| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is ilvA [H]
Identifier: 116694571
GI number: 116694571
Start: 691967
End: 692887
Strand: Direct
Name: ilvA [H]
Synonym: H16_B0620
Alternate gene names: 116694571
Gene position: 691967-692887 (Clockwise)
Preceding gene: 116694568
Following gene: 116694572
Centisome position: 23.76
GC content: 65.47
Gene sequence:
>921_bases ATGACGCTTCACATCAGCACACCTTTTGTACAGTCCCAGCCCAATTCGCGGCGGCTCGGCAAACCGGTCTGGCTAAAGAT GGAAGCCGCACAGCCGTCCGGGTCTTTCAAGCTTCGGGGTGTCGGAGCCTTGTGTGAAGCGCGGCACGCCGCGGGCGTAC AGCGATTCGTTGCATCTTCAGGCGGAAATGCCGGGCTTGCGGCAGCCTATTGCGGACGCGAACTCGGCGTTCCCGTGGTG GTGGTGGTACCGGAGAGCACACCATCGCGAGCGCGCGACCTGATCCGCCTGGAGGGCTCGGAGTTGATCGTGCGCGGAGG CACATGGGCGGAAGCGCACGAGTTTGCACTGTCCCTGATCGGGCCACGCGATGCCTTCGTGCACCCGTTCGACGATCCGC TCATCTGGCAGGGGCACGCCACGCTGGTGGACGAGATCGCGGCATCCGGGCCGAAGCCAGGCGCCATCGTTCTTGCCGTG GGCGGTGGTGGCCTGCTGTGCGGCGTGCTGGAGGGGCTTCAGCGGAATGGCTGGTCCGACGTGCCTGTGATCGCGGTAGA AACCGACGGTGCGGACTGCTACGCCCGCTCGGTTGCCGAAGGCAGGCCGGTCGAACTCGCACAGATCACCAGCGTGGCGA CGTCGCTTGGCGCCAGGCGGCCGTGTGATGGCGCGCTCCGATGGGCGCAGCGTCACGAGATCCACAGCGTCGTTGTGTCA GACAAACAGGCGGTGGAGGCAGCGATAAGGCTTCTTGACGAACACCGCGTCCTGGTTGAGCCGGCATGCGGCGCAGCCTT GGCGGCATTGGATTGCGACACCCCGGTGCTGCAGGCGGCGTCCAGCATTGCCGTGGTGGTATGTGGCGGGGCCACGGTGA CGGCACAGCAACTGCTTGACTTTGCTGCAAGGCTGGACTGA
Upstream 100 bases:
>100_bases GCTACCTAAATAACATTGGTTTGCATAGCTTCCTGCGACTACGATGGCGCAGCTTCCCGCGTTGCGGGGACGGCTCGCTT TCCACATTTCGCTACCAAAC
Downstream 100 bases:
>100_bases GCGGGCTTAAGGTAGCAATTTGGTAAGCTCGGCTACCCGCCGGCGAGATTCGCCCGAATTACCTGGTTCCGGGGATGCCC CTCACGGCCGATTTCTGTCA
Product: L-Serine dehydratase, putative
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTLHISTPFVQSQPNSRRLGKPVWLKMEAAQPSGSFKLRGVGALCEARHAAGVQRFVASSGGNAGLAAAYCGRELGVPVV VVVPESTPSRARDLIRLEGSELIVRGGTWAEAHEFALSLIGPRDAFVHPFDDPLIWQGHATLVDEIAASGPKPGAIVLAV GGGGLLCGVLEGLQRNGWSDVPVIAVETDGADCYARSVAEGRPVELAQITSVATSLGARRPCDGALRWAQRHEIHSVVVS DKQAVEAAIRLLDEHRVLVEPACGAALAALDCDTPVLQAASSIAVVVCGGATVTAQQLLDFAARLD
Sequences:
>Translated_306_residues MTLHISTPFVQSQPNSRRLGKPVWLKMEAAQPSGSFKLRGVGALCEARHAAGVQRFVASSGGNAGLAAAYCGRELGVPVV VVVPESTPSRARDLIRLEGSELIVRGGTWAEAHEFALSLIGPRDAFVHPFDDPLIWQGHATLVDEIAASGPKPGAIVLAV GGGGLLCGVLEGLQRNGWSDVPVIAVETDGADCYARSVAEGRPVELAQITSVATSLGARRPCDGALRWAQRHEIHSVVVS DKQAVEAAIRLLDEHRVLVEPACGAALAALDCDTPVLQAASSIAVVVCGGATVTAQQLLDFAARLD >Mature_305_residues TLHISTPFVQSQPNSRRLGKPVWLKMEAAQPSGSFKLRGVGALCEARHAAGVQRFVASSGGNAGLAAAYCGRELGVPVVV VVPESTPSRARDLIRLEGSELIVRGGTWAEAHEFALSLIGPRDAFVHPFDDPLIWQGHATLVDEIAASGPKPGAIVLAVG GGGLLCGVLEGLQRNGWSDVPVIAVETDGADCYARSVAEGRPVELAQITSVATSLGARRPCDGALRWAQRHEIHSVVVSD KQAVEAAIRLLDEHRVLVEPACGAALAALDCDTPVLQAASSIAVVVCGGATVTAQQLLDFAARLD
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI33469958, Length=314, Percent_Identity=46.1783439490446, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI19923959, Length=317, Percent_Identity=47.0031545741325, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI11345492, Length=282, Percent_Identity=25.531914893617, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1790207, Length=270, Percent_Identity=30.7407407407407, Blast_Score=94, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71991565, Length=295, Percent_Identity=27.1186440677966, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17537387, Length=150, Percent_Identity=34.6666666666667, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319788, Length=305, Percent_Identity=38.3606557377049, Blast_Score=205, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6322024, Length=203, Percent_Identity=36.9458128078818, Blast_Score=135, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320930, Length=296, Percent_Identity=28.0405405405405, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322023, Length=121, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI21355833, Length=288, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 31921; Mature: 31790
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHISTPFVQSQPNSRRLGKPVWLKMEAAQPSGSFKLRGVGALCEARHAAGVQRFVASS CEEEECCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC GGNAGLAAAYCGRELGVPVVVVVPESTPSRARDLIRLEGSELIVRGGTWAEAHEFALSLI CCCCCHHHHHCCHHCCCCEEEEECCCCCHHHHHHEEECCCEEEEECCCCHHHHHHHHHHC GPRDAFVHPFDDPLIWQGHATLVDEIAASGPKPGAIVLAVGGGGLLCGVLEGLQRNGWSD CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC VPVIAVETDGADCYARSVAEGRPVELAQITSVATSLGARRPCDGALRWAQRHEIHSVVVS CCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEC DKQAVEAAIRLLDEHRVLVEPACGAALAALDCDTPVLQAASSIAVVVCGGATVTAQQLLD CHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHCCCCEEEEEECCCHHHHHHHHH FAARLD HHHHCC >Mature Secondary Structure TLHISTPFVQSQPNSRRLGKPVWLKMEAAQPSGSFKLRGVGALCEARHAAGVQRFVASS EEEECCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC GGNAGLAAAYCGRELGVPVVVVVPESTPSRARDLIRLEGSELIVRGGTWAEAHEFALSLI CCCCCHHHHHCCHHCCCCEEEEECCCCCHHHHHHEEECCCEEEEECCCCHHHHHHHHHHC GPRDAFVHPFDDPLIWQGHATLVDEIAASGPKPGAIVLAVGGGGLLCGVLEGLQRNGWSD CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC VPVIAVETDGADCYARSVAEGRPVELAQITSVATSLGARRPCDGALRWAQRHEIHSVVVS CCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEC DKQAVEAAIRLLDEHRVLVEPACGAALAALDCDTPVLQAASSIAVVVCGGATVTAQQLLD CHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHCCCCEEEEEECCCHHHHHHHHH FAARLD HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]