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The map label for this gene is tse [H]

Identifier: 116694188

GI number: 116694188

Start: 261086

End: 262945

Strand: Direct

Name: tse [H]

Synonym: H16_B0233

Alternate gene names: 116694188

Gene position: 261086-262945 (Clockwise)

Preceding gene: 116694187

Following gene: 116694189

Centisome position: 8.96

GC content: 69.09

Gene sequence:

>1860_bases
ATGCATTGGTTCAATCAATTGCGCGTCACGACCAGGCTGGTTGCCGGATTCCTGGTCGTTGCCGTGATCGGCGCCGTGAT
GGGGCTGCTGGGTGTGGTCAACATGGGGCGCATGGCCGACTGGACCGGCAAGATCTACAACGGCGACCTGCAGGCGCTGA
AGGCCGTGCAGGACGCCAATATCAACCTGGTCTATGCCAGCCGCGCGCAGATCGGGCTGCTGTCGGCATCGACCATGGGC
GAGCGGGCGGCCGAGAAGGAGCAGATCGTGAAGTCGCTCGGCGCCATGGACGAGCGCATCCGCCAGGTCGCTGGCGCTTT
CGAGAAGGCCGAGGGCAAGGCACTGGTCAAGCAGTACCAGGAGCTGTCGCCGGCGTTCCGCGCGCGCATGGAGAAGTACG
TCGAACTGATCAGCAAGCAGCCGCTGGATACCTCGCAGTTTGAAAGCCAGGTGTTTTCCGAGAGCGCCGAGCTGCTCAAG
GACAGCCATGCGCTGGAAGCGGTGATGTTCCAGATGGTCAAGCGCCGCGACGACCGCGCCCGCAACAACATGGAAGAAGC
GCGCAGCGTTTACGACGCGACGCGCCTGTGGATGCTGGGCCTGGTGCTGGGCGGCGTGGCGTTGTCGGTGCTGCTGGGCG
TGCTGCTGGCGCGGGCGCTGTCGCGCCAGCTGGGCGGCGAGCCGGGCTATGCCGCCGCGATTGCCGCGCGCATTGCCGAA
GGCGACTTCTCCGCACCGGTGGCCACGCGCGCAGGCGACAAGGGCAGCCTGGTCTATGCGATGCAGCAGATGCAGCAGCA
GCTGTCGCGCATGGTGCGCGATTTCAAGGTGTCGGCCGAATCCATCGGCAGCGCCTCGCGTGAAATCGCCGCGGGCAACA
ATGACCTGTCGCAACGCACCGAGCAGCAGGCGGCAGCCCTGGAGCAGACGGCGTCGAGCATGGAAGAGCTGACCAGCACG
GTGCGCCAGAACGCGGACAACGCGCGCCAGGCCAGCGGGCTGGCGGCGAACGCGTCGGAGACAGCGCTGCGCGGCGGCGA
AGTGGTGGGCCGGGTGGTGCAGACCATGGACGAGATCAACGATGCCTCGAAGAAGATCGTCGACATCATCGGCGTGATCG
AAGGCATCGCCTTCCAGACCAACATCCTGGCGCTGAACGCGGCGGTGGAAGCGGCGCGCGCCGGCGAGCAGGGCCGCGGC
TTCGCGGTGGTGGCGGGCGAGGTGCGCAGCCTGGCGCAGCGTAGCGCCAACGCGGCCAAGGAGATCAAGGGGCTGATCGG
CGATACGGTGGAGCGCGTGGACAACGGCTCGGCGCTGGTGGGCCAGGCGGGCAAGACCATGGAAGAGATCGTGCAGGCGG
TCAAGCGCGTGACCGACATCATGGGCGAGATCAGCGCGGCGTCGGCCGAGCAGAGCGCGGGCATCGAGCAGGTCAACCAG
GCCGTGGCGCAGATGGACGAGGGCACGCAGCAGAACGCGGCGCTGGTGGAAGAAGCCGCCGCCGCCGCAGGCGCGCTGGA
AGAGCAGGCCAGCCGGCTGCAGGGGGCCGTGGCGACGTTCCGCCTGGCGGCCGAGGATGCCCGCGCGGATTCGTTCGTGG
CCCACTCGCTGCCTGCGGCGACGGCAGTGCCGGCCAAGGTGTCTCGTGCCGCCGGCGCGGTGCGCGCCATCGCTGCCGGC
AAGCGGGTCGCCAAGGCCCTGCCCGCCAGCACGAAGGCCGCGGCTTTGCCTGCGGCGGACCATGCCGCCGCAGCCGAGGC
GGCAGATGCCGTCGCCACGCAGCCGGCGCGGCTGGTCGCAGGCAGAGCCTCGCGGCCCGCGCTGGCAGCCGCCGACAACG
GCGACTGGAGTGCGTTCTGA

Upstream 100 bases:

>100_bases
CCGAATCAAAGACGAGGCAGGCGCGGAGCACCGGCCTGCATGCGTACAAAACGGGTGCGGCACGCCGCGCCCGAGGCTTC
AGTTACAAGGGGGAGTTGCT

Downstream 100 bases:

>100_bases
TCCCCACTGGCAACGGGCCGCGCGGCGTCCCGGATGGCAAGGCTATGACGACCGAGATCAACCTGGCTCTGCCGCATGAC
GATGCGGCCCGTCTGCGCAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MHWFNQLRVTTRLVAGFLVVAVIGAVMGLLGVVNMGRMADWTGKIYNGDLQALKAVQDANINLVYASRAQIGLLSASTMG
ERAAEKEQIVKSLGAMDERIRQVAGAFEKAEGKALVKQYQELSPAFRARMEKYVELISKQPLDTSQFESQVFSESAELLK
DSHALEAVMFQMVKRRDDRARNNMEEARSVYDATRLWMLGLVLGGVALSVLLGVLLARALSRQLGGEPGYAAAIAARIAE
GDFSAPVATRAGDKGSLVYAMQQMQQQLSRMVRDFKVSAESIGSASREIAAGNNDLSQRTEQQAAALEQTASSMEELTST
VRQNADNARQASGLAANASETALRGGEVVGRVVQTMDEINDASKKIVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRG
FAVVAGEVRSLAQRSANAAKEIKGLIGDTVERVDNGSALVGQAGKTMEEIVQAVKRVTDIMGEISAASAEQSAGIEQVNQ
AVAQMDEGTQQNAALVEEAAAAAGALEEQASRLQGAVATFRLAAEDARADSFVAHSLPAATAVPAKVSRAAGAVRAIAAG
KRVAKALPASTKAAALPAADHAAAAEAADAVATQPARLVAGRASRPALAAADNGDWSAF

Sequences:

>Translated_619_residues
MHWFNQLRVTTRLVAGFLVVAVIGAVMGLLGVVNMGRMADWTGKIYNGDLQALKAVQDANINLVYASRAQIGLLSASTMG
ERAAEKEQIVKSLGAMDERIRQVAGAFEKAEGKALVKQYQELSPAFRARMEKYVELISKQPLDTSQFESQVFSESAELLK
DSHALEAVMFQMVKRRDDRARNNMEEARSVYDATRLWMLGLVLGGVALSVLLGVLLARALSRQLGGEPGYAAAIAARIAE
GDFSAPVATRAGDKGSLVYAMQQMQQQLSRMVRDFKVSAESIGSASREIAAGNNDLSQRTEQQAAALEQTASSMEELTST
VRQNADNARQASGLAANASETALRGGEVVGRVVQTMDEINDASKKIVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRG
FAVVAGEVRSLAQRSANAAKEIKGLIGDTVERVDNGSALVGQAGKTMEEIVQAVKRVTDIMGEISAASAEQSAGIEQVNQ
AVAQMDEGTQQNAALVEEAAAAAGALEEQASRLQGAVATFRLAAEDARADSFVAHSLPAATAVPAKVSRAAGAVRAIAAG
KRVAKALPASTKAAALPAADHAAAAEAADAVATQPARLVAGRASRPALAAADNGDWSAF
>Mature_619_residues
MHWFNQLRVTTRLVAGFLVVAVIGAVMGLLGVVNMGRMADWTGKIYNGDLQALKAVQDANINLVYASRAQIGLLSASTMG
ERAAEKEQIVKSLGAMDERIRQVAGAFEKAEGKALVKQYQELSPAFRARMEKYVELISKQPLDTSQFESQVFSESAELLK
DSHALEAVMFQMVKRRDDRARNNMEEARSVYDATRLWMLGLVLGGVALSVLLGVLLARALSRQLGGEPGYAAAIAARIAE
GDFSAPVATRAGDKGSLVYAMQQMQQQLSRMVRDFKVSAESIGSASREIAAGNNDLSQRTEQQAAALEQTASSMEELTST
VRQNADNARQASGLAANASETALRGGEVVGRVVQTMDEINDASKKIVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRG
FAVVAGEVRSLAQRSANAAKEIKGLIGDTVERVDNGSALVGQAGKTMEEIVQAVKRVTDIMGEISAASAEQSAGIEQVNQ
AVAQMDEGTQQNAALVEEAAAAAGALEEQASRLQGAVATFRLAAEDARADSFVAHSLPAATAVPAKVSRAAGAVRAIAAG
KRVAKALPASTKAAALPAADHAAAAEAADAVATQPARLVAGRASRPALAAADNGDWSAF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=292, Percent_Identity=65.4109589041096, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI2367378, Length=315, Percent_Identity=63.8095238095238, Blast_Score=317, Evalue=2e-87,
Organism=Escherichia coli, GI1787690, Length=460, Percent_Identity=45.8695652173913, Blast_Score=314, Evalue=1e-86,
Organism=Escherichia coli, GI1788194, Length=564, Percent_Identity=40.9574468085106, Blast_Score=309, Evalue=4e-85,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=39.1437308868502, Blast_Score=217, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 64883; Mature: 64883

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWFNQLRVTTRLVAGFLVVAVIGAVMGLLGVVNMGRMADWTGKIYNGDLQALKAVQDAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCC
INLVYASRAQIGLLSASTMGERAAEKEQIVKSLGAMDERIRQVAGAFEKAEGKALVKQYQ
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELSPAFRARMEKYVELISKQPLDTSQFESQVFSESAELLKDSHALEAVMFQMVKRRDDRA
HHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNNMEEARSVYDATRLWMLGLVLGGVALSVLLGVLLARALSRQLGGEPGYAAAIAARIAE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
GDFSAPVATRAGDKGSLVYAMQQMQQQLSRMVRDFKVSAESIGSASREIAAGNNDLSQRT
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHH
EQQAAALEQTASSMEELTSTVRQNADNARQASGLAANASETALRGGEVVGRVVQTMDEIN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DASKKIVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSANAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHH
EIKGLIGDTVERVDNGSALVGQAGKTMEEIVQAVKRVTDIMGEISAASAEQSAGIEQVNQ
HHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHH
AVAQMDEGTQQNAALVEEAAAAAGALEEQASRLQGAVATFRLAAEDARADSFVAHSLPAA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TAVPAKVSRAAGAVRAIAAGKRVAKALPASTKAAALPAADHAAAAEAADAVATQPARLVA
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHH
GRASRPALAAADNGDWSAF
CCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MHWFNQLRVTTRLVAGFLVVAVIGAVMGLLGVVNMGRMADWTGKIYNGDLQALKAVQDAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCC
INLVYASRAQIGLLSASTMGERAAEKEQIVKSLGAMDERIRQVAGAFEKAEGKALVKQYQ
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELSPAFRARMEKYVELISKQPLDTSQFESQVFSESAELLKDSHALEAVMFQMVKRRDDRA
HHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNNMEEARSVYDATRLWMLGLVLGGVALSVLLGVLLARALSRQLGGEPGYAAAIAARIAE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
GDFSAPVATRAGDKGSLVYAMQQMQQQLSRMVRDFKVSAESIGSASREIAAGNNDLSQRT
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHH
EQQAAALEQTASSMEELTSTVRQNADNARQASGLAANASETALRGGEVVGRVVQTMDEIN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DASKKIVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSANAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHH
EIKGLIGDTVERVDNGSALVGQAGKTMEEIVQAVKRVTDIMGEISAASAEQSAGIEQVNQ
HHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHH
AVAQMDEGTQQNAALVEEAAAAAGALEEQASRLQGAVATFRLAAEDARADSFVAHSLPAA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TAVPAKVSRAAGAVRAIAAGKRVAKALPASTKAAALPAADHAAAAEAADAVATQPARLVA
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHH
GRASRPALAAADNGDWSAF
CCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]