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The map label for this gene is 116694385

Identifier: 116694385

GI number: 116694385

Start: 492567

End: 493121

Strand: Direct

Name: 116694385

Synonym: H16_B0433

Alternate gene names: NA

Gene position: 492567-493121 (Clockwise)

Preceding gene: 116694384

Following gene: 116694386

Centisome position: 16.91

GC content: 65.41

Gene sequence:

>555_bases
ATGCGCACAGCACGCTTGCTATCATGTAGTTCTATCGCGGCCCTTGCCACCCTCGTTGTGCCGGCGCTCTGCATCGCCAA
TGCCAACGCCGCCGAGCAGATCGTCAGGCATCGCAACCCGGCGCACATGACCGAACCGTGGGCGCGTGAGTTCGCGGAGG
TGATCGAGATTCCCGCCAATGCGCAGCTGCTTGTGCTCAGCGGCGTGGGGCCCACGGTGGCGAATGCCTCGGCGCCGCCC
GATACCGCGGCCTCCTATGGCGACACCGCAACCCAGACTCGCAGCGTGCTTGGCCAGATCGAGCGCATCCTCCAGGATCG
CGGCTATCGCATGGGCGACATCGTCTCCATGCAGGCGTTGATTGTGGCAGACCCGGCCACGGGCGAGCCAGACTTCACCG
GCTTCTCGAGCGCCTATAAGCAATACTTCGGAACAGACAAGCAGCCCAACGTGCCGGTGCGCACGCGAGCCGAAGTCTTG
CGGCTGGTGCCGCCGGGATGGCTAGTCGAAGTCACCGTCATGGCGAGCCGTGTGCCGTCGCGGCGGCCACAGTAG

Upstream 100 bases:

>100_bases
GCGAGCACGTTCTTCGCATATGCGTTCTTCGTTTTGTACGGTCCGGCAAGGCAACGCCGCGTTGTCCGGACCTTCATCCT
TTACTTCCCAGGCCCTGCCC

Downstream 100 bases:

>100_bases
AAGACATAGGCTAACTAGCGGTGTGCCGCAACCGGGAGGGCGGAGCTCGCGTGGCCGGGCGCAGGTAGTGGGACAGCGCA
CCTAACTCTCGCTGGAACAT

Product: translation initiation inhibitor

Products: NA

Alternate protein names: TdcF Protein; Translation Initiation Inhibitor; Endoribonuclease; Endoribonuclease L-PSP Family; Endonuclease L-PSP Endoribonuclease; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRTARLLSCSSIAALATLVVPALCIANANAAEQIVRHRNPAHMTEPWAREFAEVIEIPANAQLLVLSGVGPTVANASAPP
DTAASYGDTATQTRSVLGQIERILQDRGYRMGDIVSMQALIVADPATGEPDFTGFSSAYKQYFGTDKQPNVPVRTRAEVL
RLVPPGWLVEVTVMASRVPSRRPQ

Sequences:

>Translated_184_residues
MRTARLLSCSSIAALATLVVPALCIANANAAEQIVRHRNPAHMTEPWAREFAEVIEIPANAQLLVLSGVGPTVANASAPP
DTAASYGDTATQTRSVLGQIERILQDRGYRMGDIVSMQALIVADPATGEPDFTGFSSAYKQYFGTDKQPNVPVRTRAEVL
RLVPPGWLVEVTVMASRVPSRRPQ
>Mature_184_residues
MRTARLLSCSSIAALATLVVPALCIANANAAEQIVRHRNPAHMTEPWAREFAEVIEIPANAQLLVLSGVGPTVANASAPP
DTAASYGDTATQTRSVLGQIERILQDRGYRMGDIVSMQALIVADPATGEPDFTGFSSAYKQYFGTDKQPNVPVRTRAEVL
RLVPPGWLVEVTVMASRVPSRRPQ

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19795; Mature: 19795

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTARLLSCSSIAALATLVVPALCIANANAAEQIVRHRNPAHMTEPWAREFAEVIEIPAN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
AQLLVLSGVGPTVANASAPPDTAASYGDTATQTRSVLGQIERILQDRGYRMGDIVSMQAL
CEEEEEECCCCHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEE
IVADPATGEPDFTGFSSAYKQYFGTDKQPNVPVRTRAEVLRLVPPGWLVEVTVMASRVPS
EEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RRPQ
CCCC
>Mature Secondary Structure
MRTARLLSCSSIAALATLVVPALCIANANAAEQIVRHRNPAHMTEPWAREFAEVIEIPAN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
AQLLVLSGVGPTVANASAPPDTAASYGDTATQTRSVLGQIERILQDRGYRMGDIVSMQAL
CEEEEEECCCCHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEE
IVADPATGEPDFTGFSSAYKQYFGTDKQPNVPVRTRAEVLRLVPPGWLVEVTVMASRVPS
EEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RRPQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA