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The map label for this gene is cpaC2 [C]

Identifier: 116694140

GI number: 116694140

Start: 208717

End: 210129

Strand: Direct

Name: cpaC2 [C]

Synonym: H16_B0185

Alternate gene names: 116694140

Gene position: 208717-210129 (Clockwise)

Preceding gene: 116694139

Following gene: 116694141

Centisome position: 7.17

GC content: 67.94

Gene sequence:

>1413_bases
ATGCATATCCAGAAGAAACCAGCCCATTCGACGGCCCTGCGCCGCAGGCTGATGCAACTCGCGCTGGCCGCGATGCTGGC
CACTACCGCGTGGTGCGCACTGGCGCCGCGCGCACAGGCGCAGGAAGCCGTGAACGCGCGCCAGTTGCGCCTGCTGGCCG
GCGCGCAGAAAGAGATCCGCAGCGCGCAACCGGTGGAACGCGTCGCGGTGGGCAACCCGGCGGTGGCCGACGCGCTGGTG
CTGCGCACGCGCGGTGCCCCCAGCGTGCTGCTGGTGGCCAAGCAACCTGGCGTGACCGACGTGATGGTGTGGACGCGCGG
CGGCGCCGAGCCGCTGACCTACAACGTGCAGGTCGATGCCATCGCGCCCGATGCCGATGGCGCCAAGCTTGGCTATTCCG
CCGCCGGTGCCACCATCACCGGGCAGTCGCCCGATGCCTATGCCGCGGCGCGCGCGCAGGCAGCGGCGCGCGCGGCCACC
ACCGGCAAGACCGATGGCAAGCCCGGCCTGGTGGTGGATCGCTCTACCGTGCCGCTCTCCGGTACCGTGCAGGTCGACGT
CAAGGTGGTGGAGATCAGCAAGACCGTGCTCAAGGAAGTCGGTATCAACTTCTTCCGCAACAACTCCGGCTTTGCCTTCG
GCACGTTCTCGCCATCGACGCTGAACAAGTTCACCTTTACGCCCGGCAGCGGCGGCGCACCGGGCAGTTTCAGTGCCGAC
ATCGCGTCGCCGATGAGCAATGCCTTCAACCTGGTGGCCGCGTCGCTGACACACGGTATCTTCGCCAATATCAGCCTGCT
GGAGGCCAACGGCCTGGCGCGCGTGCTGGCCGAGCCCAGCCTGGTGGCGCTGTCCGGCCAGAGTGCCAGCTTCCTGGCCG
GCGGCGAGATCCCGATCCCGGTGCCGCAGGCGCTGGGCACGACCACGATCCAGTTCAAGCCATTCGGCATCGGGCTGACG
GTGTCGCCCACGGTGCTGTCGGCCGACCGCATCGCGCTGAAGGTGGCGCCGGAGGCGAGCGACCTCGACCCCTCGCGCGG
CATCTCGATCAATGGCGCGGTGGTGCCCGCCATCGTCACGCGGCGCGCCGACACCACGGTGGAACTGGGTGACGGCGAGA
GCTTCGTGATCGGCGGGCTGGTCAGCCGCAACACCGTCAGCAACGTCAACAAGGTCCCGGTGCTGGGCGACCTGCCGGTG
ATCGGTGCCTTCTTCAAGAACCTGAATTTCCACCAGGAAGACCGTGAGCTGATGATCGTGGTCACGCCGCGCCTGGTGAA
GCCGCTGGCCAAGGGCGCGCCGGCGGCGCAAGCCGTTGGTGCCGATGGCCGCACCAACGGCAACCCCAATGTATGGGGCT
GGTATGTGCTGGGCGAATACGCGGACCCGACTTTGCCGGGTTTCTCAAAATAG

Upstream 100 bases:

>100_bases
GCCGCGCCGCCCGCGCCAGCCCAGGCGAGACAAAGCGCAGGCGTGGAAGTCATTCGCGCGGGCAAGCGCGAGATCGAATA
AGAACGTGGGCGCCGACTTT

Downstream 100 bases:

>100_bases
CCGCCGGCCGTGCCGGCAGGCATGGCCAACAGCTTGAGGCGGAGAGATGGATTATTTTCTGTTGCACGCAACGCAGGACG
AAGTGAAGGACTGGCTGGGC

Product: flp pilus assembly protein, secretin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MHIQKKPAHSTALRRRLMQLALAAMLATTAWCALAPRAQAQEAVNARQLRLLAGAQKEIRSAQPVERVAVGNPAVADALV
LRTRGAPSVLLVAKQPGVTDVMVWTRGGAEPLTYNVQVDAIAPDADGAKLGYSAAGATITGQSPDAYAAARAQAAARAAT
TGKTDGKPGLVVDRSTVPLSGTVQVDVKVVEISKTVLKEVGINFFRNNSGFAFGTFSPSTLNKFTFTPGSGGAPGSFSAD
IASPMSNAFNLVAASLTHGIFANISLLEANGLARVLAEPSLVALSGQSASFLAGGEIPIPVPQALGTTTIQFKPFGIGLT
VSPTVLSADRIALKVAPEASDLDPSRGISINGAVVPAIVTRRADTTVELGDGESFVIGGLVSRNTVSNVNKVPVLGDLPV
IGAFFKNLNFHQEDRELMIVVTPRLVKPLAKGAPAAQAVGADGRTNGNPNVWGWYVLGEYADPTLPGFSK

Sequences:

>Translated_470_residues
MHIQKKPAHSTALRRRLMQLALAAMLATTAWCALAPRAQAQEAVNARQLRLLAGAQKEIRSAQPVERVAVGNPAVADALV
LRTRGAPSVLLVAKQPGVTDVMVWTRGGAEPLTYNVQVDAIAPDADGAKLGYSAAGATITGQSPDAYAAARAQAAARAAT
TGKTDGKPGLVVDRSTVPLSGTVQVDVKVVEISKTVLKEVGINFFRNNSGFAFGTFSPSTLNKFTFTPGSGGAPGSFSAD
IASPMSNAFNLVAASLTHGIFANISLLEANGLARVLAEPSLVALSGQSASFLAGGEIPIPVPQALGTTTIQFKPFGIGLT
VSPTVLSADRIALKVAPEASDLDPSRGISINGAVVPAIVTRRADTTVELGDGESFVIGGLVSRNTVSNVNKVPVLGDLPV
IGAFFKNLNFHQEDRELMIVVTPRLVKPLAKGAPAAQAVGADGRTNGNPNVWGWYVLGEYADPTLPGFSK
>Mature_470_residues
MHIQKKPAHSTALRRRLMQLALAAMLATTAWCALAPRAQAQEAVNARQLRLLAGAQKEIRSAQPVERVAVGNPAVADALV
LRTRGAPSVLLVAKQPGVTDVMVWTRGGAEPLTYNVQVDAIAPDADGAKLGYSAAGATITGQSPDAYAAARAQAAARAAT
TGKTDGKPGLVVDRSTVPLSGTVQVDVKVVEISKTVLKEVGINFFRNNSGFAFGTFSPSTLNKFTFTPGSGGAPGSFSAD
IASPMSNAFNLVAASLTHGIFANISLLEANGLARVLAEPSLVALSGQSASFLAGGEIPIPVPQALGTTTIQFKPFGIGLT
VSPTVLSADRIALKVAPEASDLDPSRGISINGAVVPAIVTRRADTTVELGDGESFVIGGLVSRNTVSNVNKVPVLGDLPV
IGAFFKNLNFHQEDRELMIVVTPRLVKPLAKGAPAAQAVGADGRTNGNPNVWGWYVLGEYADPTLPGFSK

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=249, Percent_Identity=30.5220883534137, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87082242, Length=199, Percent_Identity=30.1507537688442, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 48623; Mature: 48623

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIQKKPAHSTALRRRLMQLALAAMLATTAWCALAPRAQAQEAVNARQLRLLAGAQKEIR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH
SAQPVERVAVGNPAVADALVLRTRGAPSVLLVAKQPGVTDVMVWTRGGAEPLTYNVQVDA
CCCCHHHHHCCCCHHHHEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEE
IAPDADGAKLGYSAAGATITGQSPDAYAAARAQAAARAATTGKTDGKPGLVVDRSTVPLS
ECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
GTVQVDVKVVEISKTVLKEVGINFFRNNSGFAFGTFSPSTLNKFTFTPGSGGAPGSFSAD
CEEEEEEEEEEHHHHHHHHHCCEEEECCCCEEEECCCCCCCCEEEECCCCCCCCCCCCHH
IASPMSNAFNLVAASLTHGIFANISLLEANGLARVLAEPSLVALSGQSASFLAGGEIPIP
HHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCEEEEECCCCEEEECCCCCCC
VPQALGTTTIQFKPFGIGLTVSPTVLSADRIALKVAPEASDLDPSRGISINGAVVPAIVT
CCHHCCCEEEEEEEEEECEEECCCEEECCEEEEEECCCCCCCCCCCCEEECCEEEEHEEE
RRADTTVELGDGESFVIGGLVSRNTVSNVNKVPVLGDLPVIGAFFKNLNFHQEDRELMIV
CCCCCEEEECCCCEEEEECEECCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCEEEEE
VTPRLVKPLAKGAPAAQAVGADGRTNGNPNVWGWYVLGEYADPTLPGFSK
ECCHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MHIQKKPAHSTALRRRLMQLALAAMLATTAWCALAPRAQAQEAVNARQLRLLAGAQKEIR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH
SAQPVERVAVGNPAVADALVLRTRGAPSVLLVAKQPGVTDVMVWTRGGAEPLTYNVQVDA
CCCCHHHHHCCCCHHHHEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEE
IAPDADGAKLGYSAAGATITGQSPDAYAAARAQAAARAATTGKTDGKPGLVVDRSTVPLS
ECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
GTVQVDVKVVEISKTVLKEVGINFFRNNSGFAFGTFSPSTLNKFTFTPGSGGAPGSFSAD
CEEEEEEEEEEHHHHHHHHHCCEEEECCCCEEEECCCCCCCCEEEECCCCCCCCCCCCHH
IASPMSNAFNLVAASLTHGIFANISLLEANGLARVLAEPSLVALSGQSASFLAGGEIPIP
HHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCEEEEECCCCEEEECCCCCCC
VPQALGTTTIQFKPFGIGLTVSPTVLSADRIALKVAPEASDLDPSRGISINGAVVPAIVT
CCHHCCCEEEEEEEEEECEEECCCEEECCEEEEEECCCCCCCCCCCCEEECCEEEEHEEE
RRADTTVELGDGESFVIGGLVSRNTVSNVNKVPVLGDLPVIGAFFKNLNFHQEDRELMIV
CCCCCEEEECCCCEEEEECEECCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCEEEEE
VTPRLVKPLAKGAPAAQAVGADGRTNGNPNVWGWYVLGEYADPTLPGFSK
ECCHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]