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The map label for this gene is dadA7 [H]

Identifier: 116695829

GI number: 116695829

Start: 2139592

End: 2141037

Strand: Direct

Name: dadA7 [H]

Synonym: H16_B1893

Alternate gene names: 116695829

Gene position: 2139592-2141037 (Clockwise)

Preceding gene: 116695828

Following gene: 116695832

Centisome position: 73.46

GC content: 67.57

Gene sequence:

>1446_bases
ATGCAAGCCGTAGCCCCCCGCAGCAGCCTCCTTGCCGGCGAGCAGTCCACCGCGCCCACCCGGCCGTACGACCCCGCCTA
CGATCCCCTGCACACACCCACCCCCGGTCACGGCCGCGAATACGCGCCCACCTACTGGATCGGCACCGCGGGCGAACCGC
CCGCCGACGACGGCCCGATCACGCATGACATCGACGTGGATGTGGCGATCATCGGCTCGGGCTTCACCGGCCTGACCTGC
GCCATCTTCCTGGCACAGGAATACGGCATCAAGGCCACCGTGCTCGAAGCCAACCGCGTCAGCTGGGGTTGCAGCACGCG
CAACGGCGGCCAGGCGCAATGCGCGTCCGGGCGGCTCAAGCGCTCGCAGTGGATCCAGCGCTACGGCCTGGACACCGCGC
TGCGCCTGCATGAAGAAATCTGCGACGGCATGGAGACCTTCAAGGGCCTGATCCAGGACATCAACTGCGATCCGCAGCCT
GGCGGCCACCTGTATATCGCGCACCGCGCCAAGGTGATGCCGGCGCTGGAGAAGGAAGCCAAGCTCCTGCGCGAAGTCTT
CAAGTACGACGCACGGATCATGGACGCCGACACCGTGCGGCGCGACTATGTCGACGACAAGGAAGCCGCGGGCGCCATGC
ATGAGCCCGAAGGCATCGGCATCCACGCCGGCAAGCTCGCCTTCGGCTACCTGCGCCGCGCGCGCGAGCTGGGCGCCAAG
GTGCATCCGTCCAGCCCGGTGACCGGCTGGGAAACGCGCAACGGCGTGCACTACCTGCGCACCCCCGGCGGCATCGTGCG
CGCCCGCGCCGTGGGCGTGGCCACCGGCGGCTATACCTCGCAGACGCTGCACCGCGAGCTCAAGAACCGGCTGTTCCCGA
TCCTGTCGAACTCCATCGTCACGCGCCCGCTCACGGCCAGCGAACTGGCCGCGTGCAACTTCCGCACCACGCAGGTCATC
ACCGACACCCGCATCCTGCGCCACTACTACCGCCTGATGCCAGATGGCCGCCTGCAGATCGGCAGCCGCAGCGCCATCAC
CGGCAACGATGCGCCGCAGGAGCAGTACAAGCAGAAGCTGATCGACGACATGCACCGCAAGTTCCCCGCGCTGCAGGGGA
TCCAGGTCGATTACTCGTGGTGGGGCTGGGTCGATGTCAGCCACGACATGATGCCGCGCATCACCCAGCCGGATCCGGCC
CAGTCGATCTACTACGCCATGGGCTACGGCGGCAACGGCGTGATGTACTCCGCGCAGGCCGGCAAGCGCCTGGCGGCGCT
GATCGCCGGCAAGGCCGCCGCGCTGCCGGAACTGCCAATCTTCCGCTCGCCGCTGCCGTTCCCGAACGTGCGCGAGATGG
TGGAATCGCAGATGTTTGCGCCGTTCCGAAGGATGGGGCAGCGGGTGCTGTACCACTGGTATCACCTGAAGGACGACGTG
CTGTAA

Upstream 100 bases:

>100_bases
CGTCTTCACCTTCCGCGACGGCAAGATCGCGGTCAAGAACGCGTACCGCAAGGATCGCCCGCCCGTCGTAGCGCCCGCAG
CCTGACCGAGGAGACGCGCC

Downstream 100 bases:

>100_bases
CTGGCGCGTGGGCGTGCCGCCCCTGGCGCGCCCACGCTTCAGGCCTCGCTCAGAACAGCGTGTAGCCCCCGTCGATCACA
AAGGTATCGCCCGTGTGGTA

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MQAVAPRSSLLAGEQSTAPTRPYDPAYDPLHTPTPGHGREYAPTYWIGTAGEPPADDGPITHDIDVDVAIIGSGFTGLTC
AIFLAQEYGIKATVLEANRVSWGCSTRNGGQAQCASGRLKRSQWIQRYGLDTALRLHEEICDGMETFKGLIQDINCDPQP
GGHLYIAHRAKVMPALEKEAKLLREVFKYDARIMDADTVRRDYVDDKEAAGAMHEPEGIGIHAGKLAFGYLRRARELGAK
VHPSSPVTGWETRNGVHYLRTPGGIVRARAVGVATGGYTSQTLHRELKNRLFPILSNSIVTRPLTASELAACNFRTTQVI
TDTRILRHYYRLMPDGRLQIGSRSAITGNDAPQEQYKQKLIDDMHRKFPALQGIQVDYSWWGWVDVSHDMMPRITQPDPA
QSIYYAMGYGGNGVMYSAQAGKRLAALIAGKAAALPELPIFRSPLPFPNVREMVESQMFAPFRRMGQRVLYHWYHLKDDV
L

Sequences:

>Translated_481_residues
MQAVAPRSSLLAGEQSTAPTRPYDPAYDPLHTPTPGHGREYAPTYWIGTAGEPPADDGPITHDIDVDVAIIGSGFTGLTC
AIFLAQEYGIKATVLEANRVSWGCSTRNGGQAQCASGRLKRSQWIQRYGLDTALRLHEEICDGMETFKGLIQDINCDPQP
GGHLYIAHRAKVMPALEKEAKLLREVFKYDARIMDADTVRRDYVDDKEAAGAMHEPEGIGIHAGKLAFGYLRRARELGAK
VHPSSPVTGWETRNGVHYLRTPGGIVRARAVGVATGGYTSQTLHRELKNRLFPILSNSIVTRPLTASELAACNFRTTQVI
TDTRILRHYYRLMPDGRLQIGSRSAITGNDAPQEQYKQKLIDDMHRKFPALQGIQVDYSWWGWVDVSHDMMPRITQPDPA
QSIYYAMGYGGNGVMYSAQAGKRLAALIAGKAAALPELPIFRSPLPFPNVREMVESQMFAPFRRMGQRVLYHWYHLKDDV
L
>Mature_481_residues
MQAVAPRSSLLAGEQSTAPTRPYDPAYDPLHTPTPGHGREYAPTYWIGTAGEPPADDGPITHDIDVDVAIIGSGFTGLTC
AIFLAQEYGIKATVLEANRVSWGCSTRNGGQAQCASGRLKRSQWIQRYGLDTALRLHEEICDGMETFKGLIQDINCDPQP
GGHLYIAHRAKVMPALEKEAKLLREVFKYDARIMDADTVRRDYVDDKEAAGAMHEPEGIGIHAGKLAFGYLRRARELGAK
VHPSSPVTGWETRNGVHYLRTPGGIVRARAVGVATGGYTSQTLHRELKNRLFPILSNSIVTRPLTASELAACNFRTTQVI
TDTRILRHYYRLMPDGRLQIGSRSAITGNDAPQEQYKQKLIDDMHRKFPALQGIQVDYSWWGWVDVSHDMMPRITQPDPA
QSIYYAMGYGGNGVMYSAQAGKRLAALIAGKAAALPELPIFRSPLPFPNVREMVESQMFAPFRRMGQRVLYHWYHLKDDV
L

Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787559, Length=446, Percent_Identity=31.6143497757848, Blast_Score=169, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 53446; Mature: 53446

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAVAPRSSLLAGEQSTAPTRPYDPAYDPLHTPTPGHGREYAPTYWIGTAGEPPADDGPI
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCE
THDIDVDVAIIGSGFTGLTCAIFLAQEYGIKATVLEANRVSWGCSTRNGGQAQCASGRLK
EEECCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCHHHCCHHH
RSQWIQRYGLDTALRLHEEICDGMETFKGLIQDINCDPQPGGHLYIAHRAKVMPALEKEA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHH
KLLREVFKYDARIMDADTVRRDYVDDKEAAGAMHEPEGIGIHAGKLAFGYLRRARELGAK
HHHHHHHHHCCEEECHHHHHHHCCCCHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCE
VHPSSPVTGWETRNGVHYLRTPGGIVRARAVGVATGGYTSQTLHRELKNRLFPILSNSIV
ECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHH
TRPLTASELAACNFRTTQVITDTRILRHYYRLMPDGRLQIGSRSAITGNDAPQEQYKQKL
CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHH
IDDMHRKFPALQGIQVDYSWWGWVDVSHDMMPRITQPDPAQSIYYAMGYGGNGVMYSAQA
HHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCC
GKRLAALIAGKAAALPELPIFRSPLPFPNVREMVESQMFAPFRRMGQRVLYHWYHLKDDV
CHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MQAVAPRSSLLAGEQSTAPTRPYDPAYDPLHTPTPGHGREYAPTYWIGTAGEPPADDGPI
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCE
THDIDVDVAIIGSGFTGLTCAIFLAQEYGIKATVLEANRVSWGCSTRNGGQAQCASGRLK
EEECCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCHHHCCHHH
RSQWIQRYGLDTALRLHEEICDGMETFKGLIQDINCDPQPGGHLYIAHRAKVMPALEKEA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHH
KLLREVFKYDARIMDADTVRRDYVDDKEAAGAMHEPEGIGIHAGKLAFGYLRRARELGAK
HHHHHHHHHCCEEECHHHHHHHCCCCHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCE
VHPSSPVTGWETRNGVHYLRTPGGIVRARAVGVATGGYTSQTLHRELKNRLFPILSNSIV
ECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHH
TRPLTASELAACNFRTTQVITDTRILRHYYRLMPDGRLQIGSRSAITGNDAPQEQYKQKL
CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHH
IDDMHRKFPALQGIQVDYSWWGWVDVSHDMMPRITQPDPAQSIYYAMGYGGNGVMYSAQA
HHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCC
GKRLAALIAGKAAALPELPIFRSPLPFPNVREMVESQMFAPFRRMGQRVLYHWYHLKDDV
CHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553; 7984428 [H]