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The map label for this gene is yybR [H]

Identifier: 116694403

GI number: 116694403

Start: 511576

End: 511959

Strand: Direct

Name: yybR [H]

Synonym: H16_B0452

Alternate gene names: 116694403

Gene position: 511576-511959 (Clockwise)

Preceding gene: 116694400

Following gene: 116694407

Centisome position: 17.56

GC content: 59.64

Gene sequence:

>384_bases
ATGAAGACGGCTGTGTCGGGATGTTCGGTAGAGGAAGCAATGCGCCTGCTGGGCGGCCGGTGGCGGCTGCTGATCGCCTC
GTACTTACTCGAAGGGCCGAAGCGTTTCAACGAACTGCGAAGAGAGATGCCAGACATTTCGCAGCGCATGCTCACCCTGG
ACCTGAAAGCACTTCAGGAAGTCGGCCTGGTGAAGAGAACAGCGTTTCCGACTGTTCCTGTTACGGTGCAGTACGAACTG
ACAGAGGATGGCGCGCGCCTTGCGCCTGTTGTGGAGGTGATGCGGGAGTTTGGGCTTTGGGTGAAGAGCCGGCCAAGGCC
ACCGCAGGCGCCAGAACCATATCCATTAGCCCACGAAAATCCGGCCGGCGGCGTCGTGCAATAG

Upstream 100 bases:

>100_bases
TGCTGATGGATCGAATGATGCTGAAGATGGTATAGAAAGGGAAGAAGGCACTAAAATGTGGTGTAGGTACATTTTTTATA
CCTATGACTGAGAGGCTTCC

Downstream 100 bases:

>100_bases
CAGAAGCGTCGTCATGGACGTGGCCATCAAGACAGGTTCTCATAAAGGGGGGCTTTGCCGACTACGCCGCCCCTGTGTGG
CAGTGAGTGCCGCGGCGCCG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKTAVSGCSVEEAMRLLGGRWRLLIASYLLEGPKRFNELRREMPDISQRMLTLDLKALQEVGLVKRTAFPTVPVTVQYEL
TEDGARLAPVVEVMREFGLWVKSRPRPPQAPEPYPLAHENPAGGVVQ

Sequences:

>Translated_127_residues
MKTAVSGCSVEEAMRLLGGRWRLLIASYLLEGPKRFNELRREMPDISQRMLTLDLKALQEVGLVKRTAFPTVPVTVQYEL
TEDGARLAPVVEVMREFGLWVKSRPRPPQAPEPYPLAHENPAGGVVQ
>Mature_127_residues
MKTAVSGCSVEEAMRLLGGRWRLLIASYLLEGPKRFNELRREMPDISQRMLTLDLKALQEVGLVKRTAFPTVPVTVQYEL
TEDGARLAPVVEVMREFGLWVKSRPRPPQAPEPYPLAHENPAGGVVQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=90, Percent_Identity=35.5555555555556, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14254; Mature: 14254

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAVSGCSVEEAMRLLGGRWRLLIASYLLEGPKRFNELRREMPDISQRMLTLDLKALQE
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
VGLVKRTAFPTVPVTVQYELTEDGARLAPVVEVMREFGLWVKSRPRPPQAPEPYPLAHEN
HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
PAGGVVQ
CCCCCCC
>Mature Secondary Structure
MKTAVSGCSVEEAMRLLGGRWRLLIASYLLEGPKRFNELRREMPDISQRMLTLDLKALQE
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
VGLVKRTAFPTVPVTVQYELTEDGARLAPVVEVMREFGLWVKSRPRPPQAPEPYPLAHEN
HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
PAGGVVQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]