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The map label for this gene is farR [C]

Identifier: 116694934

GI number: 116694934

Start: 1115787

End: 1116614

Strand: Direct

Name: farR [C]

Synonym: H16_B0989

Alternate gene names: 116694934

Gene position: 1115787-1116614 (Clockwise)

Preceding gene: 116694933

Following gene: 116694935

Centisome position: 38.31

GC content: 67.75

Gene sequence:

>828_bases
ATGACACGCGCCAGCGCCAAGGTCGCAGCCAATGGCGGCATCGCGCTGGCCGACGATAACGCCGGCGGCGTGACCCGCTA
CCGGCAACTGGCAAGCGTGCTGCGCCACAAGATCGTCGCCGGCGAGTATCCGGTCGGGTTCCAGCTGCCCACGGTCGAGC
ACCTGGCGCAGGCGTACGGCCTTGCCAAGGTCACCGTGCGGCAGGCCTTTGCCTTGCTGACCGAGGAAGGGCTGATCAGC
AGCCAGCGCGGGCGCGGCACGCACGTCATCATGGTGCCGTCCGGCCCGGGCGAAGGCATGCGCTCGGCCATCAACGATGT
CTCGGTTGGCGCCAGCGGCCTCGAGATCCGCATCCTGGAAAAGCGCAAGAACATGGCCCTGCCGCCCGGCCTTGCCACCT
GCGGCGCGCCGATGGACCGCTACGTGATGCTGCGCAAGCTGCACGTGCATGACGGGATGCCGTTCTGCCTGATCGAGCTG
TATGTGGCCGACGCGGTGTTCGCCAGGTTCCCGCGCGGCGCTGAGAAGCATCACAAGATTGCCCACTTGCTGCGGGAGCA
GCTGGGCGACCGGCTTGGCACGATGCGCCAGACCATGACCGTTGAGCCGGCCGACGCCATGCTGGCGCGCGACCTGGACT
ATGCCTTCGCGGCACCGGTCGCGCGCATTGTCCGTACCACGCTGGATATCGACGGCAACGTGCTCACGGCGGGCCGCTTC
TGGTACCGCGGCGACCGCTTCATCCTCGACGTGGAGATGCCCGCGCAGCTTACCGAGCGCTACCCCGAACTGGCCGTGCC
GAAAGCTGCTGCCCGGCAAGACGACTAA

Upstream 100 bases:

>100_bases
ATGGCGGCGGCATGGCATCGCTGCGCAATGACCCGCTAGGCAAGGGGATGGCGCAGATCCTGCTGACGATGCCGGTGCGC
GTGCCGCGGAGCCTGCTGTC

Downstream 100 bases:

>100_bases
CCAGGAGACAACGCATGACATCGCAATTCGTACGACGCGCCGCCGATGTGCCCGCCTATTCCCCGGCCAACCATACCGGA
ACCGCCAACCAGCGCGTGAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator; GntR Family Regulatory Protein; Transcriptional Regulator GntRUbiC Family

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTRASAKVAANGGIALADDNAGGVTRYRQLASVLRHKIVAGEYPVGFQLPTVEHLAQAYGLAKVTVRQAFALLTEEGLIS
SQRGRGTHVIMVPSGPGEGMRSAINDVSVGASGLEIRILEKRKNMALPPGLATCGAPMDRYVMLRKLHVHDGMPFCLIEL
YVADAVFARFPRGAEKHHKIAHLLREQLGDRLGTMRQTMTVEPADAMLARDLDYAFAAPVARIVRTTLDIDGNVLTAGRF
WYRGDRFILDVEMPAQLTERYPELAVPKAAARQDD

Sequences:

>Translated_275_residues
MTRASAKVAANGGIALADDNAGGVTRYRQLASVLRHKIVAGEYPVGFQLPTVEHLAQAYGLAKVTVRQAFALLTEEGLIS
SQRGRGTHVIMVPSGPGEGMRSAINDVSVGASGLEIRILEKRKNMALPPGLATCGAPMDRYVMLRKLHVHDGMPFCLIEL
YVADAVFARFPRGAEKHHKIAHLLREQLGDRLGTMRQTMTVEPADAMLARDLDYAFAAPVARIVRTTLDIDGNVLTAGRF
WYRGDRFILDVEMPAQLTERYPELAVPKAAARQDD
>Mature_274_residues
TRASAKVAANGGIALADDNAGGVTRYRQLASVLRHKIVAGEYPVGFQLPTVEHLAQAYGLAKVTVRQAFALLTEEGLISS
QRGRGTHVIMVPSGPGEGMRSAINDVSVGASGLEIRILEKRKNMALPPGLATCGAPMDRYVMLRKLHVHDGMPFCLIELY
VADAVFARFPRGAEKHHKIAHLLREQLGDRLGTMRQTMTVEPADAMLARDLDYAFAAPVARIVRTTLDIDGNVLTAGRFW
YRGDRFILDVEMPAQLTERYPELAVPKAAARQDD

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30043; Mature: 29912

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRASAKVAANGGIALADDNAGGVTRYRQLASVLRHKIVAGEYPVGFQLPTVEHLAQAYG
CCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
LAKVTVRQAFALLTEEGLISSQRGRGTHVIMVPSGPGEGMRSAINDVSVGASGLEIRILE
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEE
KRKNMALPPGLATCGAPMDRYVMLRKLHVHDGMPFCLIELYVADAVFARFPRGAEKHHKI
CCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
AHLLREQLGDRLGTMRQTMTVEPADAMLARDLDYAFAAPVARIVRTTLDIDGNVLTAGRF
HHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCE
WYRGDRFILDVEMPAQLTERYPELAVPKAAARQDD
EEECCEEEEEECCCHHHHHCCCCCCCCCHHCCCCC
>Mature Secondary Structure 
TRASAKVAANGGIALADDNAGGVTRYRQLASVLRHKIVAGEYPVGFQLPTVEHLAQAYG
CCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
LAKVTVRQAFALLTEEGLISSQRGRGTHVIMVPSGPGEGMRSAINDVSVGASGLEIRILE
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEE
KRKNMALPPGLATCGAPMDRYVMLRKLHVHDGMPFCLIELYVADAVFARFPRGAEKHHKI
CCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
AHLLREQLGDRLGTMRQTMTVEPADAMLARDLDYAFAAPVARIVRTTLDIDGNVLTAGRF
HHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCE
WYRGDRFILDVEMPAQLTERYPELAVPKAAARQDD
EEECCEEEEEECCCHHHHHCCCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA