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The map label for this gene is fdoE

Identifier: 116695397

GI number: 116695397

Start: 1630877

End: 1631740

Strand: Direct

Name: fdoE

Synonym: H16_B1455

Alternate gene names: 116695397

Gene position: 1630877-1631740 (Clockwise)

Preceding gene: 116695396

Following gene: 116695399

Centisome position: 56.0

GC content: 69.91

Gene sequence:

>864_bases
ATGAACCAGCATCAGGCCACGCCGGGAACACTGCCATCGGACGAGGCCTCCCGGCATTTCACGCCGCTGATCCAGCCAGA
CCTTGCCGGTCTTTACAGCCGCCGCGCCGCACGCCTGCGCGCGTTGGCCGAAGGGCACGACCTTGCCGATTACCTGCGCC
TGGCCGCCCGCGTGGCCGAGGTGCAGGCATCGCTTGTGGCCGAGGCCGATGTGTCCGGCCCGGCAGACGCCAGGGCCATC
CCGCAGGAGGGGCATTGGGGCGCCCTGCTTGATCGGTTGATCGAGCGGCTCGCGCACGATGTTCCCGCCCCGGTCGCCCC
GCATCTTGCGGCGCTGCGCGCCCTCCCTGCGGATGCGCGCCTTGGCGCCGCCCAGGCGCTGACCGAGGGCCGCTTTGATG
CGGTGCCGGCAGCAATCGCGCCCTTCCTCTGGGCTGCGCTCTCGCTGCAATGTGCCAGCGCCGCGCGGGCGGCGCCCGTG
CCCGACAGCGGCCCGGCCGAGCACGCATCCTGCCCGGTCTGCGGCACTGCCCCCGTGGCAAGCCTGATCCTGATCGGCGA
CCGCCAGGGCATGCGCTATCTGCATTGCGCGCTCTGCGAGAGCCAGTGGCACATGGTGCGGGCGAAATGCACCAACTGCG
GCGAAGCCTCGGAGCTTGACTACCTCAGCTTCGACACCGCCGAAGCTACGGTGCGCGCCGAAAGCTGCGGGGTGTGCCAC
GGTTACCTGAAGGTGATCTCACTGGAACGCGACCCGCCGGCCGAGGCCGTGGCCGATGACCTTGCCTCCCTGGCGCTGGA
CGATGCTGTGACGGCGGAGGGCTATCAACGGACCGGGTTTAATCCCTTTGCGCTGCCGGGATGA

Upstream 100 bases:

>100_bases
GCTACGTCTCGCGCGCCTGGGCCAGGCAGCACCATGACCGCTGGTATGGCGAGTTGCAGGCAAAGGAGTCGAAAGCGGCG
CAAGCGAAGGGGAACGAGGC

Downstream 100 bases:

>100_bases
GGCGCTGCCCGACCTGTCCTGCTGACGACCAGATTCTTCGCCTATCCGAACGCCCGCACGCCAGTCATCCATTCGTGAAG
CACGAATCCGAACAGCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MNQHQATPGTLPSDEASRHFTPLIQPDLAGLYSRRAARLRALAEGHDLADYLRLAARVAEVQASLVAEADVSGPADARAI
PQEGHWGALLDRLIERLAHDVPAPVAPHLAALRALPADARLGAAQALTEGRFDAVPAAIAPFLWAALSLQCASAARAAPV
PDSGPAEHASCPVCGTAPVASLILIGDRQGMRYLHCALCESQWHMVRAKCTNCGEASELDYLSFDTAEATVRAESCGVCH
GYLKVISLERDPPAEAVADDLASLALDDAVTAEGYQRTGFNPFALPG

Sequences:

>Translated_287_residues
MNQHQATPGTLPSDEASRHFTPLIQPDLAGLYSRRAARLRALAEGHDLADYLRLAARVAEVQASLVAEADVSGPADARAI
PQEGHWGALLDRLIERLAHDVPAPVAPHLAALRALPADARLGAAQALTEGRFDAVPAAIAPFLWAALSLQCASAARAAPV
PDSGPAEHASCPVCGTAPVASLILIGDRQGMRYLHCALCESQWHMVRAKCTNCGEASELDYLSFDTAEATVRAESCGVCH
GYLKVISLERDPPAEAVADDLASLALDDAVTAEGYQRTGFNPFALPG
>Mature_287_residues
MNQHQATPGTLPSDEASRHFTPLIQPDLAGLYSRRAARLRALAEGHDLADYLRLAARVAEVQASLVAEADVSGPADARAI
PQEGHWGALLDRLIERLAHDVPAPVAPHLAALRALPADARLGAAQALTEGRFDAVPAAIAPFLWAALSLQCASAARAAPV
PDSGPAEHASCPVCGTAPVASLILIGDRQGMRYLHCALCESQWHMVRAKCTNCGEASELDYLSFDTAEATVRAESCGVCH
GYLKVISLERDPPAEAVADDLASLALDDAVTAEGYQRTGFNPFALPG

Specific function: Necessary for formate dehydrogenase activity

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family

Homologues:

Organism=Escherichia coli, GI1790324, Length=285, Percent_Identity=43.1578947368421, Blast_Score=228, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHE_CUPNH (Q0K181)

Other databases:

- EMBL:   AM260480
- RefSeq:   YP_840973.1
- ProteinModelPortal:   Q0K181
- SMR:   Q0K181
- STRING:   Q0K181
- GeneID:   4456571
- GenomeReviews:   AM260480_GR
- KEGG:   reh:H16_B1455
- eggNOG:   COG3058
- HOGENOM:   HBG678838
- OMA:   LCACEWH
- PhylomeDB:   Q0K181
- ProtClustDB:   CLSK2319552
- BioCyc:   REUT381666:H16_B1455-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00611
- InterPro:   IPR006452
- PIRSF:   PIRSF018296
- TIGRFAMs:   TIGR01562

Pfam domain/function: PF04216 FdhE

EC number: NA

Molecular weight: Translated: 30207; Mature: 30207

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHQATPGTLPSDEASRHFTPLIQPDLAGLYSRRAARLRALAEGHDLADYLRLAARVAE
CCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VQASLVAEADVSGPADARAIPQEGHWGALLDRLIERLAHDVPAPVAPHLAALRALPADAR
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
LGAAQALTEGRFDAVPAAIAPFLWAALSLQCASAARAAPVPDSGPAEHASCPVCGTAPVA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
SLILIGDRQGMRYLHCALCESQWHMVRAKCTNCGEASELDYLSFDTAEATVRAESCGVCH
HEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCHHH
GYLKVISLERDPPAEAVADDLASLALDDAVTAEGYQRTGFNPFALPG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
>Mature Secondary Structure
MNQHQATPGTLPSDEASRHFTPLIQPDLAGLYSRRAARLRALAEGHDLADYLRLAARVAE
CCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VQASLVAEADVSGPADARAIPQEGHWGALLDRLIERLAHDVPAPVAPHLAALRALPADAR
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
LGAAQALTEGRFDAVPAAIAPFLWAALSLQCASAARAAPVPDSGPAEHASCPVCGTAPVA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
SLILIGDRQGMRYLHCALCESQWHMVRAKCTNCGEASELDYLSFDTAEATVRAESCGVCH
HEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCHHH
GYLKVISLERDPPAEAVADDLASLALDDAVTAEGYQRTGFNPFALPG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA