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The map label for this gene is rcsB [H]

Identifier: 116695906

GI number: 116695906

Start: 2223937

End: 2224584

Strand: Direct

Name: rcsB [H]

Synonym: H16_B1970

Alternate gene names: 116695906

Gene position: 2223937-2224584 (Clockwise)

Preceding gene: 116695904

Following gene: 116695907

Centisome position: 76.36

GC content: 66.51

Gene sequence:

>648_bases
ATGTACGACGGAGTCTTGCGTGTCGCCCTGGCGGACGACCACCCGCTGGTCGTGGCCGCCCTGCGCGACTGCCTGCAGCG
CAGCGGCAGTGCCCAGATCAGCTGCGAATGCCGCAACGGCACGGAGTTGCTCGGCGCGCTGGACCAACATCACGCCGATA
TCGCCATCACCGATTTCTGCATGGGCCACGGCGATACCTCGCTGGACGGCTTCAACCTGCTGGGCCGCCTGGCGCGTCGC
CATCCGCTGACGCGCGTGGTGGTGATCAGCGCCCAGACCAATCCCGCCATCATCCGCCGCGCCATGAAGCTTGGCGTGCG
CGCCTTCGTCAGCAAGGAAGACCACCTGGAGGAGGTCGTGCGCGCCTGCATCCACGTCGCATCCGGCGGCAGCTGCTTCT
ATTCGCCCGCGGTGCACGCCATCCTGCAACACGCCACGCTGGCCGGCGCACCGGCCACCGAACTGACGCAGCGCGAACTG
GAAGTGATCCGGCTCTATGTGCAGGGCCTGCAGTTGACCGACATCGCCGGCAAGCTCGGCCGCTCGGTCAGCACCATCTC
CAGCCAGAAGACCGTGGCCATGCGCAAGCTGGGGGTGCAGACCAATACCGGCCTGATCCGCTACGCCTATGAAAACCGCC
TGATCTGA

Upstream 100 bases:

>100_bases
TTCAAGGAGGTGCGGAACATAGCCAGAATCTCGGATTTGTGGTGGCGCAATCGCCCAGTGCAACCGGCGTGGACCGGTTG
CCGCCCATCCGGAGATAGCT

Downstream 100 bases:

>100_bases
CACGGCCGGAACCCGCCGATGCAGCAAACCGTCGACCGTGCCCGTGAAACCCTGGCCAGCGCCTTCGATGCGCTTGCCGA
CAATGCGAGGCGCCAGCAAC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MYDGVLRVALADDHPLVVAALRDCLQRSGSAQISCECRNGTELLGALDQHHADIAITDFCMGHGDTSLDGFNLLGRLARR
HPLTRVVVISAQTNPAIIRRAMKLGVRAFVSKEDHLEEVVRACIHVASGGSCFYSPAVHAILQHATLAGAPATELTQREL
EVIRLYVQGLQLTDIAGKLGRSVSTISSQKTVAMRKLGVQTNTGLIRYAYENRLI

Sequences:

>Translated_215_residues
MYDGVLRVALADDHPLVVAALRDCLQRSGSAQISCECRNGTELLGALDQHHADIAITDFCMGHGDTSLDGFNLLGRLARR
HPLTRVVVISAQTNPAIIRRAMKLGVRAFVSKEDHLEEVVRACIHVASGGSCFYSPAVHAILQHATLAGAPATELTQREL
EVIRLYVQGLQLTDIAGKLGRSVSTISSQKTVAMRKLGVQTNTGLIRYAYENRLI
>Mature_215_residues
MYDGVLRVALADDHPLVVAALRDCLQRSGSAQISCECRNGTELLGALDQHHADIAITDFCMGHGDTSLDGFNLLGRLARR
HPLTRVVVISAQTNPAIIRRAMKLGVRAFVSKEDHLEEVVRACIHVASGGSCFYSPAVHAILQHATLAGAPATELTQREL
EVIRLYVQGLQLTDIAGKLGRSVSTISSQKTVAMRKLGVQTNTGLIRYAYENRLI

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=203, Percent_Identity=33.0049261083744, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1790102, Length=208, Percent_Identity=28.8461538461538, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788712, Length=209, Percent_Identity=24.8803827751196, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786747, Length=209, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788521, Length=200, Percent_Identity=26.5, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23338; Mature: 23338

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDGVLRVALADDHPLVVAALRDCLQRSGSAQISCECRNGTELLGALDQHHADIAITDFC
CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEHHH
MGHGDTSLDGFNLLGRLARRHPLTRVVVISAQTNPAIIRRAMKLGVRAFVSKEDHLEEVV
HCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
RACIHVASGGSCFYSPAVHAILQHATLAGAPATELTQRELEVIRLYVQGLQLTDIAGKLG
HHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
RSVSTISSQKTVAMRKLGVQTNTGLIRYAYENRLI
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MYDGVLRVALADDHPLVVAALRDCLQRSGSAQISCECRNGTELLGALDQHHADIAITDFC
CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEHHH
MGHGDTSLDGFNLLGRLARRHPLTRVVVISAQTNPAIIRRAMKLGVRAFVSKEDHLEEVV
HCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
RACIHVASGGSCFYSPAVHAILQHATLAGAPATELTQRELEVIRLYVQGLQLTDIAGKLG
HHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
RSVSTISSQKTVAMRKLGVQTNTGLIRYAYENRLI
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]