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The map label for this gene is yqjI [H]

Identifier: 116695128

GI number: 116695128

Start: 1338028

End: 1338681

Strand: Direct

Name: yqjI [H]

Synonym: H16_B1183

Alternate gene names: 116695128

Gene position: 1338028-1338681 (Clockwise)

Preceding gene: 116695127

Following gene: 116695129

Centisome position: 45.94

GC content: 68.65

Gene sequence:

>654_bases
ATGCGCCTTTTGCCTCACTTTGAGCGCCACTTCGCCCACCACGCCATGGGCCGCCACGGCGGCGGCTTCTGGGGCGGCGG
GCATGACGACGGCTTCGGCCCTGCCGGCGCCGATGGTCCCGGCAGCTTCGACGGCGAAGGCTGGCGCCGGGGCCGCAAGT
TCAGCGCCGATGACCTGCAGTTGCTGCTGCTGGCGATGCTCGAAGAGAAGCCGAGCCACGGCTACGAACTGATCAAGGCG
ATCGAGACCCGTACCAACGGCTTCTACAAGCCGAGTCCCGGCGTGGTCTATCCGGCCCTGACTTACCTGGAAGAAGTCGG
CTACGCCACCGTCGATACGGAAGGCAACAAGAAGCGCTACCAGCTGTCCGAGACCGGCAAGGCCCACCTGGCGGCCAACC
GCGAGCGGGTCGAGGTGATGATTGCCAAGCTGCGCCACGTGGCGCGCAAGGTTGAGTGGATGCGGCGCGCCATGAGCGGT
GAGCCGCAGCCCGAGCCGGAGCAGGGCGGCTGGCTGCCCGAGCTGATGCAAGCCCGCGCCGCGATCAAGCGTGCCATTGC
GCTGCGCAGCGATGCGGGCGCCGACGAGCAGCGCCGCATCGCGGAGATCCTGCTGCGCGCGGCGGCCGAGATCGAAGCGG
TGCGCAAGGCCTGA

Upstream 100 bases:

>100_bases
ACGATATATATCGTAAGATATGTTTTACGACATATCGGAGGCAGTCATGCGCCATCATTCCCACCCTTTTGGCTCCTCAG
GCCACGGCCGTCACCTGCTG

Downstream 100 bases:

>100_bases
CATGTGGCACTGACGCTGGCTGCGGCCATCGGCAACCTGACCCGGCAGGTGCCGGGTTCTATCCCAAGGAATTCCAATAT
GAGTGAGAACAATCAAGCCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MRLLPHFERHFAHHAMGRHGGGFWGGGHDDGFGPAGADGPGSFDGEGWRRGRKFSADDLQLLLLAMLEEKPSHGYELIKA
IETRTNGFYKPSPGVVYPALTYLEEVGYATVDTEGNKKRYQLSETGKAHLAANRERVEVMIAKLRHVARKVEWMRRAMSG
EPQPEPEQGGWLPELMQARAAIKRAIALRSDAGADEQRRIAEILLRAAAEIEAVRKA

Sequences:

>Translated_217_residues
MRLLPHFERHFAHHAMGRHGGGFWGGGHDDGFGPAGADGPGSFDGEGWRRGRKFSADDLQLLLLAMLEEKPSHGYELIKA
IETRTNGFYKPSPGVVYPALTYLEEVGYATVDTEGNKKRYQLSETGKAHLAANRERVEVMIAKLRHVARKVEWMRRAMSG
EPQPEPEQGGWLPELMQARAAIKRAIALRSDAGADEQRRIAEILLRAAAEIEAVRKA
>Mature_217_residues
MRLLPHFERHFAHHAMGRHGGGFWGGGHDDGFGPAGADGPGSFDGEGWRRGRKFSADDLQLLLLAMLEEKPSHGYELIKA
IETRTNGFYKPSPGVVYPALTYLEEVGYATVDTEGNKKRYQLSETGKAHLAANRERVEVMIAKLRHVARKVEWMRRAMSG
EPQPEPEQGGWLPELMQARAAIKRAIALRSDAGADEQRRIAEILLRAAAEIEAVRKA

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=158, Percent_Identity=36.7088607594937, Blast_Score=87, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 24122; Mature: 24122

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPHFERHFAHHAMGRHGGGFWGGGHDDGFGPAGADGPGSFDGEGWRRGRKFSADDLQ
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHH
LLLLAMLEEKPSHGYELIKAIETRTNGFYKPSPGVVYPALTYLEEVGYATVDTEGNKKRY
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEE
QLSETGKAHLAANRERVEVMIAKLRHVARKVEWMRRAMSGEPQPEPEQGGWLPELMQARA
ECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AIKRAIALRSDAGADEQRRIAEILLRAAAEIEAVRKA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLLPHFERHFAHHAMGRHGGGFWGGGHDDGFGPAGADGPGSFDGEGWRRGRKFSADDLQ
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHH
LLLLAMLEEKPSHGYELIKAIETRTNGFYKPSPGVVYPALTYLEEVGYATVDTEGNKKRY
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEE
QLSETGKAHLAANRERVEVMIAKLRHVARKVEWMRRAMSGEPQPEPEQGGWLPELMQARA
ECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AIKRAIALRSDAGADEQRRIAEILLRAAAEIEAVRKA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]