| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695842
Identifier: 116695842
GI number: 116695842
Start: 2152593
End: 2153576
Strand: Direct
Name: 116695842
Synonym: H16_B1906
Alternate gene names: NA
Gene position: 2152593-2153576 (Clockwise)
Preceding gene: 116695841
Following gene: 116695843
Centisome position: 73.91
GC content: 66.16
Gene sequence:
>984_bases ATGACCCGCATTACCCGATTCGCACGCGTGGCGCTGGCCGGCATGCTGGCAGCCACGGCGCTGGGCGCCGCGGCGCAGGC GCCCTTCCCAAGGCAAAAACCGATTACGCTGGTGGTGCCGTTCGCCCCCGGCGGCGGCAACGATATCCTCGCGCGGCTGA TCGCGCCGAAGATGGGCAAGCTGCTGGGCCAGACCGTCGTGATCGAGAACAAGCCCGGCGCGGGCGGCAATCTCGGCGCC GACTATGTCGCCCACGCGGCTCCGGACGGCTATACGCTGGTGATCGCATCCAGCCAGGTGACGATGAACCCGTTTCTCGG CACGAAGATTCCGTTCAGCATCGAACGCGACTTCGAGCCGGTGGGGCGGATCGCGTCAGTGCCGATCATGCTGGTCGCCA ACCCCGACCAGCCGTTCCGCACGCTGCAGGATTTTATCCAGTACACCCGCGCCAATCCCGGCAAGCTCAGCTATAGCAGC CCGGGCAACGGCACGCCCCAGCACCTGGCCGGTGAAGTCTTTGCCAGGCTCAACAAGACCGAACTGCTGCACGTGCCCTA TCGCGGCACCGGGCCGTCGATCACCGACCTGATGGGCGGGCAAGTGCAGATCTCGTTCGCGACCTTTGCTTCGGCGATCC AGTATGTGCGCGCCGGCAAACTGCGCGCGCTGGGCATCGCCGGCAAGAAGCGCACCGCGCTCATGCCCGACCTGCCGACC TTTGCGGAAGCAGGCATCGCCGGCTACGACGCCGAGCTGTGGTACAGCCTGCTGGCGCCGGCGCAGACGCCGAAGCCAGT GGTCGACAAGCTCAACGCCGCACTGGTGGCCGCGCTGAAATCGCCCGACATCGCCGAGCAGATGGCAAAGCAAGGCTTCG AGCCGCAGGCGTCGTCGCCGGCCGAGCTGAAGACCTATATCGGCAAGGAAATGGCGCGCTGGCAGCGGCTGATCCAGGAC AACGGCATCAAGGTGGCCTTATGA
Upstream 100 bases:
>100_bases CCGCGGACCGCACCGAAGGCCGGCAGGCCTTCGCCGAGAAGCGCGAGCCCCGCTACACCGGGCGCTAAGCGTTCGCAAAC AGAAAGACAGGAGACAGACC
Downstream 100 bases:
>100_bases ACATGCATCCCGCCACGGTGCCGTCAACCGACAACCCGCTGCTGGACTACCTCGGCATCCGCCTGGCCAGCGTCGGCGAC GGCCGCTGCACCTTCGAGCT
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTRITRFARVALAGMLAATALGAAAQAPFPRQKPITLVVPFAPGGGNDILARLIAPKMGKLLGQTVVIENKPGAGGNLGA DYVAHAAPDGYTLVIASSQVTMNPFLGTKIPFSIERDFEPVGRIASVPIMLVANPDQPFRTLQDFIQYTRANPGKLSYSS PGNGTPQHLAGEVFARLNKTELLHVPYRGTGPSITDLMGGQVQISFATFASAIQYVRAGKLRALGIAGKKRTALMPDLPT FAEAGIAGYDAELWYSLLAPAQTPKPVVDKLNAALVAALKSPDIAEQMAKQGFEPQASSPAELKTYIGKEMARWQRLIQD NGIKVAL
Sequences:
>Translated_327_residues MTRITRFARVALAGMLAATALGAAAQAPFPRQKPITLVVPFAPGGGNDILARLIAPKMGKLLGQTVVIENKPGAGGNLGA DYVAHAAPDGYTLVIASSQVTMNPFLGTKIPFSIERDFEPVGRIASVPIMLVANPDQPFRTLQDFIQYTRANPGKLSYSS PGNGTPQHLAGEVFARLNKTELLHVPYRGTGPSITDLMGGQVQISFATFASAIQYVRAGKLRALGIAGKKRTALMPDLPT FAEAGIAGYDAELWYSLLAPAQTPKPVVDKLNAALVAALKSPDIAEQMAKQGFEPQASSPAELKTYIGKEMARWQRLIQD NGIKVAL >Mature_326_residues TRITRFARVALAGMLAATALGAAAQAPFPRQKPITLVVPFAPGGGNDILARLIAPKMGKLLGQTVVIENKPGAGGNLGAD YVAHAAPDGYTLVIASSQVTMNPFLGTKIPFSIERDFEPVGRIASVPIMLVANPDQPFRTLQDFIQYTRANPGKLSYSSP GNGTPQHLAGEVFARLNKTELLHVPYRGTGPSITDLMGGQVQISFATFASAIQYVRAGKLRALGIAGKKRTALMPDLPTF AEAGIAGYDAELWYSLLAPAQTPKPVVDKLNAALVAALKSPDIAEQMAKQGFEPQASSPAELKTYIGKEMARWQRLIQDN GIKVAL
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34746; Mature: 34615
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRITRFARVALAGMLAATALGAAAQAPFPRQKPITLVVPFAPGGGNDILARLIAPKMGK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH LLGQTVVIENKPGAGGNLGADYVAHAAPDGYTLVIASSQVTMNPFLGTKIPFSIERDFEP HHCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEECCCCCH VGRIASVPIMLVANPDQPFRTLQDFIQYTRANPGKLSYSSPGNGTPQHLAGEVFARLNKT HHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCCC ELLHVPYRGTGPSITDLMGGQVQISFATFASAIQYVRAGKLRALGIAGKKRTALMPDLPT EEEECCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCH FAEAGIAGYDAELWYSLLAPAQTPKPVVDKLNAALVAALKSPDIAEQMAKQGFEPQASSP HHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH AELKTYIGKEMARWQRLIQDNGIKVAL HHHHHHHHHHHHHHHHHHHCCCCEEEC >Mature Secondary Structure TRITRFARVALAGMLAATALGAAAQAPFPRQKPITLVVPFAPGGGNDILARLIAPKMGK CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH LLGQTVVIENKPGAGGNLGADYVAHAAPDGYTLVIASSQVTMNPFLGTKIPFSIERDFEP HHCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEECCCCCH VGRIASVPIMLVANPDQPFRTLQDFIQYTRANPGKLSYSSPGNGTPQHLAGEVFARLNKT HHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCCC ELLHVPYRGTGPSITDLMGGQVQISFATFASAIQYVRAGKLRALGIAGKKRTALMPDLPT EEEECCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCH FAEAGIAGYDAELWYSLLAPAQTPKPVVDKLNAALVAALKSPDIAEQMAKQGFEPQASSP HHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH AELKTYIGKEMARWQRLIQDNGIKVAL HHHHHHHHHHHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]