| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is 116694170
Identifier: 116694170
GI number: 116694170
Start: 242584
End: 243552
Strand: Direct
Name: 116694170
Synonym: H16_B0215
Alternate gene names: NA
Gene position: 242584-243552 (Clockwise)
Preceding gene: 116694169
Following gene: 116694171
Centisome position: 8.33
GC content: 68.52
Gene sequence:
>969_bases ATGAAGACATGGATCGCCGGCGCACTCGCCGGCCTGGCCACGGTGGCGGCAGTAACGGGCAATGCCTGGGCGCAGGACAC ACGGCCGGTGCGGCTGATGGTGGGTGCAGCGCCCGGCGGCGGCACCGACGTGATGGCGCGCATCGTCTCCGACAAGCTCG CCGCGCAGCTGAAGCAGCCAGTCGTGGTCGACAACCGCCCCGGCGCGTCCAACACCATTGCCGCGGATTTGACCGCCAAG GCGGCGCCGGACGGCAATACGCTGCTGATGGGCGTGGTGACCTCGCAAGCGATCGCGCCGCACCTGCTCAAGCTGCAGTT CGATCCGCTCAAGGACCTGGCGCCGGTGGCGCTGGTGTCGTCGGTGCCCAATGTGCTGGTGGTCAACAACCAGGTGCAGG CGCGCGACGTCAAGGCGCTGGTGGCGCAGATCCAGGCCAACCCGGACAAGTTCCGCTACAGCTCGTCCGGGGTCGGCAGC ACCCAGCACCTGGCCGGCGCGTCCTTCGCGCGGCAGATCAAGGGCAAGCTGCTGCACGTGCCGTACAAGAGCAGCAGCAG CGCGCTGGTGGACCTGATGGGCGGGCAGGTGGACATGAGCTTCGAGACCATGCCGTCGGTCATCAGCCATATCAAGGCCG GCAAGCTGCGCGCGCTGGCGGTCACCGCGGACCAGCGCTCGGCGCTGCTGCCCAACGTGCCCACGCTGGCTGAAGCGGGC GTGCCCGGCATCCAGATGAGTGCATGGTACGGTGTCTATGCGCCGGCCGGCACGGCGCCCACGACACTGCAGAAGCTGGG CAACGCGCTGGCCACGGTGATCAGGGACCCTGACACCGTGCGCCGGCTGGCCGATGTGGGCGCGGTGCCCGGCGCGCTGA CCGCGGCGCAGTTCGATGCCTTCTCGCGTGCCGAGTATGTGCGCTATGGCAAGCTGATCGCTGAACTGGGCGTCAAGCTC GACCAATAA
Upstream 100 bases:
>100_bases ATCGCCAGTTCAAAAAACATCAGTAGTGGCGAATCACTGATGCTCCTATAGTCTGCCCATCCGCGCCGCAGAGCCGGACA GCAAAACGACGGAGACAGCA
Downstream 100 bases:
>100_bases CAACCCCGGAAGTCCAATGAATTCCCGTCCAAGAATCGCCATGGTGCTGGGCGACCCCGCCGGCATCGGCCCCGAACTGA TCGCCAGGCTGCTGGCCGAC
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKTWIAGALAGLATVAAVTGNAWAQDTRPVRLMVGAAPGGGTDVMARIVSDKLAAQLKQPVVVDNRPGASNTIAADLTAK AAPDGNTLLMGVVTSQAIAPHLLKLQFDPLKDLAPVALVSSVPNVLVVNNQVQARDVKALVAQIQANPDKFRYSSSGVGS TQHLAGASFARQIKGKLLHVPYKSSSSALVDLMGGQVDMSFETMPSVISHIKAGKLRALAVTADQRSALLPNVPTLAEAG VPGIQMSAWYGVYAPAGTAPTTLQKLGNALATVIRDPDTVRRLADVGAVPGALTAAQFDAFSRAEYVRYGKLIAELGVKL DQ
Sequences:
>Translated_322_residues MKTWIAGALAGLATVAAVTGNAWAQDTRPVRLMVGAAPGGGTDVMARIVSDKLAAQLKQPVVVDNRPGASNTIAADLTAK AAPDGNTLLMGVVTSQAIAPHLLKLQFDPLKDLAPVALVSSVPNVLVVNNQVQARDVKALVAQIQANPDKFRYSSSGVGS TQHLAGASFARQIKGKLLHVPYKSSSSALVDLMGGQVDMSFETMPSVISHIKAGKLRALAVTADQRSALLPNVPTLAEAG VPGIQMSAWYGVYAPAGTAPTTLQKLGNALATVIRDPDTVRRLADVGAVPGALTAAQFDAFSRAEYVRYGKLIAELGVKL DQ >Mature_322_residues MKTWIAGALAGLATVAAVTGNAWAQDTRPVRLMVGAAPGGGTDVMARIVSDKLAAQLKQPVVVDNRPGASNTIAADLTAK AAPDGNTLLMGVVTSQAIAPHLLKLQFDPLKDLAPVALVSSVPNVLVVNNQVQARDVKALVAQIQANPDKFRYSSSGVGS TQHLAGASFARQIKGKLLHVPYKSSSSALVDLMGGQVDMSFETMPSVISHIKAGKLRALAVTADQRSALLPNVPTLAEAG VPGIQMSAWYGVYAPAGTAPTTLQKLGNALATVIRDPDTVRRLADVGAVPGALTAAQFDAFSRAEYVRYGKLIAELGVKL DQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33431; Mature: 33431
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWIAGALAGLATVAAVTGNAWAQDTRPVRLMVGAAPGGGTDVMARIVSDKLAAQLKQP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC VVVDNRPGASNTIAADLTAKAAPDGNTLLMGVVTSQAIAPHLLKLQFDPLKDLAPVALVS EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHEEEECCCCHHHHHHHHHH SVPNVLVVNNQVQARDVKALVAQIQANPDKFRYSSSGVGSTQHLAGASFARQIKGKLLHV CCCCEEEECCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEE PYKSSSSALVDLMGGQVDMSFETMPSVISHIKAGKLRALAVTADQRSALLPNVPTLAEAG CCCCCCCHHHHHCCCEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHCC VPGIQMSAWYGVYAPAGTAPTTLQKLGNALATVIRDPDTVRRLADVGAVPGALTAAQFDA CCCEEEECEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH FSRAEYVRYGKLIAELGVKLDQ HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTWIAGALAGLATVAAVTGNAWAQDTRPVRLMVGAAPGGGTDVMARIVSDKLAAQLKQP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC VVVDNRPGASNTIAADLTAKAAPDGNTLLMGVVTSQAIAPHLLKLQFDPLKDLAPVALVS EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHEEEECCCCHHHHHHHHHH SVPNVLVVNNQVQARDVKALVAQIQANPDKFRYSSSGVGSTQHLAGASFARQIKGKLLHV CCCCEEEECCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEE PYKSSSSALVDLMGGQVDMSFETMPSVISHIKAGKLRALAVTADQRSALLPNVPTLAEAG CCCCCCCHHHHHCCCEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHCC VPGIQMSAWYGVYAPAGTAPTTLQKLGNALATVIRDPDTVRRLADVGAVPGALTAAQFDA CCCEEEECEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH FSRAEYVRYGKLIAELGVKLDQ HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]