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The map label for this gene is frcB [H]

Identifier: 116695441

GI number: 116695441

Start: 1685344

End: 1686330

Strand: Direct

Name: frcB [H]

Synonym: H16_B1500

Alternate gene names: 116695441

Gene position: 1685344-1686330 (Clockwise)

Preceding gene: 116695440

Following gene: 116695442

Centisome position: 57.87

GC content: 68.9

Gene sequence:

>987_bases
GTGATCCAACCCATCCTCAAAGCCCTTGCCGCGAGCGCGCTGGCAGCGCTGTGCGCGGCGCCGGCCCTGGCACAAGCGCC
CGCGCAGACCGCGCCGGCTTCAGATGTCCAGTCCGTGCAGCGCCCGCTCAAGAAGGTTGGCGTGACCCTGGGTTCGCTGG
GCAACCCGTATTTTGTCGCACTGGCCCGCGGTGCCGAGGCCGCGGCCCTGCAGGCCAACCCGAAGGCAAAGGTCACCGTG
CTGTCGGCGGACTACGACCTGAACAAGCAGTTCATGCACATCGACAGCTTTATCGTCGCCGGCGTCGACCTGATCCTGAT
CAACGCCGCCGACGCCCGCGCCATCGAGCCGGCGGTACGCAAGGCGCGCAAGGCCGGCATCGTGGTGGTGGCGGTCGATG
TGGCCGCCGCCGGCGCCGATGCCACCGTGCAGACCGACAACACCCAGGCCGGCGAACTCGCCTGCGGCTTTATCGCCGAC
CGGCTCAAGGGCCGCGGCAACGTCATCATCCAGAACGGCCCGCCCGTATCGGCGGTGCTGGACCGGGTCAAGGGCTGCAA
GACCGTGCTGGCGCGCCACCCCGATATCCGCATCCTGTCCGACGACCAGGATGCCAAGGGCTCCCGCGAAGGCGGGCTGA
ACGTAATGCAGCTGTACCTGACGCGCTTTCCCAAGGTGGATGCGGTCTTCACCATCAACGACCCGCAGGCCGTGGGCGCG
GACCTGGCCGCGCGCCAGCTCAACCGCCGCGGCATCGTGATTGCCTCGGTCGACGGCGCGCCTGACATCGAGGCGGCATT
GAAGGCCGACACGCTGGTGCAGGCCTCGGCCAGCCAGGACCCGTGGGCCATTGCCCGCACCGCTGTGCAACTGGGCGTGG
GCATGATGAATGGCCAGCGCCCGCCCAACCCGACCGTGCTGCTGCCGTCCACGCTGGTGACGCGTGCCAATGTAGGCCAG
TACAAGGGCTGGGCCGCGCCGCGGTAA

Upstream 100 bases:

>100_bases
ATCATCAAGGGCCTGGTGATCATCGGCGCGGTCGCGCTCGACCGCTATCGCCAGAAGGGCTCGGCCCGTACCTGAGCTGC
GGCCGCACAGGAGACAGACC

Downstream 100 bases:

>100_bases
GCGGCACGGCCGGTCCTTCCACCCTCTTTTCCATTTGCTGATTCCATGATGGCTAGCCCCCCTGCCGGCGCTCCGGCACC
TGAACCTGCTCCAGAGTTCG

Product: ABC transporter periplasmic protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIQPILKALAASALAALCAAPALAQAPAQTAPASDVQSVQRPLKKVGVTLGSLGNPYFVALARGAEAAALQANPKAKVTV
LSADYDLNKQFMHIDSFIVAGVDLILINAADARAIEPAVRKARKAGIVVVAVDVAAAGADATVQTDNTQAGELACGFIAD
RLKGRGNVIIQNGPPVSAVLDRVKGCKTVLARHPDIRILSDDQDAKGSREGGLNVMQLYLTRFPKVDAVFTINDPQAVGA
DLAARQLNRRGIVIASVDGAPDIEAALKADTLVQASASQDPWAIARTAVQLGVGMMNGQRPPNPTVLLPSTLVTRANVGQ
YKGWAAPR

Sequences:

>Translated_328_residues
MIQPILKALAASALAALCAAPALAQAPAQTAPASDVQSVQRPLKKVGVTLGSLGNPYFVALARGAEAAALQANPKAKVTV
LSADYDLNKQFMHIDSFIVAGVDLILINAADARAIEPAVRKARKAGIVVVAVDVAAAGADATVQTDNTQAGELACGFIAD
RLKGRGNVIIQNGPPVSAVLDRVKGCKTVLARHPDIRILSDDQDAKGSREGGLNVMQLYLTRFPKVDAVFTINDPQAVGA
DLAARQLNRRGIVIASVDGAPDIEAALKADTLVQASASQDPWAIARTAVQLGVGMMNGQRPPNPTVLLPSTLVTRANVGQ
YKGWAAPR
>Mature_328_residues
MIQPILKALAASALAALCAAPALAQAPAQTAPASDVQSVQRPLKKVGVTLGSLGNPYFVALARGAEAAALQANPKAKVTV
LSADYDLNKQFMHIDSFIVAGVDLILINAADARAIEPAVRKARKAGIVVVAVDVAAAGADATVQTDNTQAGELACGFIAD
RLKGRGNVIIQNGPPVSAVLDRVKGCKTVLARHPDIRILSDDQDAKGSREGGLNVMQLYLTRFPKVDAVFTINDPQAVGA
DLAARQLNRRGIVIASVDGAPDIEAALKADTLVQASASQDPWAIARTAVQLGVGMMNGQRPPNPTVLLPSTLVTRANVGQ
YKGWAAPR

Specific function: Involved in the high-affinity D-ribose membrane transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=292, Percent_Identity=30.8219178082192, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789990, Length=265, Percent_Identity=30.188679245283, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790674, Length=191, Percent_Identity=28.2722513089005, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34050; Mature: 34050

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQPILKALAASALAALCAAPALAQAPAQTAPASDVQSVQRPLKKVGVTLGSLGNPYFVA
CCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEE
LARGAEAAALQANPKAKVTVLSADYDLNKQFMHIDSFIVAGVDLILINAADARAIEPAVR
EECCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHH
KARKAGIVVVAVDVAAAGADATVQTDNTQAGELACGFIADRLKGRGNVIIQNGPPVSAVL
HHHHCCEEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHH
DRVKGCKTVLARHPDIRILSDDQDAKGSREGGLNVMQLYLTRFPKVDAVFTINDPQAVGA
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHH
DLAARQLNRRGIVIASVDGAPDIEAALKADTLVQASASQDPWAIARTAVQLGVGMMNGQR
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCC
PPNPTVLLPSTLVTRANVGQYKGWAAPR
CCCCEEECCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIQPILKALAASALAALCAAPALAQAPAQTAPASDVQSVQRPLKKVGVTLGSLGNPYFVA
CCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEE
LARGAEAAALQANPKAKVTVLSADYDLNKQFMHIDSFIVAGVDLILINAADARAIEPAVR
EECCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHH
KARKAGIVVVAVDVAAAGADATVQTDNTQAGELACGFIADRLKGRGNVIIQNGPPVSAVL
HHHHCCEEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHH
DRVKGCKTVLARHPDIRILSDDQDAKGSREGGLNVMQLYLTRFPKVDAVFTINDPQAVGA
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHH
DLAARQLNRRGIVIASVDGAPDIEAALKADTLVQASASQDPWAIARTAVQLGVGMMNGQR
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCC
PPNPTVLLPSTLVTRANVGQYKGWAAPR
CCCCEEECCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7921236 [H]