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The map label for this gene is frcC [H]

Identifier: 116695440

GI number: 116695440

Start: 1684296

End: 1685318

Strand: Direct

Name: frcC [H]

Synonym: H16_B1499

Alternate gene names: 116695440

Gene position: 1684296-1685318 (Clockwise)

Preceding gene: 116695439

Following gene: 116695441

Centisome position: 57.83

GC content: 67.25

Gene sequence:

>1023_bases
ATGCGCAATCCCCTCTCATCCACGGCCCATGGCGTCACCGCCCAGGCTGCCACGCCGGTGGGCCACGCCACCGGCCGCGC
CACCACGCAGGAACGCCTGCGCGCGCTCGGCATGCTGCCGGTGCTGGTGCTGCTCTGCTTTGGCTTCACGCTGCTGACCG
AGAACTTCGCCAGCCTGCAGAACCTGTCGATCATCGCCCAGCAGGCGTCGATCAACCTGGTACTGGCCGCGGGCATGACA
TTCGTGATCCTGACCGGGGGCATCGACCTGTCGGTGGGATCGATCCTGTCGGTGTCGGCCGTGGTGGCGATGCTGGTCTC
GCTGATGCCGCAACTGGCGGCGCTGAGCGTGCCGGCAGCGCTGCTGTGCGGATTGCTGTTCGGACTGGTCAACGGTGCGC
TGATCGCCTTCATGAAGCTGCCGCCGTTCATCGTGACGCTGGGCAGCCTGACCGCGGTGCGCGGGCTGGCGCGGCTGGTC
GGCAACGACAGCACGGTCTACAACCCGGATATCCCGTTCGCATTTATCGGCAACGGCGACCTGCTGGGCATCCCCTGGCT
GGTGGTGATTGCCGTTGCGGTGGTCGCGGTGTCGTGGCTGGTGCTGCGCCGCACGGTGCTGGGGCTGCAGATCTACGCGG
TCGGCGGCAATGCCGAGGCGGCGCGCCTGTCGGGCATCAAGGTGTGGGTGGTGCTTCTGTTCGTCTATGCGGTGTCGGGC
CTGCTGTCGGGGCTGGGCGGCGTGATGTCGGCGTCGCGGCTGTATGCGGCCAACGGGCTGCAGCTGGGGCAGTCCTATGA
GCTGGATGCGATCGCCGCGGTGATCCTGGGCGGCACCAGCTTTGTCGGCGGGGTCGGATCGATTGCCGGCACGCTGGTGG
GTGCGCTGATCATCGCGGTGCTGTCCAACGGGCTGATCCTGCTGGGCGTGTCGGATATCTGGCAATACATCATCAAGGGC
CTGGTGATCATCGGCGCGGTCGCGCTCGACCGCTATCGCCAGAAGGGCTCGGCCCGTACCTGA

Upstream 100 bases:

>100_bases
CCGCCCCCGGTCCTGCACTGAACCGCTGAATTCCCGTACAGGCCGGCAAAGAACGGCCGCACCGGGGCGGCATCCCGCCT
CGCAGCATCAGGAGACACAT

Downstream 100 bases:

>100_bases
GCTGCGGCCGCACAGGAGACAGACCGTGATCCAACCCATCCTCAAAGCCCTTGCCGCGAGCGCGCTGGCAGCGCTGTGCG
CGGCGCCGGCCCTGGCACAA

Product: ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRNPLSSTAHGVTAQAATPVGHATGRATTQERLRALGMLPVLVLLCFGFTLLTENFASLQNLSIIAQQASINLVLAAGMT
FVILTGGIDLSVGSILSVSAVVAMLVSLMPQLAALSVPAALLCGLLFGLVNGALIAFMKLPPFIVTLGSLTAVRGLARLV
GNDSTVYNPDIPFAFIGNGDLLGIPWLVVIAVAVVAVSWLVLRRTVLGLQIYAVGGNAEAARLSGIKVWVVLLFVYAVSG
LLSGLGGVMSASRLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIAGTLVGALIIAVLSNGLILLGVSDIWQYIIKG
LVIIGAVALDRYRQKGSART

Sequences:

>Translated_340_residues
MRNPLSSTAHGVTAQAATPVGHATGRATTQERLRALGMLPVLVLLCFGFTLLTENFASLQNLSIIAQQASINLVLAAGMT
FVILTGGIDLSVGSILSVSAVVAMLVSLMPQLAALSVPAALLCGLLFGLVNGALIAFMKLPPFIVTLGSLTAVRGLARLV
GNDSTVYNPDIPFAFIGNGDLLGIPWLVVIAVAVVAVSWLVLRRTVLGLQIYAVGGNAEAARLSGIKVWVVLLFVYAVSG
LLSGLGGVMSASRLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIAGTLVGALIIAVLSNGLILLGVSDIWQYIIKG
LVIIGAVALDRYRQKGSART
>Mature_340_residues
MRNPLSSTAHGVTAQAATPVGHATGRATTQERLRALGMLPVLVLLCFGFTLLTENFASLQNLSIIAQQASINLVLAAGMT
FVILTGGIDLSVGSILSVSAVVAMLVSLMPQLAALSVPAALLCGLLFGLVNGALIAFMKLPPFIVTLGSLTAVRGLARLV
GNDSTVYNPDIPFAFIGNGDLLGIPWLVVIAVAVVAVSWLVLRRTVLGLQIYAVGGNAEAARLSGIKVWVVLLFVYAVSG
LLSGLGGVMSASRLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIAGTLVGALIIAVLSNGLILLGVSDIWQYIIKG
LVIIGAVALDRYRQKGSART

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4158

COG function: function code R; Predicted ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=314, Percent_Identity=43.6305732484076, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI1790524, Length=289, Percent_Identity=39.1003460207612, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI145693152, Length=304, Percent_Identity=35.5263157894737, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1788896, Length=318, Percent_Identity=34.2767295597484, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788471, Length=292, Percent_Identity=39.7260273972603, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI145693214, Length=254, Percent_Identity=38.5826771653543, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082395, Length=286, Percent_Identity=35.6643356643357, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789992, Length=362, Percent_Identity=31.2154696132597, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787793, Length=289, Percent_Identity=33.9100346020761, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787794, Length=275, Percent_Identity=34.1818181818182, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34903; Mature: 34903

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNPLSSTAHGVTAQAATPVGHATGRATTQERLRALGMLPVLVLLCFGFTLLTENFASLQ
CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLSIIAQQASINLVLAAGMTFVILTGGIDLSVGSILSVSAVVAMLVSLMPQLAALSVPAA
HHHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLCGLLFGLVNGALIAFMKLPPFIVTLGSLTAVRGLARLVGNDSTVYNPDIPFAFIGNGD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEECCCC
LLGIPWLVVIAVAVVAVSWLVLRRTVLGLQIYAVGGNAEAARLSGIKVWVVLLFVYAVSG
EEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLSGLGGVMSASRLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIAGTLVGALIIAV
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHH
LSNGLILLGVSDIWQYIIKGLVIIGAVALDRYRQKGSART
HHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRNPLSSTAHGVTAQAATPVGHATGRATTQERLRALGMLPVLVLLCFGFTLLTENFASLQ
CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLSIIAQQASINLVLAAGMTFVILTGGIDLSVGSILSVSAVVAMLVSLMPQLAALSVPAA
HHHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLCGLLFGLVNGALIAFMKLPPFIVTLGSLTAVRGLARLVGNDSTVYNPDIPFAFIGNGD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEECCCC
LLGIPWLVVIAVAVVAVSWLVLRRTVLGLQIYAVGGNAEAARLSGIKVWVVLLFVYAVSG
EEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLSGLGGVMSASRLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIAGTLVGALIIAV
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHH
LSNGLILLGVSDIWQYIIKGLVIIGAVALDRYRQKGSART
HHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]