Click here to switch to the map view.

The map label for this gene is yqjH [H]

Identifier: 116695129

GI number: 116695129

Start: 1338760

End: 1339587

Strand: Direct

Name: yqjH [H]

Synonym: H16_B1184

Alternate gene names: 116695129

Gene position: 1338760-1339587 (Clockwise)

Preceding gene: 116695128

Following gene: 116695130

Centisome position: 45.97

GC content: 68.12

Gene sequence:

>828_bases
ATGAGTGAGAACAATCAAGCCTCCGCACGCGACCTGACTGTGCAGCGCGTGCGCCATCCGCTCAAGATGCGCCTGCTGCA
AGTGGTGCGCACCACGCAAGTGTCACCGCAGTTGCTGCGTGTCACGCTTGGCGGCGCTGATCTGCAGGACTTTGTCTCGG
CGTCGTTCGACGACCACGTCAAGGTCTTCTTCCCGGTGGACGGCGCTGACAAGCCGGTGCTGCCGCAGGTCACCCCGGAC
GGCATCACCTTCCCCGAAGGCCAGCCGCGGCCGCCCGCGCGCGACTACACGCCGCGCCGCTACGATGGGGCGAAGCAGGA
GCTGGATATCGAGTTCGTGCTGCATGGCGATGGCCCCGCGTCGACCTGGGCCGCGCAGGCGCAGCCGGGCCAGTACCTGG
GCGTGGGCGGGCCGCGCGGCTCGTTCGTGGTGCCCACGGCGTTCGACTGGCACCTGCTGATCGGCGACGATACCGCGCTG
CCGGCGATCGCCCGGCGCCTGGAAGAGCTCGGGGCCGATACGCGCGCCATCGTGGTGGTGGAAGTGGGCAATGCCGCGTC
GCAGATTCCTCTGCCGACGCAGGCGCAATGCGATGTGCACTGGCTGCATCGTGACGATGCGCTGGAAGGCAGCCTGCTGG
AAGGGGTGCTACGCAAGCTCACGCTGCCGCGCGGCGAGGGTTATGTGTGGGCCGCTGGTGAAGCCGCGGCGATGAAAGCG
GTGCGCCAGTACCTGGTCAGCGAACGCGGTGTCGACAAGCGCCGTATCCGCGCGTCGGCGTACTGGAAGCGTGGCGCTTC
GGCGGTGCATGAGACGCTGGACGACTGA

Upstream 100 bases:

>100_bases
CGAAGCGGTGCGCAAGGCCTGACATGTGGCACTGACGCTGGCTGCGGCCATCGGCAACCTGACCCGGCAGGTGCCGGGTT
CTATCCCAAGGAATTCCAAT

Downstream 100 bases:

>100_bases
AGCGGGCGGGGTGCCGGTAAGATAGTGCGACCGCCATCCGCCAGGGAGACCCTGCCGTGCAGCCTTCGCCCACCTTTCGC
CGCTTCACGATCAGCCGGCG

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSENNQASARDLTVQRVRHPLKMRLLQVVRTTQVSPQLLRVTLGGADLQDFVSASFDDHVKVFFPVDGADKPVLPQVTPD
GITFPEGQPRPPARDYTPRRYDGAKQELDIEFVLHGDGPASTWAAQAQPGQYLGVGGPRGSFVVPTAFDWHLLIGDDTAL
PAIARRLEELGADTRAIVVVEVGNAASQIPLPTQAQCDVHWLHRDDALEGSLLEGVLRKLTLPRGEGYVWAAGEAAAMKA
VRQYLVSERGVDKRRIRASAYWKRGASAVHETLDD

Sequences:

>Translated_275_residues
MSENNQASARDLTVQRVRHPLKMRLLQVVRTTQVSPQLLRVTLGGADLQDFVSASFDDHVKVFFPVDGADKPVLPQVTPD
GITFPEGQPRPPARDYTPRRYDGAKQELDIEFVLHGDGPASTWAAQAQPGQYLGVGGPRGSFVVPTAFDWHLLIGDDTAL
PAIARRLEELGADTRAIVVVEVGNAASQIPLPTQAQCDVHWLHRDDALEGSLLEGVLRKLTLPRGEGYVWAAGEAAAMKA
VRQYLVSERGVDKRRIRASAYWKRGASAVHETLDD
>Mature_274_residues
SENNQASARDLTVQRVRHPLKMRLLQVVRTTQVSPQLLRVTLGGADLQDFVSASFDDHVKVFFPVDGADKPVLPQVTPDG
ITFPEGQPRPPARDYTPRRYDGAKQELDIEFVLHGDGPASTWAAQAQPGQYLGVGGPRGSFVVPTAFDWHLLIGDDTALP
AIARRLEELGADTRAIVVVEVGNAASQIPLPTQAQCDVHWLHRDDALEGSLLEGVLRKLTLPRGEGYVWAAGEAAAMKAV
RQYLVSERGVDKRRIRASAYWKRGASAVHETLDD

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=251, Percent_Identity=40.6374501992032, Blast_Score=174, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 30128; Mature: 29997

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENNQASARDLTVQRVRHPLKMRLLQVVRTTQVSPQLLRVTLGGADLQDFVSASFDDHV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCE
KVFFPVDGADKPVLPQVTPDGITFPEGQPRPPARDYTPRRYDGAKQELDIEFVLHGDGPA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
STWAAQAQPGQYLGVGGPRGSFVVPTAFDWHLLIGDDTALPAIARRLEELGADTRAIVVV
CCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
EVGNAASQIPLPTQAQCDVHWLHRDDALEGSLLEGVLRKLTLPRGEGYVWAAGEAAAMKA
EECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
VRQYLVSERGVDKRRIRASAYWKRGASAVHETLDD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SENNQASARDLTVQRVRHPLKMRLLQVVRTTQVSPQLLRVTLGGADLQDFVSASFDDHV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCE
KVFFPVDGADKPVLPQVTPDGITFPEGQPRPPARDYTPRRYDGAKQELDIEFVLHGDGPA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
STWAAQAQPGQYLGVGGPRGSFVVPTAFDWHLLIGDDTALPAIARRLEELGADTRAIVVV
CCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
EVGNAASQIPLPTQAQCDVHWLHRDDALEGSLLEGVLRKLTLPRGEGYVWAAGEAAAMKA
EECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
VRQYLVSERGVDKRRIRASAYWKRGASAVHETLDD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]