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The map label for this gene is xdhA2 [H]

Identifier: 116695833

GI number: 116695833

Start: 2143876

End: 2144853

Strand: Direct

Name: xdhA2 [H]

Synonym: H16_B1897

Alternate gene names: 116695833

Gene position: 2143876-2144853 (Clockwise)

Preceding gene: 116695832

Following gene: 116695834

Centisome position: 73.61

GC content: 68.2

Gene sequence:

>978_bases
ATGATCCCGTTCACACTGCAGAAAGCCGGCTCGGAAGCTGAAGCGCTGGCGGCGGCCGCGGCCGGGGCCCGCTTCATCGC
CGGCGGCACCACGCTGGCGGACCTGATGCGCGAGCACGTGGAACAGCCCACGCAACTGGTAGACATCAACGCGCTGCCGC
TGAACCATATCCGCATGGAGGGCGACGAGCTGGTCATCGGCGCGCTGGCCCGCATGTCCGATGTCGCCGCGCATCCCGAC
GTTTGCCGGCTCCACCCGGTGATCGCCGAGTCGCTGGTCGAGGGCGCCTCTCCCCAGTTGCGAAACATGGCCAGCATCGG
CGGCAACCTGCTCCAGCGCGTGCGCTGTCCTTACTTCCGCATGCTCGATGCCGCCTGCAACAAGCGCACCCCGGACAGCG
GCTGCGCGGCCATCGACGGGTTGCACGCGGGCAATGCCATCCTGGGCGCCAGCGACCATTGCTCCGCAACGCATCCGTCC
GACCTTGCGGTTGCCCTGGTCGCGCTGGACGCGGTGGTCCACGTACGGGGTCCGCACGGCGCGCGCCATTTCCGCGTGGA
AGACCTTTACCGCCTGCCCGGAACCACGCCGCATCTCGAACACACCTTGCAGGCCGGCGAACTCATTGCCGAGGTGCGAG
TTCCACCGCTCGCCTATGCACGGACTGCGCGCTATCTGAAAGTGCGGGACCGGGCCTCGTATGAGTTTGCCCTGGTATCT
GCCGCGGCAGCCTTCGAGGTCAGGGATGGCGTGATCCAGGCCGCTCGCCTCGCATGCGGTGGCGTGGGCACCCGGCCATG
GCGCATGCGCGCGGCCGAACTCGCGCTGCAAGGCAGGCCGCCCACGCGCGCGAGCTTCGAGGCGGCAGCGCTTACCACGA
TTGCAGGCGCCACCCCGCTGCCAGGTAACCACTACAAGGTCGCGCTGCTGCAACGAACGGTGGTACGGGCCCTCGAACTC
GCAGGAGAAGGCAGATGA

Upstream 100 bases:

>100_bases
CCGACGATGTGCGCTTCTGGATGAGCGGCAATATCTGCCGTTGCGGGGCTTACCCGGGGGTCGTCGCGGCGATCGCCGAG
GTCGGCGGGAGGATGCTGCC

Downstream 100 bases:

>100_bases
ACGCAAACCATATCGGCCAGCCGCATGCCCGCGTCGACGGGCGCGCCAAGGTGACCGGCAGCGCGCGGTATGCCGCCGAC
TTCAACCAGCCAGGACAGGC

Product: putative xanthine dehydrogenase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIPFTLQKAGSEAEALAAAAAGARFIAGGTTLADLMREHVEQPTQLVDINALPLNHIRMEGDELVIGALARMSDVAAHPD
VCRLHPVIAESLVEGASPQLRNMASIGGNLLQRVRCPYFRMLDAACNKRTPDSGCAAIDGLHAGNAILGASDHCSATHPS
DLAVALVALDAVVHVRGPHGARHFRVEDLYRLPGTTPHLEHTLQAGELIAEVRVPPLAYARTARYLKVRDRASYEFALVS
AAAAFEVRDGVIQAARLACGGVGTRPWRMRAAELALQGRPPTRASFEAAALTTIAGATPLPGNHYKVALLQRTVVRALEL
AGEGR

Sequences:

>Translated_325_residues
MIPFTLQKAGSEAEALAAAAAGARFIAGGTTLADLMREHVEQPTQLVDINALPLNHIRMEGDELVIGALARMSDVAAHPD
VCRLHPVIAESLVEGASPQLRNMASIGGNLLQRVRCPYFRMLDAACNKRTPDSGCAAIDGLHAGNAILGASDHCSATHPS
DLAVALVALDAVVHVRGPHGARHFRVEDLYRLPGTTPHLEHTLQAGELIAEVRVPPLAYARTARYLKVRDRASYEFALVS
AAAAFEVRDGVIQAARLACGGVGTRPWRMRAAELALQGRPPTRASFEAAALTTIAGATPLPGNHYKVALLQRTVVRALEL
AGEGR
>Mature_325_residues
MIPFTLQKAGSEAEALAAAAAGARFIAGGTTLADLMREHVEQPTQLVDINALPLNHIRMEGDELVIGALARMSDVAAHPD
VCRLHPVIAESLVEGASPQLRNMASIGGNLLQRVRCPYFRMLDAACNKRTPDSGCAAIDGLHAGNAILGASDHCSATHPS
DLAVALVALDAVVHVRGPHGARHFRVEDLYRLPGTTPHLEHTLQAGELIAEVRVPPLAYARTARYLKVRDRASYEFALVS
AAAAFEVRDGVIQAARLACGGVGTRPWRMRAAELALQGRPPTRASFEAAALTTIAGATPLPGNHYKVALLQRTVVRALEL
AGEGR

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=323, Percent_Identity=46.749226006192, Blast_Score=248, Evalue=4e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 34501; Mature: 34501

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFTLQKAGSEAEALAAAAAGARFIAGGTTLADLMREHVEQPTQLVDINALPLNHIRME
CCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHEEEC
GDELVIGALARMSDVAAHPDVCRLHPVIAESLVEGASPQLRNMASIGGNLLQRVRCPYFR
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH
MLDAACNKRTPDSGCAAIDGLHAGNAILGASDHCSATHPSDLAVALVALDAVVHVRGPHG
HHHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEECCCCC
ARHFRVEDLYRLPGTTPHLEHTLQAGELIAEVRVPPLAYARTARYLKVRDRASYEFALVS
CCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCEEEHHHH
AAAAFEVRDGVIQAARLACGGVGTRPWRMRAAELALQGRPPTRASFEAAALTTIAGATPL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
PGNHYKVALLQRTVVRALELAGEGR
CCCCEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIPFTLQKAGSEAEALAAAAAGARFIAGGTTLADLMREHVEQPTQLVDINALPLNHIRME
CCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHEEEC
GDELVIGALARMSDVAAHPDVCRLHPVIAESLVEGASPQLRNMASIGGNLLQRVRCPYFR
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH
MLDAACNKRTPDSGCAAIDGLHAGNAILGASDHCSATHPSDLAVALVALDAVVHVRGPHG
HHHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEECCCCC
ARHFRVEDLYRLPGTTPHLEHTLQAGELIAEVRVPPLAYARTARYLKVRDRASYEFALVS
CCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCEEEHHHH
AAAAFEVRDGVIQAARLACGGVGTRPWRMRAAELALQGRPPTRASFEAAALTTIAGATPL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
PGNHYKVALLQRTVVRALELAGEGR
CCCCEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]