| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694180
Identifier: 116694180
GI number: 116694180
Start: 251101
End: 252123
Strand: Direct
Name: 116694180
Synonym: H16_B0225
Alternate gene names: NA
Gene position: 251101-252123 (Clockwise)
Preceding gene: 116694177
Following gene: 116694181
Centisome position: 8.62
GC content: 73.02
Gene sequence:
>1023_bases GTGACCACTAAGCCCTCCGCTGCCCATCCTGAACAGGCGGCCTTGTTCGATGCCGACCTGGCCGCCTGGCGCGACCATCC GGAGCGCGCGTTCGACGGCTGGCTGGCACGGCATGGCTTCCGGCACGGCACCAGCGTGGTGTACCGCGCCATGTGGGGCA AGCTGCTGCGCTGGTCGGCCGAGCGCGGGCTGCCGCCGCTGAGCTGGTCGGCGGAGCAGATCGGTGAGTTCCTGGACGCG CAGCAGCTGCACAAATCGCACCGCTATCGCTATACGCGGCTGATCGAACGGGTGTTCCATCACCTGGCGCGGCTGCGCGA GGGCATGCACAACCCGGCCAGCCAGGCGGTGCGCGCCCATCTCGCCGACGGCGAGAACGATCCCACCGCGTTCCTGCTGC CGGGCGAGCGCGACCTGCTGGTGGCGCGGATACTTGGCCCGGCCGGCATGCCGGCCGGCGACACGCGCACCGCGGCATCG CCCACCCAATGGAAGCGCGCCCGCGATGTGGCCCTGCTGGCGGTGCTGCTCGGCGGCGGCCTGAAGGTAGGCGAAGCGCG GGCGCTGCGGGTCGATGCCATCGAAGCCGGCGCCCCCGGCCGGATGGCGCTGCGCATGGTCCGCGCGGACAACGGCCGAG CCTATACCGTGCCGCTGTTCAGCCTGGCCCATGCGCCGCTACGGGCCTGGCTGGCATTGCGCGAAGCCTCCGGCACGCTT GGCGGCCTGGTGTTTCCCGCCATGCCGGCGGGCCGGCCGATGCATGCCGCCTCGGTCTACCGGCGCGTGGAGATCCTGCT GGACGAGGCCGGCGTGCTGGCCGGGCGCAGCGAACGCGCGTCGCCGCAGACGCTGCGCAATACCTGCGCCGCCATGCATT TCGAGGCCGGCACGGCGCCGGCCGAGGTGGCGCAATGCCTGGGCATGCGCGACCCGGAGTCCGGCTGGCGGCTGCGCGCC GCCTATGAGGCCTGGCAGGCGCGGGCGGGGCTGGTGGCGGAAGTGCCGGGAAGCCGGGTCTAG
Upstream 100 bases:
>100_bases ATGCGGGGGCCAATGGTGCCGGCGCCCCGCCGCGCAGTGACGGGTTGTCTACAATAGGCGGGATCCCAACCCCGCACGCC GGCCCCCGGCAGGAGAGTCA
Downstream 100 bases:
>100_bases CCCCGCGCGCCGGGCCGGCTGCCCTGGGCGCATCGGCAGATCGTGGATAATAAGCAGCTTCGCCGGCCTACGCGGCGGAA AGAGGTGCTTGCGCCACGTT
Product: integrase/recombinase protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; Integrase/Recombinase Protein; Phage Integrase; Phage Integrase / Tyr Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Or Site-Specific Recombinase; DNA Integration/Recombination/Inversion Protein
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTTKPSAAHPEQAALFDADLAAWRDHPERAFDGWLARHGFRHGTSVVYRAMWGKLLRWSAERGLPPLSWSAEQIGEFLDA QQLHKSHRYRYTRLIERVFHHLARLREGMHNPASQAVRAHLADGENDPTAFLLPGERDLLVARILGPAGMPAGDTRTAAS PTQWKRARDVALLAVLLGGGLKVGEARALRVDAIEAGAPGRMALRMVRADNGRAYTVPLFSLAHAPLRAWLALREASGTL GGLVFPAMPAGRPMHAASVYRRVEILLDEAGVLAGRSERASPQTLRNTCAAMHFEAGTAPAEVAQCLGMRDPESGWRLRA AYEAWQARAGLVAEVPGSRV
Sequences:
>Translated_340_residues MTTKPSAAHPEQAALFDADLAAWRDHPERAFDGWLARHGFRHGTSVVYRAMWGKLLRWSAERGLPPLSWSAEQIGEFLDA QQLHKSHRYRYTRLIERVFHHLARLREGMHNPASQAVRAHLADGENDPTAFLLPGERDLLVARILGPAGMPAGDTRTAAS PTQWKRARDVALLAVLLGGGLKVGEARALRVDAIEAGAPGRMALRMVRADNGRAYTVPLFSLAHAPLRAWLALREASGTL GGLVFPAMPAGRPMHAASVYRRVEILLDEAGVLAGRSERASPQTLRNTCAAMHFEAGTAPAEVAQCLGMRDPESGWRLRA AYEAWQARAGLVAEVPGSRV >Mature_339_residues TTKPSAAHPEQAALFDADLAAWRDHPERAFDGWLARHGFRHGTSVVYRAMWGKLLRWSAERGLPPLSWSAEQIGEFLDAQ QLHKSHRYRYTRLIERVFHHLARLREGMHNPASQAVRAHLADGENDPTAFLLPGERDLLVARILGPAGMPAGDTRTAASP TQWKRARDVALLAVLLGGGLKVGEARALRVDAIEAGAPGRMALRMVRADNGRAYTVPLFSLAHAPLRAWLALREASGTLG GLVFPAMPAGRPMHAASVYRRVEILLDEAGVLAGRSERASPQTLRNTCAAMHFEAGTAPAEVAQCLGMRDPESGWRLRAA YEAWQARAGLVAEVPGSRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37106; Mature: 36975
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKPSAAHPEQAALFDADLAAWRDHPERAFDGWLARHGFRHGTSVVYRAMWGKLLRWSA CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ERGLPPLSWSAEQIGEFLDAQQLHKSHRYRYTRLIERVFHHLARLREGMHNPASQAVRAH HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LADGENDPTAFLLPGERDLLVARILGPAGMPAGDTRTAASPTQWKRARDVALLAVLLGGG HCCCCCCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC LKVGEARALRVDAIEAGAPGRMALRMVRADNGRAYTVPLFSLAHAPLRAWLALREASGTL CEECCCCEEEEEEECCCCCHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCC GGLVFPAMPAGRPMHAASVYRRVEILLDEAGVLAGRSERASPQTLRNTCAAMHFEAGTAP CCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCH AEVAQCLGMRDPESGWRLRAAYEAWQARAGLVAEVPGSRV HHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure TTKPSAAHPEQAALFDADLAAWRDHPERAFDGWLARHGFRHGTSVVYRAMWGKLLRWSA CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ERGLPPLSWSAEQIGEFLDAQQLHKSHRYRYTRLIERVFHHLARLREGMHNPASQAVRAH HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LADGENDPTAFLLPGERDLLVARILGPAGMPAGDTRTAASPTQWKRARDVALLAVLLGGG HCCCCCCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC LKVGEARALRVDAIEAGAPGRMALRMVRADNGRAYTVPLFSLAHAPLRAWLALREASGTL CEECCCCEEEEEEECCCCCHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCC GGLVFPAMPAGRPMHAASVYRRVEILLDEAGVLAGRSERASPQTLRNTCAAMHFEAGTAP CCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCH AEVAQCLGMRDPESGWRLRAAYEAWQARAGLVAEVPGSRV HHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA