Click here to switch to the map view.

The map label for this gene is cyoA3 [H]

Identifier: 116694970

GI number: 116694970

Start: 1157706

End: 1158755

Strand: Direct

Name: cyoA3 [H]

Synonym: H16_B1025

Alternate gene names: 116694970

Gene position: 1157706-1158755 (Clockwise)

Preceding gene: 116694966

Following gene: 116694971

Centisome position: 39.75

GC content: 65.43

Gene sequence:

>1050_bases
ATGGGCCGCTTCGACTCTGTAGTGCCGCCAAGACGTGTGCAGGGAAGACTACTGCTGCGATGTGCCGCCGCAGTCATGCT
GGCGTGCCTGGCCGGTTGTAACGCAGTGCTGCTTGCGCCATCCGGCGACATGGCCCTGCGCCAGCGCGACCTGATCATCA
TTGCCACCTGCCTGATGTTGCTGATCATCGTTCCGGTGATCATCCTCACGCTGCTGTTTGCGTGGCGCTATCGGGAAAGT
GCGACCGATGCGCCCTACAACCCCGACTGGGACCATTCCACTGTGCTCGAGCTGGCGATCTGGGCCGCGCCGCTGCTGAT
CATCATCGCGCTGGGCGCCGTGACCTGGGTCAGCACCCACCAGCTCGATCCGTACCGGCCGCTGACGCGGATCGACGCAG
GCCGGCCGGTCCCGGCAGACGTGAAGCCGCTGACGGTGGAGGTGGTGGCGATGGACTGGAAGTGGCTGTTCCTGTATCCC
GAGCAGGGCATCGCCACCGTCAACGAGCTGGCGGCGCCGGTCGACCGGCCCATCGCTTTCCGCATCACCGCCACCTCGGT
GATGAACGCATTCTTCGTCCCGTCGCTGGCGGGCATGGTCTACGCCATGCCCGGCATGGAAACCAAGCTGCATGCCGTGA
TCAACAAGTCCGGCGTGTATGAAGGCTTCTCGGCCAACTACAGCGGCGCGGGCTTCTCCCACATGCGTTTCAAGTTCCAT
GGGCTGTCCAACCAGGACTTCGAGAGCTGGATCCAGCAGGTCAAGTCGTCGGGCCAGGGCCTGTCCACGGATACGTACCT
CAAGCTCGCGCAGCCCAGCGAGCGCGACGCGGTGCAACGCTATGCCAGCGTGGCGCCAGGCCTCTACGACCTGATCCTGA
ACCGTTGCGTGGGCGGCGGGCGGTGCATGGCAGACACCATGGCGCTTGACCGCAGCCGCGGCAAATTCGACCCGTTCGCC
GGCATCTGCACGGCGCGCAACACCGCGGCCACAGCGCCCGTGTTCGCGTCGGAGTCCGCGCGCAATGACGGCCGGGTGCT
GCTGCAGTAA

Upstream 100 bases:

>100_bases
GTCTCGCACTGACAAGAATAGCGCCTAAACTGCCATAGAAAAACGAAAGGTGAGTTCGCCGGCAGTTTGCCGATATTCCT
CAGACGCCACTTCCGAGACT

Downstream 100 bases:

>100_bases
GGTGCGGATCCGGATCTTCCCTTGCGGTACTGGCCAGCCCCATCGGCCATGGTTGGTTAATTCAGGCCCCAGGTGACAAA
CATGCCCGAGCGCTCGGAAC

Product: bo3-type chinol oxidase

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MGRFDSVVPPRRVQGRLLLRCAAAVMLACLAGCNAVLLAPSGDMALRQRDLIIIATCLMLLIIVPVIILTLLFAWRYRES
ATDAPYNPDWDHSTVLELAIWAAPLLIIIALGAVTWVSTHQLDPYRPLTRIDAGRPVPADVKPLTVEVVAMDWKWLFLYP
EQGIATVNELAAPVDRPIAFRITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKSGVYEGFSANYSGAGFSHMRFKFH
GLSNQDFESWIQQVKSSGQGLSTDTYLKLAQPSERDAVQRYASVAPGLYDLILNRCVGGGRCMADTMALDRSRGKFDPFA
GICTARNTAATAPVFASESARNDGRVLLQ

Sequences:

>Translated_349_residues
MGRFDSVVPPRRVQGRLLLRCAAAVMLACLAGCNAVLLAPSGDMALRQRDLIIIATCLMLLIIVPVIILTLLFAWRYRES
ATDAPYNPDWDHSTVLELAIWAAPLLIIIALGAVTWVSTHQLDPYRPLTRIDAGRPVPADVKPLTVEVVAMDWKWLFLYP
EQGIATVNELAAPVDRPIAFRITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKSGVYEGFSANYSGAGFSHMRFKFH
GLSNQDFESWIQQVKSSGQGLSTDTYLKLAQPSERDAVQRYASVAPGLYDLILNRCVGGGRCMADTMALDRSRGKFDPFA
GICTARNTAATAPVFASESARNDGRVLLQ
>Mature_348_residues
GRFDSVVPPRRVQGRLLLRCAAAVMLACLAGCNAVLLAPSGDMALRQRDLIIIATCLMLLIIVPVIILTLLFAWRYRESA
TDAPYNPDWDHSTVLELAIWAAPLLIIIALGAVTWVSTHQLDPYRPLTRIDAGRPVPADVKPLTVEVVAMDWKWLFLYPE
QGIATVNELAAPVDRPIAFRITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKSGVYEGFSANYSGAGFSHMRFKFHG
LSNQDFESWIQQVKSSGQGLSTDTYLKLAQPSERDAVQRYASVAPGLYDLILNRCVGGGRCMADTMALDRSRGKFDPFAG
ICTARNTAATAPVFASESARNDGRVLLQ

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=278, Percent_Identity=45.6834532374101, Blast_Score=279, Evalue=2e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 38152; Mature: 38021

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFDSVVPPRRVQGRLLLRCAAAVMLACLAGCNAVLLAPSGDMALRQRDLIIIATCLML
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHH
LIIVPVIILTLLFAWRYRESATDAPYNPDWDHSTVLELAIWAAPLLIIIALGAVTWVSTH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLDPYRPLTRIDAGRPVPADVKPLTVEVVAMDWKWLFLYPEQGIATVNELAAPVDRPIAF
CCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHCCCCCCEEE
RITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKSGVYEGFSANYSGAGFSHMRFKFH
EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE
GLSNQDFESWIQQVKSSGQGLSTDTYLKLAQPSERDAVQRYASVAPGLYDLILNRCVGGG
CCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
RCMADTMALDRSRGKFDPFAGICTARNTAATAPVFASESARNDGRVLLQ
CHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCEEEC
>Mature Secondary Structure 
GRFDSVVPPRRVQGRLLLRCAAAVMLACLAGCNAVLLAPSGDMALRQRDLIIIATCLML
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHH
LIIVPVIILTLLFAWRYRESATDAPYNPDWDHSTVLELAIWAAPLLIIIALGAVTWVSTH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLDPYRPLTRIDAGRPVPADVKPLTVEVVAMDWKWLFLYPEQGIATVNELAAPVDRPIAF
CCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHCCCCCCEEE
RITATSVMNAFFVPSLAGMVYAMPGMETKLHAVINKSGVYEGFSANYSGAGFSHMRFKFH
EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE
GLSNQDFESWIQQVKSSGQGLSTDTYLKLAQPSERDAVQRYASVAPGLYDLILNRCVGGG
CCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
RCMADTMALDRSRGKFDPFAGICTARNTAATAPVFASESARNDGRVLLQ
CHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]