| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694935
Identifier: 116694935
GI number: 116694935
Start: 1116629
End: 1117390
Strand: Direct
Name: 116694935
Synonym: H16_B0990
Alternate gene names: NA
Gene position: 1116629-1117390 (Clockwise)
Preceding gene: 116694934
Following gene: 116694936
Centisome position: 38.34
GC content: 68.24
Gene sequence:
>762_bases ATGACATCGCAATTCGTACGACGCGCCGCCGATGTGCCCGCCTATTCCCCGGCCAACCATACCGGAACCGCCAACCAGCG CGTGATCGGCAGGGAGACGGTCGGCGCGCGGCGCATCGAAGTGCTGTTGGGCACGATTTCTCGCGGCCATGGCGCCTTGC CCCATGCGCATCCGAACCTGGAGCAGGCGTCCTACCTGCTGGCGGGCGAGGGCATCGGCGAGGTCGCCGGCAGGGCGCGC ACCCTGCGTGCGGGCGACTGGGGTTTCAATCCGATGGGCGTATTCCACCGCTTCGAGGTCGTCAGCGACGAGCCGGTGCA GGTCATGGTGGTGTACGCCCCACCGTACAGCGAAAACCCGAACGCGGCCGTGGTGGCCAGCGCAGCGGATGATCCCCGCA GCAGCGCGCAGGCGGACAGCCTGCGCGAGGTGCCGATGCATGAGGCGGCCCAAAGCCTGCCTCACTACCATCGCGTCCGT GCCAGACCCGTGATTACGCGCGACACGGTCGGCGCTCGGCATCTGGATATTCGCGCACTGGAGCTCGAAGCCACGGGCGG TGCCGAAGCGCACTCGGTGGCGGCGACTGAGCAGGTGCTGTTCCTGCAGTCGGGTTCGGTCAGCGGCGAGATCAACGACC AGCAGTTCACCGCGACGTCGGGGGACTGGGTCTTTGTGCCGGAGGGCGGCACTTTCAGCTTTGCGGCGCAAGGTGGCCCG TGCGAGGCCATCCTGGTGCGGGCGCACGACGCGGTGCCCTGA
Upstream 100 bases:
>100_bases TCCTCGACGTGGAGATGCCCGCGCAGCTTACCGAGCGCTACCCCGAACTGGCCGTGCCGAAAGCTGCTGCCCGGCAAGAC GACTAACCAGGAGACAACGC
Downstream 100 bases:
>100_bases ATCCGGCCCGCGCAGGGCCCAGACAATGAACAGATGCCAAAGGCACGAGGAGACAGACCATGATTCATCCATGCATGCGT AAAGTGGCCATCGGGCTGCT
Product: putative mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Domain-Containing; Mannose-6-Phosphate Isomerase; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTSQFVRRAADVPAYSPANHTGTANQRVIGRETVGARRIEVLLGTISRGHGALPHAHPNLEQASYLLAGEGIGEVAGRAR TLRAGDWGFNPMGVFHRFEVVSDEPVQVMVVYAPPYSENPNAAVVASAADDPRSSAQADSLREVPMHEAAQSLPHYHRVR ARPVITRDTVGARHLDIRALELEATGGAEAHSVAATEQVLFLQSGSVSGEINDQQFTATSGDWVFVPEGGTFSFAAQGGP CEAILVRAHDAVP
Sequences:
>Translated_253_residues MTSQFVRRAADVPAYSPANHTGTANQRVIGRETVGARRIEVLLGTISRGHGALPHAHPNLEQASYLLAGEGIGEVAGRAR TLRAGDWGFNPMGVFHRFEVVSDEPVQVMVVYAPPYSENPNAAVVASAADDPRSSAQADSLREVPMHEAAQSLPHYHRVR ARPVITRDTVGARHLDIRALELEATGGAEAHSVAATEQVLFLQSGSVSGEINDQQFTATSGDWVFVPEGGTFSFAAQGGP CEAILVRAHDAVP >Mature_252_residues TSQFVRRAADVPAYSPANHTGTANQRVIGRETVGARRIEVLLGTISRGHGALPHAHPNLEQASYLLAGEGIGEVAGRART LRAGDWGFNPMGVFHRFEVVSDEPVQVMVVYAPPYSENPNAAVVASAADDPRSSAQADSLREVPMHEAAQSLPHYHRVRA RPVITRDTVGARHLDIRALELEATGGAEAHSVAATEQVLFLQSGSVSGEINDQQFTATSGDWVFVPEGGTFSFAAQGGPC EAILVRAHDAVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26931; Mature: 26800
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQFVRRAADVPAYSPANHTGTANQRVIGRETVGARRIEVLLGTISRGHGALPHAHPNL CCHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCHHEEEEEEEHHCCCCCCCCCCCCCH EQASYLLAGEGIGEVAGRARTLRAGDWGFNPMGVFHRFEVVSDEPVQVMVVYAPPYSENP HHHEEEEECCCHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC NAAVVASAADDPRSSAQADSLREVPMHEAAQSLPHYHRVRARPVITRDTVGARHLDIRAL CEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHCCCEEEECCCCCEEEEEEEE ELEATGGAEAHSVAATEQVLFLQSGSVSGEINDQQFTATSGDWVFVPEGGTFSFAAQGGP EEECCCCCCHHHHHHHEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCC CEAILVRAHDAVP EEEEEEEECCCCC >Mature Secondary Structure TSQFVRRAADVPAYSPANHTGTANQRVIGRETVGARRIEVLLGTISRGHGALPHAHPNL CHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCHHEEEEEEEHHCCCCCCCCCCCCCH EQASYLLAGEGIGEVAGRARTLRAGDWGFNPMGVFHRFEVVSDEPVQVMVVYAPPYSENP HHHEEEEECCCHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC NAAVVASAADDPRSSAQADSLREVPMHEAAQSLPHYHRVRARPVITRDTVGARHLDIRAL CEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHCCCEEEECCCCCEEEEEEEE ELEATGGAEAHSVAATEQVLFLQSGSVSGEINDQQFTATSGDWVFVPEGGTFSFAAQGGP EEECCCCCCHHHHHHHEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCC CEAILVRAHDAVP EEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA