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The map label for this gene is arnB [H]

Identifier: 116695578

GI number: 116695578

Start: 1850928

End: 1852100

Strand: Direct

Name: arnB [H]

Synonym: H16_B1639

Alternate gene names: 116695578

Gene position: 1850928-1852100 (Clockwise)

Preceding gene: 116695577

Following gene: 116695579

Centisome position: 63.55

GC content: 67.77

Gene sequence:

>1173_bases
ATGACCGCATCCGCCCCTGAGTTCCTGCCTTTTGTCCGGCCTGACATCGACGCCGCCGCCATTGCCGAAGTCAGCAAGGT
GCTGGCCTCGGGCTGGATCACCTCCGGCCCGAAGATGCAGGCCTTCGAGGCCGCGCTGTCAGGCCTGTTCGGCGGACGCC
CGGTGCGCACCTTCGCCAATGGCTCGGCCACGATGGAGATCGCGCTGCGCATTGCCGATATCGGGCCGGGCGATGAGGTC
ATCACCACGCCGGTCACCTGGGTCGCCACCGCCAACGTGGTGCTGGCAGTAGGCGCCCGGCCGGTGTTCGTCGATATCGA
CCCGCGCACGCGCAATCTCGACCTGGATGCCGTCGAGGCCGCGATCACGCCGCGCACGCGCGCCATCATGCCGGTGTACC
TGTCGGGGCTGCCGGTGGACATGGACCGCCTGTACGCCATTGCCAGCAAGCACGGGCTGCGCGTGATCGAGGATGCCGCG
CAGGCAATCGACTCGCGCTGGCGCGGCCAGCGCATCGGCGCCCTTGGCGACCTGGTCAGCTTCAGCTTCCAGGCCAACAA
GAACATCACCACCATCGAAGGCGGCTGCCTGGTGATGAACACGCCCGAAGAAGCCGTGCGCGCCGAGCGCCTGCGGCTGC
AGGGCGTGATCCGCACCGGTATGGACGGCATGGATGTCGAAGAGCCCGGCGGCAAGTTCAACCTGACCGACGTCAACGCC
GCGGTCGGGCTGGCGCAGCTGGGCAAGCTCGACGCCATCACCGCGCGCCGCGCCGAGCTGGCCGAGACGTATTTCCGCTG
TGCCGCCGACAGTGGCCTGGAGGCGCTGGGCATCGAGCTGCCGCAAGCGCTGGATGCACACGATGCCACCACCAACTGGC
ACATGTTCCAGGTGGTGCTGCCGACCGAGCGCCTGCAAGGCGGCCCGGCCCGGGCGCGCCAGCAGGTCATGGAGGCCATG
CGCGAGCGCGGCATCGGCACCGGCGTGCACTACCCGCCCATTCATCTTTTTACCTACTACCGCTCGCTCGGCTGGCGCGA
AGGCATGCTGCCGCATGCCGAACGCATCGGGCGCGGCATCGTCACGCTGCCGCTGTTCCCCGCGATGCAAGCCACCGATG
TGGAGCGGGTCTGTGCAATCCTCAGCGAAACATGCAAACGTCTCTCCAAATGA

Upstream 100 bases:

>100_bases
ATCCTGCTGATACTGGCGGGCGTCTTCCTGATCGCCCGCTCATGACGCGCCTGCGCGCACGCCGCCAGTTCCGACACCGA
CCGTACTTCCTCGCCCTGCC

Downstream 100 bases:

>100_bases
GCCCGGTCGAAGTCTCGGTCGTCATTCCGGTCTACAACGAAGAAGACGGGCTGCAAGCCCTGTTCGACCGCCTCTATCCG
GCGCTGGATGGCCTTGGCGA

Product: cell wall biogenesis regulatory protein

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTASAPEFLPFVRPDIDAAAIAEVSKVLASGWITSGPKMQAFEAALSGLFGGRPVRTFANGSATMEIALRIADIGPGDEV
ITTPVTWVATANVVLAVGARPVFVDIDPRTRNLDLDAVEAAITPRTRAIMPVYLSGLPVDMDRLYAIASKHGLRVIEDAA
QAIDSRWRGQRIGALGDLVSFSFQANKNITTIEGGCLVMNTPEEAVRAERLRLQGVIRTGMDGMDVEEPGGKFNLTDVNA
AVGLAQLGKLDAITARRAELAETYFRCAADSGLEALGIELPQALDAHDATTNWHMFQVVLPTERLQGGPARARQQVMEAM
RERGIGTGVHYPPIHLFTYYRSLGWREGMLPHAERIGRGIVTLPLFPAMQATDVERVCAILSETCKRLSK

Sequences:

>Translated_390_residues
MTASAPEFLPFVRPDIDAAAIAEVSKVLASGWITSGPKMQAFEAALSGLFGGRPVRTFANGSATMEIALRIADIGPGDEV
ITTPVTWVATANVVLAVGARPVFVDIDPRTRNLDLDAVEAAITPRTRAIMPVYLSGLPVDMDRLYAIASKHGLRVIEDAA
QAIDSRWRGQRIGALGDLVSFSFQANKNITTIEGGCLVMNTPEEAVRAERLRLQGVIRTGMDGMDVEEPGGKFNLTDVNA
AVGLAQLGKLDAITARRAELAETYFRCAADSGLEALGIELPQALDAHDATTNWHMFQVVLPTERLQGGPARARQQVMEAM
RERGIGTGVHYPPIHLFTYYRSLGWREGMLPHAERIGRGIVTLPLFPAMQATDVERVCAILSETCKRLSK
>Mature_389_residues
TASAPEFLPFVRPDIDAAAIAEVSKVLASGWITSGPKMQAFEAALSGLFGGRPVRTFANGSATMEIALRIADIGPGDEVI
TTPVTWVATANVVLAVGARPVFVDIDPRTRNLDLDAVEAAITPRTRAIMPVYLSGLPVDMDRLYAIASKHGLRVIEDAAQ
AIDSRWRGQRIGALGDLVSFSFQANKNITTIEGGCLVMNTPEEAVRAERLRLQGVIRTGMDGMDVEEPGGKFNLTDVNAA
VGLAQLGKLDAITARRAELAETYFRCAADSGLEALGIELPQALDAHDATTNWHMFQVVLPTERLQGGPARARQQVMEAMR
ERGIGTGVHYPPIHLFTYYRSLGWREGMLPHAERIGRGIVTLPLFPAMQATDVERVCAILSETCKRLSK

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=40.4639175257732, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI2367285, Length=380, Percent_Identity=31.8421052631579, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 42173; Mature: 42042

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASAPEFLPFVRPDIDAAAIAEVSKVLASGWITSGPKMQAFEAALSGLFGGRPVRTFAN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEECC
GSATMEIALRIADIGPGDEVITTPVTWVATANVVLAVGARPVFVDIDPRTRNLDLDAVEA
CCEEEEEEEEEECCCCCCCEEECCCCEEECCCEEEEECCCEEEEEECCCCCCCCHHHHHH
AITPRTRAIMPVYLSGLPVDMDRLYAIASKHGLRVIEDAAQAIDSRWRGQRIGALGDLVS
HCCCCCCEEEEHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FSFQANKNITTIEGGCLVMNTPEEAVRAERLRLQGVIRTGMDGMDVEEPGGKFNLTDVNA
HEEECCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHH
AVGLAQLGKLDAITARRAELAETYFRCAADSGLEALGIELPQALDAHDATTNWHMFQVVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCCCCCEEEEEEEE
PTERLQGGPARARQQVMEAMRERGIGTGVHYPPIHLFTYYRSLGWREGMLPHAERIGRGI
CHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCE
VTLPLFPAMQATDVERVCAILSETCKRLSK
EEECCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TASAPEFLPFVRPDIDAAAIAEVSKVLASGWITSGPKMQAFEAALSGLFGGRPVRTFAN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEECC
GSATMEIALRIADIGPGDEVITTPVTWVATANVVLAVGARPVFVDIDPRTRNLDLDAVEA
CCEEEEEEEEEECCCCCCCEEECCCCEEECCCEEEEECCCEEEEEECCCCCCCCHHHHHH
AITPRTRAIMPVYLSGLPVDMDRLYAIASKHGLRVIEDAAQAIDSRWRGQRIGALGDLVS
HCCCCCCEEEEHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FSFQANKNITTIEGGCLVMNTPEEAVRAERLRLQGVIRTGMDGMDVEEPGGKFNLTDVNA
HEEECCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHH
AVGLAQLGKLDAITARRAELAETYFRCAADSGLEALGIELPQALDAHDATTNWHMFQVVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCCCCCEEEEEEEE
PTERLQGGPARARQQVMEAMRERGIGTGVHYPPIHLFTYYRSLGWREGMLPHAERIGRGI
CHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCE
VTLPLFPAMQATDVERVCAILSETCKRLSK
EEECCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA