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The map label for this gene is arnC [H]

Identifier: 116695579

GI number: 116695579

Start: 1852097

End: 1853068

Strand: Direct

Name: arnC [H]

Synonym: H16_B1640

Alternate gene names: 116695579

Gene position: 1852097-1853068 (Clockwise)

Preceding gene: 116695578

Following gene: 116695580

Centisome position: 63.59

GC content: 64.4

Gene sequence:

>972_bases
ATGAGCCCGGTCGAAGTCTCGGTCGTCATTCCGGTCTACAACGAAGAAGACGGGCTGCAAGCCCTGTTCGACCGCCTCTA
TCCGGCGCTGGATGGCCTTGGCGAGTCGTACGAGATCATCTTCATCAACGACGGCAGCGTCGACCGCTCGGCGCAGCTGC
TGGCGGCGCAGTTCCACAAGCGCCCGGATGTGACCCGGGTGGTGCTGTTCGCCGGCAATTTCGGCCAGCATATGGCGATC
CTGGCGGGCTTCGAGCAGACCCGCGGCAAGATCGTGATCACGCTGGACGCCGACCTGCAGAACCCGCCGGAAGAAATCCC
GCGCCTGGTCGAAGCCATGCGCGCCGGCCACGACTACGTCGGCACCATCCGCCGCCAGCGCAACGACACCGCGTTCCGCC
GCTATGCCTCGCGCGCGATGAACCGGCTGCGCGAGCGCATCACCAAGATCCGCATGACGGACCAGGGCTGCATGCTGCGC
GCCTATGACCGCAATGTGGTCGACACGATCAATGCCTGCCGCGAGGTCAATACCTTCATCCCCGCGCTGGCCTACACCTT
TGCTTCCAATCCGGTCGAAATCGAAGTCGGTCACGAACAGCGCCACGCAGGCGAATCCAAGTATTCGCTGTACCAGCTGA
TCCGCCTGAACTTCGACTTGGTGACCGGCTTTTCGATCGTGCCGCTGCAGTGGTTCTCGGCGATCGGCACGATCCTGTCG
CTGCTCTCGGGCGTGCTGTTCGTGGTGCTGCTGGTGCGGCGCTTCGTGCTCGGCTCGGAAGTCCAGGGTGTGTTCACGCT
GTTCGCAATGAACTTCTTCCTGATCGGCATCCTGCTGTTCGGCGTGGGCCTGCTGGGCGAGTACGTCGGCCGCATCCACC
AGGAAGTGCGCGACCGCCCGCGCTACCGCATCAAGGCCGTGCTGGAAGCGGACCGGCGTGTCACGCCGGCTGCCGCTGGC
GCGGAGCAATGA

Upstream 100 bases:

>100_bases
GGCGCGGCATCGTCACGCTGCCGCTGTTCCCCGCGATGCAAGCCACCGATGTGGAGCGGGTCTGTGCAATCCTCAGCGAA
ACATGCAAACGTCTCTCCAA

Downstream 100 bases:

>100_bases
TGCGCGCCGTCGTCTTCGGCTACCACAATGTCGGCGACCGCTGCCTGCGCGTGCTGCATGCGCGCGGCGTGGAGGTTGCG
CTGGTGATCACGCACCGCGA

Product: cell wall biogenesis glycosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGESYEIIFINDGSVDRSAQLLAAQFHKRPDVTRVVLFAGNFGQHMAI
LAGFEQTRGKIVITLDADLQNPPEEIPRLVEAMRAGHDYVGTIRRQRNDTAFRRYASRAMNRLRERITKIRMTDQGCMLR
AYDRNVVDTINACREVNTFIPALAYTFASNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSAIGTILS
LLSGVLFVVLLVRRFVLGSEVQGVFTLFAMNFFLIGILLFGVGLLGEYVGRIHQEVRDRPRYRIKAVLEADRRVTPAAAG
AEQ

Sequences:

>Translated_323_residues
MSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGESYEIIFINDGSVDRSAQLLAAQFHKRPDVTRVVLFAGNFGQHMAI
LAGFEQTRGKIVITLDADLQNPPEEIPRLVEAMRAGHDYVGTIRRQRNDTAFRRYASRAMNRLRERITKIRMTDQGCMLR
AYDRNVVDTINACREVNTFIPALAYTFASNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSAIGTILS
LLSGVLFVVLLVRRFVLGSEVQGVFTLFAMNFFLIGILLFGVGLLGEYVGRIHQEVRDRPRYRIKAVLEADRRVTPAAAG
AEQ
>Mature_322_residues
SPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGESYEIIFINDGSVDRSAQLLAAQFHKRPDVTRVVLFAGNFGQHMAIL
AGFEQTRGKIVITLDADLQNPPEEIPRLVEAMRAGHDYVGTIRRQRNDTAFRRYASRAMNRLRERITKIRMTDQGCMLRA
YDRNVVDTINACREVNTFIPALAYTFASNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSAIGTILSL
LSGVLFVVLLVRRFVLGSEVQGVFTLFAMNFFLIGILLFGVGLLGEYVGRIHQEVRDRPRYRIKAVLEADRRVTPAAAGA
EQ

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=236, Percent_Identity=27.1186440677966, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1788588, Length=316, Percent_Identity=47.4683544303797, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=30.4918032786885, Blast_Score=161, Evalue=6e-41,
Organism=Saccharomyces cerevisiae, GI6325441, Length=121, Percent_Identity=33.0578512396694, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36383; Mature: 36251

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGESYEIIFINDGSVDRSAQLLAAQFHK
CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHC
RPDVTRVVLFAGNFGQHMAILAGFEQTRGKIVITLDADLQNPPEEIPRLVEAMRAGHDYV
CCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHH
GTIRRQRNDTAFRRYASRAMNRLRERITKIRMTDQGCMLRAYDRNVVDTINACREVNTFI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHH
PALAYTFASNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSAIGTILS
HHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLSGVLFVVLLVRRFVLGSEVQGVFTLFAMNFFLIGILLFGVGLLGEYVGRIHQEVRDRP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYRIKAVLEADRRVTPAAAGAEQ
HHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGESYEIIFINDGSVDRSAQLLAAQFHK
CCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHC
RPDVTRVVLFAGNFGQHMAILAGFEQTRGKIVITLDADLQNPPEEIPRLVEAMRAGHDYV
CCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHH
GTIRRQRNDTAFRRYASRAMNRLRERITKIRMTDQGCMLRAYDRNVVDTINACREVNTFI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHH
PALAYTFASNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSAIGTILS
HHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLSGVLFVVLLVRRFVLGSEVQGVFTLFAMNFFLIGILLFGVGLLGEYVGRIHQEVRDRP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYRIKAVLEADRRVTPAAAGAEQ
HHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA