Click here to switch to the map view.

The map label for this gene is 116694177

Identifier: 116694177

GI number: 116694177

Start: 248798

End: 249346

Strand: Direct

Name: 116694177

Synonym: H16_B0222

Alternate gene names: NA

Gene position: 248798-249346 (Clockwise)

Preceding gene: 116694175

Following gene: 116694180

Centisome position: 8.54

GC content: 65.76

Gene sequence:

>549_bases
ATGTCGACCCAGCACGCCTTGTTGATTTCCCTGATCGAAAAACCGTCGTCCGGTTATGACCTGGCGCGGCGCTTTGACCG
TTCCATCGGCTATTTCTGGCATGCCACGCACCAGCAGATTTATCGCGAGCTGGGGCGGATGGCTGACAGTGGCTGGATTG
CCGCGGATGAAACCGAGGCGGCGGAAGGCGAGGCCGGTGGCGGCGACCGCAAGAACCGCAAGAAGGTCTACCGGGTGTTG
CCGGCCGGCCGTGAAGAACTGGCACGCTGGGTGCTGACCCCCGGCGCCAGCCTGGATCAGCGCGAGGAAATCCTGGTCAA
GCTGCGCGCCGATGCGGTGATCGGGCCGCTTGGCCTCGGTGACGAGATGCGTCGGCTGATCGCGCTGCATCGGGCCCGGC
TGGAGACTTACCTGGCCATCGAGCGGCGCGATTTCTCGACGCCGGACATGGACCGCGCGCAACAGCTGCGCTATGCGCTG
CTGCAGCGCGGCATCCGCTTCGAGCAGGACTGGGTGGCCTGGGGCGAGGAACTGCTGCCGCTGCTGTAG

Upstream 100 bases:

>100_bases
GCCCCGCGAAGTGCGGCTACCGGCGCGTCCCGGTTCCGGGTCTGCCGCATCCGCTTCCAACCATTTTCCATCGCCCCCCG
ACGGGCCACTGCCCAGACGC

Downstream 100 bases:

>100_bases
CCGCGCCCGCTTGGGCGGCGGCTACGGCCTGCCAGGCCAGCTGACCGGCTGCGTCAGGCCAGGTCGACGGCGCGCGTGCC
GGCCTGCTTGGCCTCGCCCA

Product: transcriptional regulator

Products: NA

Alternate protein names: PadR-Like Family Transcriptional Regulator; PadR Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; Transcriptional Repressor PadR; Transcriptional Regulatory Protein; Padr Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Protein; Transcription Regulator Padr-Like; PadR Family Regulatory Protein; Transcriptional Regulator PadR Family; Transcriptional Repressor

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSTQHALLISLIEKPSSGYDLARRFDRSIGYFWHATHQQIYRELGRMADSGWIAADETEAAEGEAGGGDRKNRKKVYRVL
PAGREELARWVLTPGASLDQREEILVKLRADAVIGPLGLGDEMRRLIALHRARLETYLAIERRDFSTPDMDRAQQLRYAL
LQRGIRFEQDWVAWGEELLPLL

Sequences:

>Translated_182_residues
MSTQHALLISLIEKPSSGYDLARRFDRSIGYFWHATHQQIYRELGRMADSGWIAADETEAAEGEAGGGDRKNRKKVYRVL
PAGREELARWVLTPGASLDQREEILVKLRADAVIGPLGLGDEMRRLIALHRARLETYLAIERRDFSTPDMDRAQQLRYAL
LQRGIRFEQDWVAWGEELLPLL
>Mature_181_residues
STQHALLISLIEKPSSGYDLARRFDRSIGYFWHATHQQIYRELGRMADSGWIAADETEAAEGEAGGGDRKNRKKVYRVLP
AGREELARWVLTPGASLDQREEILVKLRADAVIGPLGLGDEMRRLIALHRARLETYLAIERRDFSTPDMDRAQQLRYALL
QRGIRFEQDWVAWGEELLPLL

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20859; Mature: 20728

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQHALLISLIEKPSSGYDLARRFDRSIGYFWHATHQQIYRELGRMADSGWIAADETEA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
AEGEAGGGDRKNRKKVYRVLPAGREELARWVLTPGASLDQREEILVKLRADAVIGPLGLG
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
DEMRRLIALHRARLETYLAIERRDFSTPDMDRAQQLRYALLQRGIRFEQDWVAWGEELLP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
LL
CC
>Mature Secondary Structure 
STQHALLISLIEKPSSGYDLARRFDRSIGYFWHATHQQIYRELGRMADSGWIAADETEA
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
AEGEAGGGDRKNRKKVYRVLPAGREELARWVLTPGASLDQREEILVKLRADAVIGPLGLG
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
DEMRRLIALHRARLETYLAIERRDFSTPDMDRAQQLRYALLQRGIRFEQDWVAWGEELLP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
LL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA