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The map label for this gene is cpaB2

Identifier: 116694139

GI number: 116694139

Start: 207744

End: 208697

Strand: Direct

Name: cpaB2

Synonym: H16_B0184

Alternate gene names: NA

Gene position: 207744-208697 (Clockwise)

Preceding gene: 116694138

Following gene: 116694140

Centisome position: 7.13

GC content: 72.33

Gene sequence:

>954_bases
ATGACCAGCAAGCAGATCCGACTTCTGGCGGTGGTGCTGCTTGGCCTGGCGCTGCTGCTTGCGCTGCTGGCGTGGCAAGT
GGGCCGCCAGCCGGCACAGGCGCCCGCGGCATCGACATCCGCCAAACCGCTGCACGCAGTGGTGGTGACCACGCAAGCGG
TGGAGGCGGGCAAGCCGCTTGCCGCCGAGGCGCTCAAGGTCGAGATGCTCCCGATCGATCCCACCGGCGCCTACAGCGAG
GTGGCACGCGTGACCGGGCAGGTGCCGCTGGTGGCGCTTGGCGCCAACGTGCCGGTGCTCGAAAGCCAGTTGCTGGCTGG
CCTGGCCACGCAGGTGCGGGAGGGCGAACGCGCGGTGGCCGTGTCAGTCGATGAAGTCATCGGCGTCGGCAACCAGGTGC
AGCCGGGCGACTATGTCGATGTCTTCCTGGTGCTGCGCCGCGACCAGCAGGAGATCCCGGAAAGCCAGGCGCGCATGCTG
CTGTCGCGCCTGCGCGTGCTGGCCTACGGCGTCGCCTCGGTCAACCGGCCGCAGAACGCCAAGCCGGAACAGATGATGGC
GCGACAGGAGGGCGCCAAGACCGCGGTGCTGTCGGTGCCGCTGGAGCAGGTCAGCCGGCTGGCGATGGCGCAGCAGTCCG
GGCGCCTGCTGCTGGCGCTGCGCAATCCGCAGGACGAAGCCATGCCCAGCGACGGCATGTTTGCCGAACCCCCGCCCGCG
CTGGCCGCGCGCGCCGGCGTTCCCGCCGAAGCGCCGCGCGCGGCCCCCGACAAGGCCATGGCCGGCGTGATGCTGTCCGG
CCTGGCCGCCCCCGCCGGCGCCTCTGCCCCGCGCGCGCCGGTGGCAGCGCCGGCGCCGCGGCCGCTGCAGGTTGCCGCGC
CGCCCGCGCCAGCCCAGGCGAGACAAAGCGCAGGCGTGGAAGTCATTCGCGCGGGCAAGCGCGAGATCGAATAA

Upstream 100 bases:

>100_bases
CTGCAACGCTGTCAGGCTCGGCAATGGTCCAGCTTTCTCCTGATATCTGAGCCGCCATGCCCCAACGCCCCCACGCCATG
CCCATCCAAAGGAATCCCGC

Downstream 100 bases:

>100_bases
GAACGTGGGCGCCGACTTTATGCATATCCAGAAGAAACCAGCCCATTCGACGGCCCTGCGCCGCAGGCTGATGCAACTCG
CGCTGGCCGCGATGCTGGCC

Product: flp pilus assembly protein CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; CpaB Family Flp Pilus Assembly Protein; Flp Pilus Assembly Protein; Pilus Assembly Protein; Pilus Assembly Protein CpaB; Flp Pilus Assembly; Pilus Assembly Protein Cpab; Pilus Assembly Transmembrane Protein; Signal Peptide Protein; Flp Type Pilus Assembly Protein; Flp Pilus Assembly Protein RcpC/CpaB; Signal Peptide Protein CpaB Like Protein; CpaB Pilus Assembly Protein; Signal Peptide Protein CpaB Like; Flp Pilus Assembly Protein CpaB-Like Protein; Transmembrane Fimbriae Assembly Protein

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MTSKQIRLLAVVLLGLALLLALLAWQVGRQPAQAPAASTSAKPLHAVVVTTQAVEAGKPLAAEALKVEMLPIDPTGAYSE
VARVTGQVPLVALGANVPVLESQLLAGLATQVREGERAVAVSVDEVIGVGNQVQPGDYVDVFLVLRRDQQEIPESQARML
LSRLRVLAYGVASVNRPQNAKPEQMMARQEGAKTAVLSVPLEQVSRLAMAQQSGRLLLALRNPQDEAMPSDGMFAEPPPA
LAARAGVPAEAPRAAPDKAMAGVMLSGLAAPAGASAPRAPVAAPAPRPLQVAAPPAPAQARQSAGVEVIRAGKREIE

Sequences:

>Translated_317_residues
MTSKQIRLLAVVLLGLALLLALLAWQVGRQPAQAPAASTSAKPLHAVVVTTQAVEAGKPLAAEALKVEMLPIDPTGAYSE
VARVTGQVPLVALGANVPVLESQLLAGLATQVREGERAVAVSVDEVIGVGNQVQPGDYVDVFLVLRRDQQEIPESQARML
LSRLRVLAYGVASVNRPQNAKPEQMMARQEGAKTAVLSVPLEQVSRLAMAQQSGRLLLALRNPQDEAMPSDGMFAEPPPA
LAARAGVPAEAPRAAPDKAMAGVMLSGLAAPAGASAPRAPVAAPAPRPLQVAAPPAPAQARQSAGVEVIRAGKREIE
>Mature_316_residues
TSKQIRLLAVVLLGLALLLALLAWQVGRQPAQAPAASTSAKPLHAVVVTTQAVEAGKPLAAEALKVEMLPIDPTGAYSEV
ARVTGQVPLVALGANVPVLESQLLAGLATQVREGERAVAVSVDEVIGVGNQVQPGDYVDVFLVLRRDQQEIPESQARMLL
SRLRVLAYGVASVNRPQNAKPEQMMARQEGAKTAVLSVPLEQVSRLAMAQQSGRLLLALRNPQDEAMPSDGMFAEPPPAL
AARAGVPAEAPRAAPDKAMAGVMLSGLAAPAGASAPRAPVAAPAPRPLQVAAPPAPAQARQSAGVEVIRAGKREIE

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32875; Mature: 32743

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKQIRLLAVVLLGLALLLALLAWQVGRQPAQAPAASTSAKPLHAVVVTTQAVEAGKPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCH
AAEALKVEMLPIDPTGAYSEVARVTGQVPLVALGANVPVLESQLLAGLATQVREGERAVA
HHHHEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE
VSVDEVIGVGNQVQPGDYVDVFLVLRRDQQEIPESQARMLLSRLRVLAYGVASVNRPQNA
EEHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
KPEQMMARQEGAKTAVLSVPLEQVSRLAMAQQSGRLLLALRNPQDEAMPSDGMFAEPPPA
CHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCCCCCHH
LAARAGVPAEAPRAAPDKAMAGVMLSGLAAPAGASAPRAPVAAPAPRPLQVAAPPAPAQA
HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHH
RQSAGVEVIRAGKREIE
HHHCCHHHHHCCHHCCC
>Mature Secondary Structure 
TSKQIRLLAVVLLGLALLLALLAWQVGRQPAQAPAASTSAKPLHAVVVTTQAVEAGKPL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCH
AAEALKVEMLPIDPTGAYSEVARVTGQVPLVALGANVPVLESQLLAGLATQVREGERAVA
HHHHEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE
VSVDEVIGVGNQVQPGDYVDVFLVLRRDQQEIPESQARMLLSRLRVLAYGVASVNRPQNA
EEHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
KPEQMMARQEGAKTAVLSVPLEQVSRLAMAQQSGRLLLALRNPQDEAMPSDGMFAEPPPA
CHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCCCCCHH
LAARAGVPAEAPRAAPDKAMAGVMLSGLAAPAGASAPRAPVAAPAPRPLQVAAPPAPAQA
HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHH
RQSAGVEVIRAGKREIE
HHHCCHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA