| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is cheX [C]
Identifier: 116694184
GI number: 116694184
Start: 256099
End: 258066
Strand: Direct
Name: cheX [C]
Synonym: H16_B0229
Alternate gene names: 116694184
Gene position: 256099-258066 (Clockwise)
Preceding gene: 116694183
Following gene: 116694185
Centisome position: 8.79
GC content: 71.19
Gene sequence:
>1968_bases ATGATTGCCCTGAGTTCCATCCTGTTGCTGCTGGCTGCCCTGCTGGGCGTGGCCGCCGCCCTCGGCGTTCGCGCCGGGCG TGCGGACCAGTCAGCCGGTGGCCGCTCGCTGCGCATGCTGACCTGGTCGGCGGCACTGTTATCGCAGCTGAGCGTAAGCC TGCCCGTACTGGTGGTGATGCTGTCGGGCAGCGTGCCGGCGGCCAACGACACGGCACAGATGGCGGCCAGCTTCGCCGCC GCCGCAGCAGCCACCGCGGCTGCCAAGCTGCTGGTGCAGTGGCTGCGCCAGGGCACGCGGCTGTGGCGCGGTGCGGCGCT CATGGCGGTCGTCGCTGGCGCCGGGCTGGTGGCCGCGGCCGGCACCCACCTGGGCCGCGCCTGTGGCGCGGGCTCGGTCT CGGCGCGCGCCTGCATCGATGCAGCCGGCCTGCCGCACCCCGCCTGGCTGGCGGGCGGGCTGACCGCGCTGTGCGCGCTG ATGTTCGCCGTCCACCGCGCGCAGTCGCGTGGCTTGCTGGCTGCGCACCACGAAGCCGGCCTGGCCGATGAGCTGGTGGA CGAGGCGCACGGCCTGCCGCGCGGGCACGAGCCCCGCCTGGCGCGGCGCGGCGCGCGCATTCCCGGCCGCCCCGGCCGTC TTACCGTGCGTGCCGCAGCGCGCGGGCAGGGCACGGTGGGCGAGTACAGCGTGGCAACGACGATGCCCGACCGCGTCGCC TTCGGCCGCTGGCTGGACCAGACGATCGCGCAGGCGCGGCTGGCCGAGAGCGGCTGCGCCGTGTTGCTGATCCATATTGC CGATTACCGCGAAGTCGACGAGGTCTTCGAGATCCGCGCCGACGATATCCTGGCCCAGGACGCCGGCGCGCTGGCGCAGG CCGTGCTGGAGCCGCATGACTTCCTGGCCCGGCTGGCGCGCGACGAGTTTGCCGTGGGCGTGCCGGAGCTGGTCCATCAT GGCCGCGCGCAGGAACTGGGTTCGCGCATGCTCGGCTCGCTGGCCGAGTTCATCGCCGCGCGCGGCTTGCAGATGCAGAT CGGCGTGAACATCGGCATTGCCATCTACCCGCGCGATGCGCAGACCTCGGAGGCGCTGATGCAGGCCGCGCGCGTCAGCC TGGCCGAGGCCCGCCAGAGCGGCTCGAACCAGGTGCGCCTGTTCAACAGCGCCGCCGGCGAACGCGCGCGCCGCACCCGC GTGATCCGGCGCGACCTGTGGCTGGCGATCCAGGACGACGCACTGTCGCTGCAGTTCCAGCCCAAGTACGATGCGCGCCG GCGCACGCTGGTGGGGGCCGAAGCGCTATGCCGCTGGCGCCATCCCGCGCTGGGCCAGGTGAGCCCGGCCGAGTTCATCA CCGTGGCCGAGCAGTCGGGCCAGATCGACAAGCTCGACGACTGGGTCCTGACCAGCGTCTGCCGCCAGGTGCGCCAGTGG CGGGACGCCGGCGTGCCCACCGTGCCGGTGGCGATCAATGTCTCGGGGCTGCGCTTTGCCAGCCGCAATTTCCCGCAATA CCTGCTCGAGCAGATCCACCAGCACGACATCCCGCCCTCGGCGATCACGCTGGAGATCACCGAGACCGCGGCGATGAAGG ACATCGGCAAGTCGCTGGAAACGCTGGCCGAGCTGCAGTCGCTCGGCATCCAGGTGGCGCTGGACGATTTTGGCAGTGGC TATTCCAGCCTGGGCTATCTCAAGCGCCTGCGCGTGGGCACGCTCAAGATCGACCGCACCCTGATCGGCGGGCTCGACAC CGATGCGCAGGGCCGTGCCATCGTCGGCTCGATGGTGGCGCTGGCGCACGAACTGCGCATGAAGGTGGTGGCCGAGGGCG TTGAATCGGCATCGCAGCTGGAAATCCTCAATGAGATGGGGTGCGACGAGGTGCAGGGTTACCTGCTGTCGCTGCCGCTG GATGCTGCCGGTTTTGCCGATGCCTTGCGCGAGCAGGGCGGCGCCTGA
Upstream 100 bases:
>100_bases CCATTGCCCTGTTCACACGGCGACCGCAAGATGCCATGATGCGGGGTTTGCCCCGCGTCCTGACCTTCTTCGCGCATTCT CTTCATCATCGCGCAGCCCA
Downstream 100 bases:
>100_bases CGGCTAAAGTTTGTCCGTGACGCGGCCGATAACCGGTCTGGCAGGCTGCCAGCGTTTGCGGCGCAGCCCTGCGCCGGCCC GTCCGTCGCCGGCTGCGCTG
Product: signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MIALSSILLLLAALLGVAAALGVRAGRADQSAGGRSLRMLTWSAALLSQLSVSLPVLVVMLSGSVPAANDTAQMAASFAA AAAATAAAKLLVQWLRQGTRLWRGAALMAVVAGAGLVAAAGTHLGRACGAGSVSARACIDAAGLPHPAWLAGGLTALCAL MFAVHRAQSRGLLAAHHEAGLADELVDEAHGLPRGHEPRLARRGARIPGRPGRLTVRAAARGQGTVGEYSVATTMPDRVA FGRWLDQTIAQARLAESGCAVLLIHIADYREVDEVFEIRADDILAQDAGALAQAVLEPHDFLARLARDEFAVGVPELVHH GRAQELGSRMLGSLAEFIAARGLQMQIGVNIGIAIYPRDAQTSEALMQAARVSLAEARQSGSNQVRLFNSAAGERARRTR VIRRDLWLAIQDDALSLQFQPKYDARRRTLVGAEALCRWRHPALGQVSPAEFITVAEQSGQIDKLDDWVLTSVCRQVRQW RDAGVPTVPVAINVSGLRFASRNFPQYLLEQIHQHDIPPSAITLEITETAAMKDIGKSLETLAELQSLGIQVALDDFGSG YSSLGYLKRLRVGTLKIDRTLIGGLDTDAQGRAIVGSMVALAHELRMKVVAEGVESASQLEILNEMGCDEVQGYLLSLPL DAAGFADALREQGGA
Sequences:
>Translated_655_residues MIALSSILLLLAALLGVAAALGVRAGRADQSAGGRSLRMLTWSAALLSQLSVSLPVLVVMLSGSVPAANDTAQMAASFAA AAAATAAAKLLVQWLRQGTRLWRGAALMAVVAGAGLVAAAGTHLGRACGAGSVSARACIDAAGLPHPAWLAGGLTALCAL MFAVHRAQSRGLLAAHHEAGLADELVDEAHGLPRGHEPRLARRGARIPGRPGRLTVRAAARGQGTVGEYSVATTMPDRVA FGRWLDQTIAQARLAESGCAVLLIHIADYREVDEVFEIRADDILAQDAGALAQAVLEPHDFLARLARDEFAVGVPELVHH GRAQELGSRMLGSLAEFIAARGLQMQIGVNIGIAIYPRDAQTSEALMQAARVSLAEARQSGSNQVRLFNSAAGERARRTR VIRRDLWLAIQDDALSLQFQPKYDARRRTLVGAEALCRWRHPALGQVSPAEFITVAEQSGQIDKLDDWVLTSVCRQVRQW RDAGVPTVPVAINVSGLRFASRNFPQYLLEQIHQHDIPPSAITLEITETAAMKDIGKSLETLAELQSLGIQVALDDFGSG YSSLGYLKRLRVGTLKIDRTLIGGLDTDAQGRAIVGSMVALAHELRMKVVAEGVESASQLEILNEMGCDEVQGYLLSLPL DAAGFADALREQGGA >Mature_655_residues MIALSSILLLLAALLGVAAALGVRAGRADQSAGGRSLRMLTWSAALLSQLSVSLPVLVVMLSGSVPAANDTAQMAASFAA AAAATAAAKLLVQWLRQGTRLWRGAALMAVVAGAGLVAAAGTHLGRACGAGSVSARACIDAAGLPHPAWLAGGLTALCAL MFAVHRAQSRGLLAAHHEAGLADELVDEAHGLPRGHEPRLARRGARIPGRPGRLTVRAAARGQGTVGEYSVATTMPDRVA FGRWLDQTIAQARLAESGCAVLLIHIADYREVDEVFEIRADDILAQDAGALAQAVLEPHDFLARLARDEFAVGVPELVHH GRAQELGSRMLGSLAEFIAARGLQMQIGVNIGIAIYPRDAQTSEALMQAARVSLAEARQSGSNQVRLFNSAAGERARRTR VIRRDLWLAIQDDALSLQFQPKYDARRRTLVGAEALCRWRHPALGQVSPAEFITVAEQSGQIDKLDDWVLTSVCRQVRQW RDAGVPTVPVAINVSGLRFASRNFPQYLLEQIHQHDIPPSAITLEITETAAMKDIGKSLETLAELQSLGIQVALDDFGSG YSSLGYLKRLRVGTLKIDRTLIGGLDTDAQGRAIVGSMVALAHELRMKVVAEGVESASQLEILNEMGCDEVQGYLLSLPL DAAGFADALREQGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MHYT domain [H]
Homologues:
Organism=Escherichia coli, GI1787541, Length=415, Percent_Identity=30.1204819277108, Blast_Score=191, Evalue=9e-50, Organism=Escherichia coli, GI87081921, Length=419, Percent_Identity=28.1622911694511, Blast_Score=179, Evalue=5e-46, Organism=Escherichia coli, GI226510982, Length=477, Percent_Identity=27.6729559748428, Blast_Score=167, Evalue=2e-42, Organism=Escherichia coli, GI1790496, Length=235, Percent_Identity=33.6170212765957, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI1788502, Length=251, Percent_Identity=33.0677290836653, Blast_Score=135, Evalue=9e-33, Organism=Escherichia coli, GI87081845, Length=258, Percent_Identity=32.5581395348837, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI87081743, Length=249, Percent_Identity=32.1285140562249, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI87081980, Length=249, Percent_Identity=31.3253012048193, Blast_Score=120, Evalue=4e-28, Organism=Escherichia coli, GI1786507, Length=274, Percent_Identity=29.1970802919708, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1787055, Length=247, Percent_Identity=29.5546558704453, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1788849, Length=364, Percent_Identity=28.2967032967033, Blast_Score=110, Evalue=4e-25, Organism=Escherichia coli, GI87082096, Length=207, Percent_Identity=29.951690821256, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1789650, Length=421, Percent_Identity=21.3776722090261, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787410, Length=131, Percent_Identity=28.2442748091603, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR005330 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]
EC number: NA
Molecular weight: Translated: 69467; Mature: 69467
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS50883 EAL ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALSSILLLLAALLGVAAALGVRAGRADQSAGGRSLRMLTWSAALLSQLSVSLPVLVVM CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH LSGSVPAANDTAQMAASFAAAAAATAAAKLLVQWLRQGTRLWRGAALMAVVAGAGLVAAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GTHLGRACGAGSVSARACIDAAGLPHPAWLAGGLTALCALMFAVHRAQSRGLLAAHHEAG HHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCC LADELVDEAHGLPRGHEPRLARRGARIPGRPGRLTVRAAARGQGTVGEYSVATTMPDRVA CHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHH FGRWLDQTIAQARLAESGCAVLLIHIADYREVDEVFEIRADDILAQDAGALAQAVLEPHD HHHHHHHHHHHHHHHCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH FLARLARDEFAVGVPELVHHGRAQELGSRMLGSLAEFIAARGLQMQIGVNIGIAIYPRDA HHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCC QTSEALMQAARVSLAEARQSGSNQVRLFNSAAGERARRTRVIRRDLWLAIQDDALSLQFQ CHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHEEEEECCCEEEEEC PKYDARRRTLVGAEALCRWRHPALGQVSPAEFITVAEQSGQIDKLDDWVLTSVCRQVRQW CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHH RDAGVPTVPVAINVSGLRFASRNFPQYLLEQIHQHDIPPSAITLEITETAAMKDIGKSLE HHCCCCEEEEEEEECCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHH TLAELQSLGIQVALDDFGSGYSSLGYLKRLRVGTLKIDRTLIGGLDTDAQGRAIVGSMVA HHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHEEECHHHHCCCCCCCCCHHHHHHHHH LAHELRMKVVAEGVESASQLEILNEMGCDEVQGYLLSLPLDAAGFADALREQGGA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure MIALSSILLLLAALLGVAAALGVRAGRADQSAGGRSLRMLTWSAALLSQLSVSLPVLVVM CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH LSGSVPAANDTAQMAASFAAAAAATAAAKLLVQWLRQGTRLWRGAALMAVVAGAGLVAAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GTHLGRACGAGSVSARACIDAAGLPHPAWLAGGLTALCALMFAVHRAQSRGLLAAHHEAG HHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCC LADELVDEAHGLPRGHEPRLARRGARIPGRPGRLTVRAAARGQGTVGEYSVATTMPDRVA CHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHH FGRWLDQTIAQARLAESGCAVLLIHIADYREVDEVFEIRADDILAQDAGALAQAVLEPHD HHHHHHHHHHHHHHHCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH FLARLARDEFAVGVPELVHHGRAQELGSRMLGSLAEFIAARGLQMQIGVNIGIAIYPRDA HHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCC QTSEALMQAARVSLAEARQSGSNQVRLFNSAAGERARRTRVIRRDLWLAIQDDALSLQFQ CHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHEEEEECCCEEEEEC PKYDARRRTLVGAEALCRWRHPALGQVSPAEFITVAEQSGQIDKLDDWVLTSVCRQVRQW CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHH RDAGVPTVPVAINVSGLRFASRNFPQYLLEQIHQHDIPPSAITLEITETAAMKDIGKSLE HHCCCCEEEEEEEECCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHH TLAELQSLGIQVALDDFGSGYSSLGYLKRLRVGTLKIDRTLIGGLDTDAQGRAIVGSMVA HHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHEEECHHHHCCCCCCCCCHHHHHHHHH LAHELRMKVVAEGVESASQLEILNEMGCDEVQGYLLSLPLDAAGFADALREQGGA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]