVRRQHGRPAPLVPVDLFSSRSFTLAVGTSFCSFMTQMLAFIALPFYLEYQLGRSLQETGLLITPWPLMVAVMA
TVSGRLSDRYPASILAGIGLAMLAGGLVGLATLGPDAGSLDIVWRMAMCGTGFGFFQSPNNRAMIGATPPERSGGASGAQ
ATTRLLGQTSGTAVVALLFSLTPTGAARIALYLAAVVAALGALISLSRLRDASGAEPARGAVEPDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=422, Percent_Identity=51.1848341232227, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1790195, Length=272, Percent_Identity=35.6617647058824, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1788392, Length=325, Percent_Identity=32.9230769230769, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789042, Length=427, Percent_Identity=23.6533957845433, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788710, Length=402, Percent_Identity=24.6268656716418, Blast_Score=96, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6325455, Length=190, Percent_Identity=31.0526315789474, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323735, Length=340, Percent_Identity=24.7058823529412, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321663, Length=127, Percent_Identity=31.496062992126, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48691; Mature: 48560

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPMQPEQGLPQPQRTWAILTVFFGLIMAVLDGSIANIALPSISRELQADPSSTIWVVN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHHCCCCCCEEEEEE
AYQLTVTVCLLPLSSLGDILGYKRVYRAGLATFLLGSLLCALAVNLPMLVAARVLQGIGG
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
AGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTIAVGPSLGALILAVASWKWLFAVNVP
CCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECHH
VAIVALVLSRTSLPATPPQPREFDYHSALLSALVFGMFILGVDGLGHARWRIAGAAGMAA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHH
AVMLGWLLVRRQHGRPAPLVPVDLFSSRSFTLAVGTSFCSFMTQMLAFIALPFYLEYQLG
HHHHHHHHHHHCCCCCCCEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
RSLQETGLLITPWPLMVAVMATVSGRLSDRYPASILAGIGLAMLAGGLVGLATLGPDAGS
CCHHHCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LDIVWRMAMCGTGFGFFQSPNNRAMIGATPPERSGGASGAQATTRLLGQTSGTAVVALLF
HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
SLTPTGAARIALYLAAVVAALGALISLSRLRDASGAEPARGAVEPDA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLPMQPEQGLPQPQRTWAILTVFFGLIMAVLDGSIANIALPSISRELQADPSSTIWVVN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHHCCCCCCEEEEEE
AYQLTVTVCLLPLSSLGDILGYKRVYRAGLATFLLGSLLCALAVNLPMLVAARVLQGIGG
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
AGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTIAVGPSLGALILAVASWKWLFAVNVP
CCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECHH
VAIVALVLSRTSLPATPPQPREFDYHSALLSALVFGMFILGVDGLGHARWRIAGAAGMAA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHH
AVMLGWLLVRRQHGRPAPLVPVDLFSSRSFTLAVGTSFCSFMTQMLAFIALPFYLEYQLG
HHHHHHHHHHHCCCCCCCEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
RSLQETGLLITPWPLMVAVMATVSGRLSDRYPASILAGIGLAMLAGGLVGLATLGPDAGS
CCHHHCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LDIVWRMAMCGTGFGFFQSPNNRAMIGATPPERSGGASGAQATTRLLGQTSGTAVVALLF
HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
SLTPTGAARIALYLAAVVAALGALISLSRLRDASGAEPARGAVEPDA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]