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The map label for this gene is trg [H]

Identifier: 116694183

GI number: 116694183

Start: 254186

End: 255985

Strand: Direct

Name: trg [H]

Synonym: H16_B0228

Alternate gene names: 116694183

Gene position: 254186-255985 (Clockwise)

Preceding gene: 116694181

Following gene: 116694184

Centisome position: 8.73

GC content: 67.5

Gene sequence:

>1800_bases
GTGCCCCGCGGGTTGACACAGTCTTCTTTCATCATGTCCTTCCACAACAATATCCAGATCAAGACCCTGCTACGGGGCGC
CATGGGAATGCTGTCGCTGCTGCTGTTGCTGGTCGGCGGTGCCGGCCTGCACGGCATTTCACAAAGCAATGATGCCCTCA
GGGAGACTTATGCCCACCAGCTCGGCTCCACCGTCGCGCTCAGCGAGGCGATGCAGGCCACCACGCGCATGCGGCTGGCA
CTGGACCGCAACGTGATGCAGGGCGAGCAGGACGATCCCAAGGTTCACGTCGACCGCTCCAAAGTGTTCGTGGAGGCATC
GGAGGCTGCCTGGAAGCGCTATATGAACCTGCCGCAGAATCCTGAGGAAAAGGCGCTCGCCACGGAGCTGGGCAAGCAGC
GCCAGGCGTTCATGGAGCAGGGCGTGTTGCCGCTGCAGGCGGCTTCGCTCGCGGGCAACCAGGAAGAGGCCCTGCGGCTG
GCGAAGAAGGTGCTGCCTGACCTGCAGCGCAGCATGTCGAGCGTGCACGAGAAGCTGCAGAAGTTCCAGATGACTGCCGG
GCAGGCCAACTTCGATGCTGCGCAGGCCAGCTTTGCGCGTATCCGCATGCTGTCGGTCGTGCTGATCGTGCTGGGCCTGG
CGGTCGCGGTGCTGTGCACGGTCACGCTGAACCGCGCCATCGTCGCGCCGGTGGCAGAGGCGCTGGCTGTGTTCGAGCGC
ATCGCCCGCGGCGACCTGACCTCGCGCATCGCCAGCGTCTCGAAGAACGAGATCGGCCGCATGATGCAGGCGCTGGCCGC
GATGCAGGCCAGCCTGTCGGGCATCGTTGCCGAAGTGCGCACCGGCGCCGATTCGATGGCATCGGCCACGCAGCAGATTT
CCACCGGCAACCTGGACCTGTCGCAGCGCACCGAGGAACAGGCCTCGTCGCTGGAGCAGACCGCCGCCAGCATGGAAGAG
CTGACCACGGTGGTGCGGCAGAATGCCGACAACGCGCGCCAGGCCGGCGTGCTGGCCAATGAGGCTTCGCAGATCGCGCT
CAAGGGCGGCGACGTGGTGGGCCGCGTGGTCGACACCATGAACGAGATCAACGGCGCCTCGCGCAAGGTGGTCGAGATCA
TCAGCGTGATCGAGGGCATTGCCTTCCAGACCAATATCCTGGCGCTCAATGCAGCGGTGGAAGCCGCGCGTGCCGGCGAG
CAGGGCCGCGGCTTCGCGGTGGTGGCGGGCGAGGTGCGCAGCCTGGCGCAGCGCTCGGCCTCGGCCGCCAAGGAGATCGA
GGCGCTGATCGGCGAGTCGGGCCAGCGCGTGGAGAGCGGTACCCGGTTGGTGGCAGAAGCCGGCCAGACCATGGGCGAGA
TCGTCCAGGCCGTGCGCCGCGTGACTGACATCATGAACGAGATCGGCGCCGCGTCGCAGGAACAGACCAGCGGCATCGAG
CAGGTCAACCAGGCGGTGACCCAGATGGACGAGGTGACGCAGCAGAATGCCGCGCTGGTGGAAGAGGCCGCCGCCGCAGC
CGGTGCGCTGGAAGAACAGGCGCAGAAGCTCAAGAACGTGGTCTCGGTGTTCAACCTTGGCACGGGTACGGGAGTAGGGG
CAGGCACGGCCGCGACGGCTGTCGCTGGCAGCACCGCACGCACCATGTCGGTGCGGCCGGCGGCAGCCGCGGCGCATTCG
GCAACCGCGGCGCCGCGTGCCGTTGCTGCCCGCCCGGCCGCGGCGCTTCCGGCAAGCCGTCCGGCGGCGAGGCCCGTGCT
GGCCGTTGCCGGGGCCGATGATGACTGGAGCGCGTTCTAA

Upstream 100 bases:

>100_bases
CCCGCCACCGGCGCGGCGGCTCAAGTAACAGGAGGTCGCGCCGTTATCCGGGCAGGGCGGATCATCTGGGCGTCGATCCT
GCCGGAACGGGGTTGGGGGT

Downstream 100 bases:

>100_bases
ACCACTGTCCCCACCATTGCCCTGTTCACACGGCGACCGCAAGATGCCATGATGCGGGGTTTGCCCCGCGTCCTGACCTT
CTTCGCGCATTCTCTTCATC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MPRGLTQSSFIMSFHNNIQIKTLLRGAMGMLSLLLLLVGGAGLHGISQSNDALRETYAHQLGSTVALSEAMQATTRMRLA
LDRNVMQGEQDDPKVHVDRSKVFVEASEAAWKRYMNLPQNPEEKALATELGKQRQAFMEQGVLPLQAASLAGNQEEALRL
AKKVLPDLQRSMSSVHEKLQKFQMTAGQANFDAAQASFARIRMLSVVLIVLGLAVAVLCTVTLNRAIVAPVAEALAVFER
IARGDLTSRIASVSKNEIGRMMQALAAMQASLSGIVAEVRTGADSMASATQQISTGNLDLSQRTEEQASSLEQTAASMEE
LTTVVRQNADNARQAGVLANEASQIALKGGDVVGRVVDTMNEINGASRKVVEIISVIEGIAFQTNILALNAAVEAARAGE
QGRGFAVVAGEVRSLAQRSASAAKEIEALIGESGQRVESGTRLVAEAGQTMGEIVQAVRRVTDIMNEIGAASQEQTSGIE
QVNQAVTQMDEVTQQNAALVEEAAAAAGALEEQAQKLKNVVSVFNLGTGTGVGAGTAATAVAGSTARTMSVRPAAAAAHS
ATAAPRAVAARPAAALPASRPAARPVLAVAGADDDWSAF

Sequences:

>Translated_599_residues
MPRGLTQSSFIMSFHNNIQIKTLLRGAMGMLSLLLLLVGGAGLHGISQSNDALRETYAHQLGSTVALSEAMQATTRMRLA
LDRNVMQGEQDDPKVHVDRSKVFVEASEAAWKRYMNLPQNPEEKALATELGKQRQAFMEQGVLPLQAASLAGNQEEALRL
AKKVLPDLQRSMSSVHEKLQKFQMTAGQANFDAAQASFARIRMLSVVLIVLGLAVAVLCTVTLNRAIVAPVAEALAVFER
IARGDLTSRIASVSKNEIGRMMQALAAMQASLSGIVAEVRTGADSMASATQQISTGNLDLSQRTEEQASSLEQTAASMEE
LTTVVRQNADNARQAGVLANEASQIALKGGDVVGRVVDTMNEINGASRKVVEIISVIEGIAFQTNILALNAAVEAARAGE
QGRGFAVVAGEVRSLAQRSASAAKEIEALIGESGQRVESGTRLVAEAGQTMGEIVQAVRRVTDIMNEIGAASQEQTSGIE
QVNQAVTQMDEVTQQNAALVEEAAAAAGALEEQAQKLKNVVSVFNLGTGTGVGAGTAATAVAGSTARTMSVRPAAAAAHS
ATAAPRAVAARPAAALPASRPAARPVLAVAGADDDWSAF
>Mature_598_residues
PRGLTQSSFIMSFHNNIQIKTLLRGAMGMLSLLLLLVGGAGLHGISQSNDALRETYAHQLGSTVALSEAMQATTRMRLAL
DRNVMQGEQDDPKVHVDRSKVFVEASEAAWKRYMNLPQNPEEKALATELGKQRQAFMEQGVLPLQAASLAGNQEEALRLA
KKVLPDLQRSMSSVHEKLQKFQMTAGQANFDAAQASFARIRMLSVVLIVLGLAVAVLCTVTLNRAIVAPVAEALAVFERI
ARGDLTSRIASVSKNEIGRMMQALAAMQASLSGIVAEVRTGADSMASATQQISTGNLDLSQRTEEQASSLEQTAASMEEL
TTVVRQNADNARQAGVLANEASQIALKGGDVVGRVVDTMNEINGASRKVVEIISVIEGIAFQTNILALNAAVEAARAGEQ
GRGFAVVAGEVRSLAQRSASAAKEIEALIGESGQRVESGTRLVAEAGQTMGEIVQAVRRVTDIMNEIGAASQEQTSGIEQ
VNQAVTQMDEVTQQNAALVEEAAAAAGALEEQAQKLKNVVSVFNLGTGTGVGAGTAATAVAGSTARTMSVRPAAAAAHSA
TAAPRAVAARPAAALPASRPAARPVLAVAGADDDWSAF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=490, Percent_Identity=45.5102040816327, Blast_Score=343, Evalue=2e-95,
Organism=Escherichia coli, GI1788195, Length=377, Percent_Identity=51.9893899204244, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI2367378, Length=518, Percent_Identity=43.050193050193, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1788194, Length=526, Percent_Identity=43.1558935361217, Blast_Score=308, Evalue=6e-85,
Organism=Escherichia coli, GI1789453, Length=320, Percent_Identity=36.5625, Blast_Score=202, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62707; Mature: 62576

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50885 HAMP ; PS00041 HTH_ARAC_FAMILY_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRGLTQSSFIMSFHNNIQIKTLLRGAMGMLSLLLLLVGGAGLHGISQSNDALRETYAHQ
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LGSTVALSEAMQATTRMRLALDRNVMQGEQDDPKVHVDRSKVFVEASEAAWKRYMNLPQN
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHEEEHHHHHHHHHCCCCCC
PEEKALATELGKQRQAFMEQGVLPLQAASLAGNQEEALRLAKKVLPDLQRSMSSVHEKLQ
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFQMTAGQANFDAAQASFARIRMLSVVLIVLGLAVAVLCTVTLNRAIVAPVAEALAVFER
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARGDLTSRIASVSKNEIGRMMQALAAMQASLSGIVAEVRTGADSMASATQQISTGNLDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
SQRTEEQASSLEQTAASMEELTTVVRQNADNARQAGVLANEASQIALKGGDVVGRVVDTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHCCCHHEEECCCHHHHHHHHHH
NEINGASRKVVEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
SAAKEIEALIGESGQRVESGTRLVAEAGQTMGEIVQAVRRVTDIMNEIGAASQEQTSGIE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QVNQAVTQMDEVTQQNAALVEEAAAAAGALEEQAQKLKNVVSVFNLGTGTGVGAGTAATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VAGSTARTMSVRPAAAAAHSATAAPRAVAARPAAALPASRPAARPVLAVAGADDDWSAF
HCCCCHHEEECCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
PRGLTQSSFIMSFHNNIQIKTLLRGAMGMLSLLLLLVGGAGLHGISQSNDALRETYAHQ
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LGSTVALSEAMQATTRMRLALDRNVMQGEQDDPKVHVDRSKVFVEASEAAWKRYMNLPQN
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHEEEHHHHHHHHHCCCCCC
PEEKALATELGKQRQAFMEQGVLPLQAASLAGNQEEALRLAKKVLPDLQRSMSSVHEKLQ
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFQMTAGQANFDAAQASFARIRMLSVVLIVLGLAVAVLCTVTLNRAIVAPVAEALAVFER
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARGDLTSRIASVSKNEIGRMMQALAAMQASLSGIVAEVRTGADSMASATQQISTGNLDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
SQRTEEQASSLEQTAASMEELTTVVRQNADNARQAGVLANEASQIALKGGDVVGRVVDTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHCCCHHEEECCCHHHHHHHHHH
NEINGASRKVVEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
SAAKEIEALIGESGQRVESGTRLVAEAGQTMGEIVQAVRRVTDIMNEIGAASQEQTSGIE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QVNQAVTQMDEVTQQNAALVEEAAAAAGALEEQAQKLKNVVSVFNLGTGTGVGAGTAATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VAGSTARTMSVRPAAAAAHSATAAPRAVAARPAAALPASRPAARPVLAVAGADDDWSAF
HCCCCHHEEECCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]