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The map label for this gene is ycgF [C]

Identifier: 116695904

GI number: 116695904

Start: 2222415

End: 2222858

Strand: Direct

Name: ycgF [C]

Synonym: H16_B1968

Alternate gene names: 116695904

Gene position: 2222415-2222858 (Clockwise)

Preceding gene: 116695903

Following gene: 116695906

Centisome position: 76.31

GC content: 68.47

Gene sequence:

>444_bases
ATGCTAGTCCGCCTGCTCTATGCCAGCCGTGCCCGCCAGGCCATCGACGCCGCCCTGCTCGACGCCATCCTGGCCACCAG
CCTGGAACGCAATCCGCGCCACGGCATCACCGGGGTGCTGTGCCACGGCAACGGCATCTTCCTGCAGGCGCTGGAAGGCG
ACCGCCAGGACGTATCACAGCTGTTCCAGGCGATCGCACGCGACCCGCGCCACCACGACGTGACCCTGCTGCATTTCGAG
GAAACCTGCACGCGCGACTTTGCCGGCTGGGCGATGGGCCAGGTCAATGCGGCGCGCATCAACACCGCCACCCTGCTCAA
GTTCTCGGCGCGCGCCGAACTGGATCCGTACCGCACCTGCGGTGCGGCGTCGCTGGCCTTGCTCAAGGAGCTGATCGCCG
GCGCGTCAGTGGTGTCGCGCACCGGCGAACGCGGACGGCACTGA

Upstream 100 bases:

>100_bases
GGACGACAGCCTGCGCCGCGAGTTCCTCACGCTGCTGAACCACAACCGCGGCTAGGCCGCACGCCCCGCCCACCAGCCGC
CACAACCGAGCGCCACGCCC

Downstream 100 bases:

>100_bases
GCCTCGCCGTCAGGCCGTCACCTGGCCGAACAGGCCGCACTCCAGGTCGCTCTCGAATTCCTCGACCCAGACCGAACCGG
GGCCTGCCTCGTAGACACTG

Product: hypothetical protein

Products: NA

Alternate protein names: BLUF Domain Protein; Sensors Of Blue-Light Using FAD; Blue-Light Sensor BluF Domain; Sensors Of Blue-Light Using FAD Family; Bluf Domain Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLVRLLYASRARQAIDAALLDAILATSLERNPRHGITGVLCHGNGIFLQALEGDRQDVSQLFQAIARDPRHHDVTLLHFE
ETCTRDFAGWAMGQVNAARINTATLLKFSARAELDPYRTCGAASLALLKELIAGASVVSRTGERGRH

Sequences:

>Translated_147_residues
MLVRLLYASRARQAIDAALLDAILATSLERNPRHGITGVLCHGNGIFLQALEGDRQDVSQLFQAIARDPRHHDVTLLHFE
ETCTRDFAGWAMGQVNAARINTATLLKFSARAELDPYRTCGAASLALLKELIAGASVVSRTGERGRH
>Mature_147_residues
MLVRLLYASRARQAIDAALLDAILATSLERNPRHGITGVLCHGNGIFLQALEGDRQDVSQLFQAIARDPRHHDVTLLHFE
ETCTRDFAGWAMGQVNAARINTATLLKFSARAELDPYRTCGAASLALLKELIAGASVVSRTGERGRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16062; Mature: 16062

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRLLYASRARQAIDAALLDAILATSLERNPRHGITGVLCHGNGIFLQALEGDRQDVSQ
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCHHHHHH
LFQAIARDPRHHDVTLLHFEETCTRDFAGWAMGQVNAARINTATLLKFSARAELDPYRTC
HHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHCCHHHHEEECCCCCCCCHHHH
GAASLALLKELIAGASVVSRTGERGRH
HHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLVRLLYASRARQAIDAALLDAILATSLERNPRHGITGVLCHGNGIFLQALEGDRQDVSQ
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCHHHHHH
LFQAIARDPRHHDVTLLHFEETCTRDFAGWAMGQVNAARINTATLLKFSARAELDPYRTC
HHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHCCHHHHEEECCCCCCCCHHHH
GAASLALLKELIAGASVVSRTGERGRH
HHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA