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The map label for this gene is bkdR [H]

Identifier: 116695243

GI number: 116695243

Start: 1454384

End: 1454863

Strand: Direct

Name: bkdR [H]

Synonym: H16_B1299

Alternate gene names: 116695243

Gene position: 1454384-1454863 (Clockwise)

Preceding gene: 116695242

Following gene: 116695244

Centisome position: 49.94

GC content: 66.25

Gene sequence:

>480_bases
ATGCAGGAACCCGAACTGGATGAAATCAATATCCGGATCCTCGAGGCGTTGCAGCGCGACGCCAGCCTGACCAACGTCGA
GCTGGCCGCGCGCGTCAACCTCTCGCCGTCGCCTTGCCTGGCGCGCGTGCGCGCGTTGGAGCAGCGCGGGATCATCCGGC
AGCGCGTGACGCTGCTCGATCCGCAGAAGCTTGGCCTCAACGTCAACGTCTTTATCCACGTGTCGCTGGAGCGGCAGGCG
CGCGAGGGGCTGGATGCCTTCGAACGCGCCGTGCGCGCGCTGCCCAACGTGATGGAGTGCTACCTGATGACGGGCGATGC
CGACTACCTGATCCGCGCCGTGGTGGCCGACGTGCAGGCCGTGGAGCGGCTGATCGTCGACGAGATCACGCGCATCCCCG
GCGTCGCCAACATCCGCAGCAGCTTCGCACTCAAGCAGGTGATGTACGACACAGCCTTGCCGCTGCGCAATCCGCGCTAG

Upstream 100 bases:

>100_bases
CGCCGCGCGGCCTGTATTCTAGTGCTCTGCCCGGCGCCCCGTTTCCGCAAGGAGGCAGGGCGCCATGCACTTCACATCGA
GCCGGCCATACAGGAACCCC

Downstream 100 bases:

>100_bases
CCCGGCGTTCGGCGTGGGATATGCCGCGGCCTCAGCATTTTCGAGTGGTTTTTATGGTGAGCGGCAGTGGATTGTGCTGC
CACCTGCCGGATAGGCAGTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQEPELDEINIRILEALQRDASLTNVELAARVNLSPSPCLARVRALEQRGIIRQRVTLLDPQKLGLNVNVFIHVSLERQA
REGLDAFERAVRALPNVMECYLMTGDADYLIRAVVADVQAVERLIVDEITRIPGVANIRSSFALKQVMYDTALPLRNPR

Sequences:

>Translated_159_residues
MQEPELDEINIRILEALQRDASLTNVELAARVNLSPSPCLARVRALEQRGIIRQRVTLLDPQKLGLNVNVFIHVSLERQA
REGLDAFERAVRALPNVMECYLMTGDADYLIRAVVADVQAVERLIVDEITRIPGVANIRSSFALKQVMYDTALPLRNPR
>Mature_159_residues
MQEPELDEINIRILEALQRDASLTNVELAARVNLSPSPCLARVRALEQRGIIRQRVTLLDPQKLGLNVNVFIHVSLERQA
REGLDAFERAVRALPNVMECYLMTGDADYLIRAVVADVQAVERLIVDEITRIPGVANIRSSFALKQVMYDTALPLRNPR

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=40.5594405594406, Blast_Score=121, Evalue=2e-29,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=36, Blast_Score=116, Evalue=7e-28,
Organism=Escherichia coli, GI1790182, Length=154, Percent_Identity=26.6233766233766, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17914; Mature: 17914

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEPELDEINIRILEALQRDASLTNVELAARVNLSPSPCLARVRALEQRGIIRQRVTLLD
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
PQKLGLNVNVFIHVSLERQAREGLDAFERAVRALPNVMECYLMTGDADYLIRAVVADVQA
HHHHCCEEEEEEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH
VERLIVDEITRIPGVANIRSSFALKQVMYDTALPLRNPR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQEPELDEINIRILEALQRDASLTNVELAARVNLSPSPCLARVRALEQRGIIRQRVTLLD
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
PQKLGLNVNVFIHVSLERQAREGLDAFERAVRALPNVMECYLMTGDADYLIRAVVADVQA
HHHHCCEEEEEEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH
VERLIVDEITRIPGVANIRSSFALKQVMYDTALPLRNPR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]